iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007616

UUCD1 version

UUC-ArT-00704

Ensembl Protein ID

AT3G56580.3

UniProt Accession

Q94AK4; Q94AK4_ARATH

Genbank Protein ID

AAK76657.1; AAM20263.1; AAY57600.1; AEE79537.1; AEE79538.1; AEE79539.1

Protein Name

Putative uncharacterized protein At3g56580; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AY045983; AY096613; DQ059114; CP002686; CP002686; CP002686

Gene Name

AtRZF1; RING Zinc Finger 1; RZF1; At3g56575; At3g56580; T5P19.5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G56580	AT3G56580.3	AT3G56580.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	23415322; 24525351

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	3.50e-06	28.3	186	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+++f  k + + +pC H++h dC+  w        ++ +CP+Cr
   Q: 186  CPVCKDEFelKSEAKQMPCHHIYHSDCIVPW------LVQHNSCPVCR 227
           ********88555899***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSIRNTHWC HRCQRAVWLR ARDAVCSYCG GGFVEEIDIG PSRAHRDVER DPTFDLMEAF 60
SAFMRSRLAE RSYDREISGR LGSAGSESFS NLAPLLIFGG QAPFRLAGGD NSSVEAFVNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGTTGCT CTCTTTTGGT TCGTTTTCTT CCTCCAAAAT CCAATCTTAC CACAGTTTCT 60
TTAGGGTTTC TTCTTCGTCT TCCTTTGGAT CTATGTGAAC AGGTATGTAA CTGATTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:1902006--P:negative regulation of proline biosynthetic process
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009414--P:response to water deprivation

KEGG

ath:AT3G56580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002001	Ailuropoda melanoleuca	30.08	6.00e-27	114.00
IUUC-Apl-003778	Anas platyrhynchos	44.09	8.00e-27	113.00
IUUC-Aca-004365	Anolis carolinensis	48.65	2.00e-20	89.70
IUUC-Bta-012808	Bos taurus	44.09	7.00e-26	110.00
IUUC-Bol-016085	Brassica oleracea	72.70	6.00e-114	403.00
IUUC-Bra-016939	Brassica rapa	73.07	1.00e-114	405.00
IUUC-Cja-019575	Callithrix jacchus	50.50	4.00e-26	111.00
IUUC-Cfa-020142	Canis familiaris	44.09	5.00e-26	110.00
IUUC-Cpo-022451	Cavia porcellus	30.00	3.00e-27	114.00
IUUC-Csa-023433	Chlorocebus sabaeus	31.09	3.00e-28	118.00
IUUC-Cho-024643	Choloepus hoffmanni	43.44	2.00e-25	108.00
IUUC-Dor-030103	Dipodomys ordii	44.09	2.00e-26	112.00
IUUC-Ete-032392	Echinops telfairi	43.56	1.00e-22	99.80
IUUC-Eca-034240	Equus caballus	43.31	8.00e-26	109.00
IUUC-Fal-037027	Ficedula albicollis	44.09	7.00e-27	113.00
IUUC-Gmo-039694	Gadus morhua	30.66	7.00e-27	113.00
IUUC-Gga-040682	Gallus gallus	43.31	3.00e-26	111.00
IUUC-Gac-041364	Gasterosteus aculeatus	30.94	1.00e-28	119.00
IUUC-Ggo-044873	Gorilla gorilla	43.44	2.00e-25	108.00
IUUC-Hsa-046723	Homo sapiens	31.32	1.00e-27	116.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	44.09	2.00e-26	112.00
IUUC-Lch-050071	Latimeria chalumnae	43.31	3.00e-26	111.00
IUUC-Mcc-055739	Macaca mulatta	31.32	9.00e-28	116.00
IUUC-Meu-056635	Macropus eugenii	43.44	1.00e-25	109.00
IUUC-Mla-058832	Melampsora laricipopulina	45.83	4.00e-17	80.10
IUUC-Mga-059349	Meleagris gallopavo	43.31	2.00e-26	112.00
IUUC-Mmr-060653	Microcebus murinus	31.84	4.00e-28	117.00
IUUC-Mdo-062442	Monodelphis domestica	30.71	7.00e-27	113.00
IUUC-Mmu-064148	Mus musculus	30.63	6.00e-28	117.00
IUUC-Mpu-065917	Mustela putorius furo	44.09	5.00e-26	110.00
IUUC-Mlu-067495	Myotis lucifugus	31.84	1.00e-28	119.00
IUUC-Nle-069274	Nomascus leucogenys	50.50	1.00e-25	109.00
IUUC-Opr-070812	Ochotona princeps	47.52	4.00e-25	107.00
IUUC-Oan-073225	Ornithorhynchus anatinus	43.31	1.00e-26	112.00
IUUC-Ola-087338	Oryzias latipes	44.88	2.00e-27	115.00
IUUC-Oga-088067	Otolemur garnettii	50.50	4.00e-26	110.00
IUUC-Oar-089999	Ovis aries	30.08	1.00e-26	113.00
IUUC-Ptr-091473	Pan troglodytes	43.44	2.00e-25	108.00
IUUC-Pan-092424	Papio anubis	31.32	9.00e-28	116.00
IUUC-Pab-098466	Pongo abelii	43.44	2.00e-25	108.00
IUUC-Pca-100442	Procavia capensis	44.88	2.00e-26	111.00
IUUC-Pva-103240	Pteropus vampyrus	31.58	2.00e-28	119.00
IUUC-Rno-105203	Rattus norvegicus	30.63	1.00e-27	116.00
IUUC-Sha-107638	Sarcophilus harrisii	44.88	2.00e-27	115.00
IUUC-Tgu-117502	Taeniopygia guttata	44.09	3.00e-26	111.00
IUUC-Tsy-119630	Tarsius syrichta	43.44	5.00e-24	103.00
IUUC-Tni-120720	Tetraodon nigroviridis	32.45	1.00e-28	119.00
IUUC-Ttr-128843	Tursiops truncatus	30.08	4.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence