iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2205__AT2G40830.1	fgenesh2_kg.4__2205__AT2G40830.1	fgenesh2_kg.4__2205__AT2G40830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-07	31.8	192	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+++f   ++  + +pC+H++h dC+  w        ++ +CP+Cr
   Q: 192  CPVCKDEFelgSE-AKQMPCNHIYHSDCIVPW------LVQHNSCPVCR 233
           ********77544.889***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSSRNTHWC HRCQRAVQLH GQDPVCSYCG GGFVEELDMA EASPFDMFRA HSHRGVVERD 60
PTFDLMDAFS AFMRNRLAER SHDREIRGRT ISSGPENFPG LAPLLIFGGQ VPYRLSGDNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATTCTTCT AGAGTCAGTC CTTCTTCGTC ATCGTCTTCT TCCCCCAAAT CCTCTCGCTC 60
TAGGGTTTCT CCTCTCGATC CATTATTCTA GATGACGAGG TATTCTTCTG ATTGAGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005618--C:cell wall
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_483145

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	48.85	1.00e-57	215.00
IUUC-Aml-002001	Ailuropoda melanoleuca	46.67	5.00e-25	107.00
IUUC-Atr-002522	Amborella trichopoda	59.64	7.00e-46	176.00
IUUC-Apl-003778	Anas platyrhynchos	42.64	9.00e-27	112.00
IUUC-Aca-004365	Anolis carolinensis	45.95	7.00e-20	88.20
IUUC-Ath-006961	Arabidopsis thaliana	94.85	2.00e-145	507.00
IUUC-Ame-010626	Astyanax mexicanus	30.43	4.00e-27	114.00
IUUC-Bta-013190	Bos taurus	31.28	1.00e-27	116.00
IUUC-Bdi-014137	Brachypodium distachyon	49.48	9.00e-67	246.00
IUUC-Bol-015845	Brassica oleracea	71.69	6.00e-121	426.00
IUUC-Bra-017780	Brassica rapa	81.87	3.00e-123	433.00
IUUC-Cja-019575	Callithrix jacchus	47.62	5.00e-26	110.00
IUUC-Cfa-020142	Canis familiaris	46.67	4.00e-25	107.00
IUUC-Cpo-022451	Cavia porcellus	48.57	3.00e-26	111.00
IUUC-Csa-023433	Chlorocebus sabaeus	47.62	3.00e-26	111.00
IUUC-Cho-024643	Choloepus hoffmanni	42.86	9.00e-24	103.00
IUUC-Cne-026837	Cryptococcus neoformans	38.41	3.00e-20	92.40
IUUC-Dre-027400	Danio rerio	29.48	7.00e-27	113.00
IUUC-Dno-029349	Dasypus novemcinctus	47.62	6.00e-26	110.00
IUUC-Dor-030103	Dipodomys ordii	47.62	5.00e-26	110.00
IUUC-Ete-032392	Echinops telfairi	40.95	7.00e-22	97.10
IUUC-Eca-034240	Equus caballus	46.67	2.00e-25	108.00
IUUC-Fca-036192	Felis catus	29.03	1.00e-25	109.00
IUUC-Fal-037027	Ficedula albicollis	38.41	5.00e-27	114.00
IUUC-Gmo-038515	Gadus morhua	30.19	2.00e-28	118.00
IUUC-Gga-040682	Gallus gallus	41.86	3.00e-26	111.00
IUUC-Gac-041369	Gasterosteus aculeatus	38.41	2.00e-27	115.00
IUUC-Gma-043643	Glycine max	57.75	2.00e-91	328.00
IUUC-Ggo-044873	Gorilla gorilla	41.32	8.00e-25	106.00
IUUC-Hsa-046723	Homo sapiens	47.62	8.00e-26	110.00
IUUC-Hvu-047602	Hordeum vulgare	49.79	4.00e-62	230.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	47.62	4.00e-26	110.00
IUUC-Lch-050673	Latimeria chalumnae	31.58	4.00e-28	117.00
IUUC-Lpe-051427	Leersia perrieri	50.95	9.00e-59	219.00
IUUC-Loc-052470	Lepisosteus oculatus	50.00	1.00e-23	102.00
IUUC-Laf-054384	Loxodonta africana	28.73	9.00e-24	103.00
IUUC-Mcc-055739	Macaca mulatta	47.62	8.00e-26	110.00
IUUC-Meu-056635	Macropus eugenii	30.25	5.00e-25	107.00
IUUC-Mtr-057711	Medicago truncatula	47.52	6.00e-63	233.00
IUUC-Mga-059349	Meleagris gallopavo	41.86	4.00e-26	111.00
IUUC-Mmr-060653	Microcebus murinus	47.62	6.00e-26	110.00
IUUC-Mdo-062442	Monodelphis domestica	42.64	1.00e-26	112.00
IUUC-Mmu-064196	Mus musculus	29.64	2.00e-26	112.00
IUUC-Mac-064627	Musa acuminata	41.64	5.00e-58	216.00
IUUC-Mpu-065917	Mustela putorius furo	46.67	4.00e-25	107.00
IUUC-Mlu-067495	Myotis lucifugus	48.57	8.00e-27	113.00
IUUC-Nle-069274	Nomascus leucogenys	47.62	1.00e-25	109.00
IUUC-Opr-070812	Ochotona princeps	28.94	9.00e-26	109.00
IUUC-Ont-071505	Oreochromis niloticus	29.59	2.00e-27	115.00
IUUC-Oan-073225	Ornithorhynchus anatinus	45.71	3.00e-25	108.00
IUUC-Ocu-074691	Oryctolagus cuniculus	29.32	5.00e-25	107.00
IUUC-Oba-075047	Oryza barthii	50.70	3.00e-66	244.00
IUUC-Obr-076829	Oryza brachyantha	48.45	3.00e-64	237.00
IUUC-Ogl-077378	Oryza glaberrima	50.35	1.00e-65	242.00
IUUC-Ogu-078709	Oryza glumaepatula	50.35	4.00e-66	243.00
IUUC-Oin-079400	Oryza indica	40.41	3.00e-38	151.00
IUUC-Olo-080762	Oryza longistaminata	50.70	3.00e-66	244.00
IUUC-Ome-081717	Oryza meridionalis	37.46	2.00e-56	212.00
IUUC-Oni-083090	Oryza nivara	50.35	4.00e-66	243.00
IUUC-Opu-083898	Oryza punctata	50.70	3.00e-66	244.00
IUUC-Oru-084267	Oryza rufipogon	50.70	2.00e-66	244.00
IUUC-Osa-086229	Oryza sativa	50.35	4.00e-66	243.00
IUUC-Ola-087338	Oryzias latipes	43.41	4.00e-27	114.00
IUUC-Oga-088067	Otolemur garnettii	42.64	5.00e-26	110.00
IUUC-Oar-089999	Ovis aries	31.40	3.00e-27	115.00
IUUC-Ptr-091473	Pan troglodytes	39.52	1.00e-24	106.00
IUUC-Pan-092424	Papio anubis	47.62	1.00e-25	109.00
IUUC-Psi-093171	Pelodiscus sinensis	40.56	3.00e-26	111.00
IUUC-Pfo-097402	Poecilia formosa	31.34	2.00e-28	119.00
IUUC-Pab-098466	Pongo abelii	39.52	1.00e-24	105.00
IUUC-Pop-099462	Populus trichocarpa	57.75	4.00e-88	317.00
IUUC-Pca-100442	Procavia capensis	48.57	4.00e-26	110.00
IUUC-Ppe-101324	Prunus persica	54.12	6.00e-82	296.00
IUUC-Pva-102881	Pteropus vampyrus	29.62	5.00e-27	114.00
IUUC-Rno-105203	Rattus norvegicus	46.67	2.00e-25	108.00
IUUC-Sha-107638	Sarcophilus harrisii	43.41	3.00e-27	114.00
IUUC-Sit-110648	Setaria italica	50.17	9.00e-66	242.00
IUUC-Sly-111407	Solanum lycopersicum	49.20	2.00e-68	252.00
IUUC-Stu-112467	Solanum tuberosum	50.80	3.00e-69	254.00
IUUC-Sbi-114297	Sorghum bicolor	49.65	3.00e-65	241.00
IUUC-Ssc-115917	Sus scrofa	31.40	6.00e-29	120.00
IUUC-Tgu-117502	Taeniopygia guttata	42.64	3.00e-26	111.00
IUUC-Tru-117681	Takifugu rubripes	30.51	1.00e-27	116.00
IUUC-Tsy-119630	Tarsius syrichta	42.86	1.00e-22	99.40
IUUC-Tni-120092	Tetraodon nigroviridis	30.38	4.00e-27	114.00
IUUC-Tca-121480	Theobroma cacao	60.54	3.00e-95	340.00
IUUC-Tae-124133	Triticum aestivum	47.72	2.00e-63	234.00
IUUC-Tur-125986	Triticum urartu	43.60	4.00e-52	199.00
IUUC-Tbe-127794	Tupaia belangeri	45.31	2.00e-15	75.50
IUUC-Ttr-128843	Tursiops truncatus	48.57	1.00e-25	109.00
IUUC-Uma-129414	Ustilago maydis	37.61	3.00e-16	79.70
IUUC-Vpa-130755	Vicugna pacos	43.81	4.00e-24	104.00
IUUC-Vvi-131335	Vitis vinifera	55.42	5.00e-84	303.00
IUUC-Xtr-132815	Xenopus tropicalis	30.92	3.00e-29	121.00
IUUC-Xma-133481	Xiphophorus maculatus	31.11	8.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence