iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099462

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_734690; POPTR_0016s02910g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s02910	POPTR_0016s02910.1	POPTR_0016s02910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-06	29.0	186	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C++ f   ++  + +pC H++h dC+  w        ++ +CP+Cr
   Q: 186  CPVCKDKFelgSE-ARQMPCDHLYHSDCIVPW------LVQHNSCPVCR 227
           ********77544.999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSSRNTHWC YSCRRPVRLR GRDSACPYCS GGFVQELDDM HRISPLDFFG MDSDDDRDQR 60
FGLMEAFSDF MRQRMADRSH NHDIRSRSDS VPGHNPGFGP LLIFGGQVPF RLSGNGGFEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGACCATTT TTCACCCGCT GCACACTCCA CTGTAGTCAA GTCTCTTCTC TCTAGCACAC 60
ACACAGAATC TACTGTCAGA TCCAGACAAC CCCTTTTAAT CTTTCCTGTT AAGGTAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0016s02910g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000551	Aegilops tauschii	55.86	4.00e-68	250.00
IUUC-Aml-002001	Ailuropoda melanoleuca	50.51	3.00e-25	108.00
IUUC-Apl-003778	Anas platyrhynchos	50.51	3.00e-26	111.00
IUUC-Aly-006495	Arabidopsis lyrata	65.97	1.00e-81	295.00
IUUC-Ath-006961	Arabidopsis thaliana	66.10	6.00e-83	300.00
IUUC-Ame-010626	Astyanax mexicanus	48.48	2.00e-25	108.00
IUUC-Bta-012808	Bos taurus	50.51	3.00e-25	108.00
IUUC-Bdi-014137	Brachypodium distachyon	55.36	5.00e-82	296.00
IUUC-Bra-017780	Brassica rapa	54.57	3.00e-74	271.00
IUUC-Cja-019575	Callithrix jacchus	50.51	1.00e-25	110.00
IUUC-Cfa-020142	Canis familiaris	50.51	3.00e-25	108.00
IUUC-Cpo-022451	Cavia porcellus	51.52	8.00e-26	110.00
IUUC-Csa-023433	Chlorocebus sabaeus	29.67	5.00e-27	114.00
IUUC-Cho-024643	Choloepus hoffmanni	45.45	2.00e-23	102.00
IUUC-Dre-027515	Danio rerio	44.83	2.00e-25	109.00
IUUC-Dno-029349	Dasypus novemcinctus	50.51	9.00e-26	109.00
IUUC-Dor-030103	Dipodomys ordii	50.51	1.00e-25	109.00
IUUC-Fal-037027	Ficedula albicollis	50.51	4.00e-26	110.00
IUUC-Gmo-038515	Gadus morhua	30.22	1.00e-25	109.00
IUUC-Gga-040682	Gallus gallus	49.49	1.00e-25	109.00
IUUC-Gac-041369	Gasterosteus aculeatus	48.48	8.00e-26	110.00
IUUC-Gma-043643	Glycine max	70.97	3.00e-119	420.00
IUUC-Ggo-044873	Gorilla gorilla	45.45	9.00e-24	103.00
IUUC-Hsa-046723	Homo sapiens	29.56	4.00e-26	111.00
IUUC-Hvu-047602	Hordeum vulgare	55.93	4.00e-72	264.00
IUUC-Itr-048435	Ictidomys tridecemlineatus	50.51	6.00e-26	110.00
IUUC-Lch-050071	Latimeria chalumnae	48.48	8.00e-25	107.00
IUUC-Lpe-051427	Leersia perrieri	58.33	2.00e-70	258.00
IUUC-Loc-052470	Lepisosteus oculatus	51.14	8.00e-27	113.00
IUUC-Mcc-055739	Macaca mulatta	29.56	3.00e-26	112.00
IUUC-Mga-059349	Meleagris gallopavo	49.49	1.00e-25	110.00
IUUC-Mmr-060653	Microcebus murinus	50.51	1.00e-25	109.00
IUUC-Mdo-062442	Monodelphis domestica	50.51	5.00e-26	110.00
IUUC-Mmu-064148	Mus musculus	49.49	3.00e-25	108.00
IUUC-Mac-064627	Musa acuminata	47.27	3.00e-69	254.00
IUUC-Mpu-065917	Mustela putorius furo	50.51	3.00e-25	108.00
IUUC-Mlu-067495	Myotis lucifugus	51.52	1.00e-26	112.00
IUUC-Nle-069274	Nomascus leucogenys	50.51	2.00e-25	108.00
IUUC-Ont-071505	Oreochromis niloticus	48.48	6.00e-26	110.00
IUUC-Oan-073225	Ornithorhynchus anatinus	29.41	2.00e-25	108.00
IUUC-Oba-075047	Oryza barthii	58.48	4.00e-80	290.00
IUUC-Obr-076829	Oryza brachyantha	56.03	4.00e-81	293.00
IUUC-Ogl-077378	Oryza glaberrima	58.12	2.00e-79	288.00
IUUC-Ogu-078709	Oryza glumaepatula	58.48	5.00e-80	290.00
IUUC-Olo-080762	Oryza longistaminata	58.48	4.00e-80	290.00
IUUC-Ome-081453	Oryza meridionalis	41.90	5.00e-65	240.00
IUUC-Oni-083090	Oryza nivara	58.48	5.00e-80	290.00
IUUC-Opu-083898	Oryza punctata	58.12	3.00e-79	287.00
IUUC-Oru-084267	Oryza rufipogon	58.48	5.00e-80	290.00
IUUC-Osa-086229	Oryza sativa	58.48	5.00e-80	290.00
IUUC-Ola-087338	Oryzias latipes	49.49	2.00e-25	108.00
IUUC-Oga-088067	Otolemur garnettii	50.51	1.00e-25	109.00
IUUC-Oar-089999	Ovis aries	30.31	2.00e-26	112.00
IUUC-Ptr-091473	Pan troglodytes	45.45	9.00e-24	103.00
IUUC-Pan-092424	Papio anubis	29.56	2.00e-26	112.00
IUUC-Psi-093171	Pelodiscus sinensis	49.49	7.00e-26	110.00
IUUC-Pfo-097402	Poecilia formosa	31.06	3.00e-25	108.00
IUUC-Pab-098466	Pongo abelii	28.63	8.00e-24	103.00
IUUC-Pca-100442	Procavia capensis	51.52	6.00e-26	110.00
IUUC-Pva-103240	Pteropus vampyrus	29.81	1.00e-26	113.00
IUUC-Sha-107638	Sarcophilus harrisii	50.00	3.00e-26	111.00
IUUC-Sit-110648	Setaria italica	56.14	1.00e-79	288.00
IUUC-Sly-111407	Solanum lycopersicum	52.50	2.00e-78	284.00
IUUC-Sbi-114297	Sorghum bicolor	56.49	1.00e-79	288.00
IUUC-Ssc-115917	Sus scrofa	30.23	2.00e-26	112.00
IUUC-Tgu-117502	Taeniopygia guttata	50.51	1.00e-25	109.00
IUUC-Tru-117681	Takifugu rubripes	46.08	3.00e-24	104.00
IUUC-Tni-120092	Tetraodon nigroviridis	46.46	1.00e-24	106.00
IUUC-Tca-121480	Theobroma cacao	73.57	9.00e-124	435.00
IUUC-Tae-124133	Triticum aestivum	55.52	1.00e-76	278.00
IUUC-Tur-125986	Triticum urartu	47.90	6.00e-62	231.00
IUUC-Ttr-128843	Tursiops truncatus	51.52	2.00e-25	109.00
IUUC-Vvi-131335	Vitis vinifera	70.48	2.00e-116	410.00
IUUC-Xtr-132815	Xenopus tropicalis	29.28	2.00e-28	119.00
IUUC-Xma-133481	Xiphophorus maculatus	48.48	5.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence