iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132395

UUCD1 version

UUC-XeT-00920

Ensembl Protein ID

ENSXETP00000011458.3

UniProt Accession

Q5EBE8; A1L0Z7; EIF3I_XENTR

Genbank Protein ID

CAL49363.1; AAH89722.1; AAI27353.1; AAI57540.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 subunit 2; eIF-3-beta; eIF3 p36

Genbank Nucleotide ID

CR855704; BC089722; BC127352; BC157539

Gene Name

eif3i; eif3s2; TGas097i03.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000005247.3	ENSXETT00000011458.3	ENSXETP00000011458.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-21	75.3	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..afsd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ v+c+  ++ d ++++sGs D+++++WD  tg++l
   Q: 50   GHTGAVWCVdvDW-DtRHVLSGSADNSCRLWDCETGKQL 87
           8*******63377.559******************9986 PP

Organism

Xenopus tropicalis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLQGHE RSITQIKYNR DGDLLFTVAK DPVVNVWYSV NGERLGTYSG HTGAVWCVDV 60
DWDTRHVLSG SADNSCRLWD CETGKQLALL ETNSAVRTCG FDFGGNIIMF STDKQMGYQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGCGCCTG ATCCGGGCCG AGCGGGTTGT AAAATGGTGA GTAATATGGT GTCTCGAATG 60
CCGAACCTGG AATGATCCTG GCTTCTGGAT CTGGTTCGCT CACTCCATAA AGAAGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001889--P:liver development
GO:0002040--P:sprouting angiogenesis
GO:0006413--P:translational initiation

KEGG

xtr:548498

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	58.41	2.00e-34	139.00
IUUC-Aml-001321	Ailuropoda melanoleuca	90.12	0.00e+00	629.00
IUUC-Atr-002468	Amborella trichopoda	51.05	9.00e-54	202.00
IUUC-Apl-003841	Anas platyrhynchos	89.81	0.00e+00	627.00
IUUC-Aca-005123	Anolis carolinensis	88.92	3.00e-180	623.00
IUUC-Aly-005473	Arabidopsis lyrata	45.73	4.00e-86	311.00
IUUC-Ath-007094	Arabidopsis thaliana	46.04	6.00e-87	313.00
IUUC-Ago-008000	Ashbya gossypii	45.45	9.00e-82	296.00
IUUC-Acl-008098	Aspergillus clavatus	53.01	4.00e-102	364.00
IUUC-Afl-008494	Aspergillus flavus	52.60	6.00e-102	363.00
IUUC-Afu-009080	Aspergillus fumigatus	52.71	9.00e-103	366.00
IUUC-Ani-009230	Aspergillus nidulans	54.71	4.00e-103	367.00
IUUC-Aor-010114	Aspergillus oryzae	52.60	6.00e-102	363.00
IUUC-Ate-010285	Aspergillus terreus	54.57	1.00e-104	372.00
IUUC-Ame-011534	Astyanax mexicanus	83.18	4.00e-172	596.00
IUUC-Bgr-012121	Blumeria graminis	51.83	3.00e-93	334.00
IUUC-Bta-013143	Bos taurus	89.85	0.00e+00	630.00
IUUC-Bci-013950	Botrytis cinerea	52.91	1.00e-100	358.00
IUUC-Bdi-015019	Brachypodium distachyon	48.77	3.00e-90	325.00
IUUC-Bol-015709	Brassica oleracea	45.76	2.00e-83	303.00
IUUC-Bra-017760	Brassica rapa	46.06	7.00e-84	304.00
IUUC-Cel-018226	Caenorhabditis elegans	41.72	2.00e-79	288.00
IUUC-Cja-019741	Callithrix jacchus	90.15	0.00e+00	633.00
IUUC-Cfa-021204	Canis familiaris	89.81	0.00e+00	629.00
IUUC-Cpo-021661	Cavia porcellus	90.43	0.00e+00	630.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	42.41	4.00e-81	294.00
IUUC-Csa-024038	Chlorocebus sabaeus	90.15	0.00e+00	633.00
IUUC-Cin-025597	Ciona intestinalis	60.00	2.00e-119	421.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	52.91	3.00e-97	348.00
IUUC-Cne-026838	Cryptococcus neoformans	49.24	7.00e-93	333.00
IUUC-Cme-027304	Cyanidioschyzon merolae	44.86	9.00e-80	290.00
IUUC-Dre-028567	Danio rerio	84.00	2.00e-174	604.00
IUUC-Dno-029171	Dasypus novemcinctus	89.81	0.00e+00	629.00
IUUC-Dor-030257	Dipodomys ordii	78.98	2.00e-80	292.00
IUUC-Dse-031191	Dothistroma septosporum	50.15	1.00e-92	332.00
IUUC-Dme-031879	Drosophila melanogaster	61.96	4.00e-123	433.00
IUUC-Ete-032336	Echinops telfairi	89.25	2.00e-115	407.00
IUUC-Eca-033259	Equus caballus	90.12	0.00e+00	630.00
IUUC-Eeu-035153	Erinaceus europaeus	68.46	8.00e-54	203.00
IUUC-Fca-036489	Felis catus	90.12	0.00e+00	630.00
IUUC-Fal-037485	Ficedula albicollis	90.43	0.00e+00	630.00
IUUC-Fox-037860	Fusarium oxysporum	51.07	1.00e-96	345.00
IUUC-Fso-038188	Fusarium solani	51.38	6.00e-95	340.00
IUUC-Gmo-039311	Gadus morhua	83.33	5.00e-171	592.00
IUUC-Ggr-040045	Gaeumannomyces graminis	53.52	4.00e-101	360.00
IUUC-Gga-040645	Gallus gallus	87.69	3.00e-180	624.00
IUUC-Gac-042086	Gasterosteus aculeatus	84.31	4.00e-170	590.00
IUUC-Gma-043246	Glycine max	47.24	2.00e-88	318.00
IUUC-Ggo-045578	Gorilla gorilla	90.15	0.00e+00	633.00
IUUC-Hsa-046734	Homo sapiens	90.15	0.00e+00	633.00
IUUC-Hvu-047553	Hordeum vulgare	47.85	8.00e-89	320.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	89.81	0.00e+00	629.00
IUUC-Kpa-049325	Komagataella pastoris	44.79	9.00e-85	306.00
IUUC-Lch-049620	Latimeria chalumnae	86.24	1.00e-160	558.00
IUUC-Lpe-051338	Leersia perrieri	46.30	2.00e-81	295.00
IUUC-Loc-052094	Lepisosteus oculatus	78.33	1.00e-156	545.00
IUUC-Lma-053047	Leptosphaeria maculans	50.30	4.00e-95	341.00
IUUC-Laf-053801	Loxodonta africana	90.25	8.00e-179	619.00
IUUC-Mcc-055498	Macaca mulatta	80.62	2.00e-152	530.00
IUUC-Meu-056729	Macropus eugenii	84.05	2.00e-166	577.00
IUUC-Mor-057025	Magnaporthe oryzae	52.29	9.00e-97	346.00
IUUC-Mpo-057511	Magnaporthe poae	53.52	3.00e-100	358.00
IUUC-Mtr-058051	Medicago truncatula	48.32	7.00e-89	320.00
IUUC-Mla-059061	Melampsora laricipopulina	47.35	1.00e-83	302.00
IUUC-Mga-059229	Meleagris gallopavo	88.96	5.00e-179	619.00
IUUC-Mvi-060399	Microbotryum violaceum	47.45	1.00e-82	299.00
IUUC-Mmr-060764	Microcebus murinus	90.46	0.00e+00	634.00
IUUC-Mdo-062088	Monodelphis domestica	90.46	0.00e+00	632.00
IUUC-Mmu-064304	Mus musculus	89.85	0.00e+00	632.00
IUUC-Mac-065520	Musa acuminata	48.45	1.00e-88	319.00
IUUC-Mpu-066340	Mustela putorius furo	90.12	0.00e+00	630.00
IUUC-Mlu-067111	Myotis lucifugus	90.12	0.00e+00	630.00
IUUC-Nfi-068478	Neosartorya fischeri	52.71	1.00e-102	365.00
IUUC-Ncr-068820	Neurospora crassa	52.91	2.00e-97	348.00
IUUC-Nle-069903	Nomascus leucogenys	90.12	0.00e+00	631.00
IUUC-Opr-070221	Ochotona princeps	87.69	7.00e-177	612.00
IUUC-Ont-071765	Oreochromis niloticus	84.92	3.00e-173	600.00
IUUC-Oan-073660	Ornithorhynchus anatinus	89.12	7.00e-163	565.00
IUUC-Ocu-074039	Oryctolagus cuniculus	90.12	0.00e+00	630.00
IUUC-Oba-075395	Oryza barthii	40.80	1.00e-70	259.00
IUUC-Obr-076334	Oryza brachyantha	44.48	2.00e-80	292.00
IUUC-Ogl-077060	Oryza glaberrima	47.40	2.00e-86	311.00
IUUC-Ogu-078207	Oryza glumaepatula	47.08	2.00e-88	318.00
IUUC-Oin-079878	Oryza indica	48.16	2.00e-89	322.00
IUUC-Olo-080677	Oryza longistaminata	40.26	2.00e-78	285.00
IUUC-Ome-081228	Oryza meridionalis	35.80	3.00e-37	148.00
IUUC-Oni-082411	Oryza nivara	41.52	4.00e-71	261.00
IUUC-Opu-083136	Oryza punctata	46.63	6.00e-87	313.00
IUUC-Oru-084916	Oryza rufipogon	46.57	2.00e-86	311.00
IUUC-Osa-085454	Oryza sativa	48.16	2.00e-89	322.00
IUUC-Ola-087053	Oryzias latipes	83.69	3.00e-171	593.00
IUUC-Olu-087602	Ostreococcus lucimarinus	47.52	1.00e-89	322.00
IUUC-Oga-088154	Otolemur garnettii	89.81	0.00e+00	627.00
IUUC-Oar-089915	Ovis aries	89.81	0.00e+00	628.00
IUUC-Ptr-091124	Pan troglodytes	72.19	2.00e-136	478.00
IUUC-Pan-092035	Papio anubis	90.15	0.00e+00	633.00
IUUC-Psi-094096	Pelodiscus sinensis	86.18	9.00e-115	405.00
IUUC-Pno-094988	Phaeosphaeria nodorum	47.27	1.00e-83	302.00
IUUC-Ppa-095536	Physcomitrella patens	50.62	3.00e-93	334.00
IUUC-Pfo-096101	Poecilia formosa	84.62	2.00e-172	597.00
IUUC-Pab-097726	Pongo abelii	90.15	0.00e+00	633.00
IUUC-Pop-099617	Populus trichocarpa	47.55	3.00e-89	321.00
IUUC-Pca-101014	Procavia capensis	90.15	0.00e+00	632.00
IUUC-Ppe-101320	Prunus persica	46.32	2.00e-86	312.00
IUUC-Pva-102789	Pteropus vampyrus	78.46	2.00e-153	534.00
IUUC-Pgr-103479	Puccinia graminis	48.29	2.00e-84	305.00
IUUC-Ptt-103981	Puccinia triticina	48.60	3.00e-86	311.00
IUUC-Pte-104278	Pyrenophora teres	50.91	6.00e-94	337.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	50.91	6.00e-94	337.00
IUUC-Rno-105867	Rattus norvegicus	69.94	1.00e-130	458.00
IUUC-Sce-106251	Saccharomyces cerevisiae	46.08	3.00e-84	305.00
IUUC-Sha-107039	Sarcophilus harrisii	90.46	0.00e+00	634.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	53.05	4.00e-99	354.00
IUUC-Spo-108314	Schizosaccharomyces pombe	51.83	8.00e-96	343.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	52.29	7.00e-100	356.00
IUUC-Smo-108728	Selaginella moellendorffii	48.77	3.00e-87	314.00
IUUC-Sit-110801	Setaria italica	47.24	2.00e-87	315.00
IUUC-Sly-111326	Solanum lycopersicum	48.32	8.00e-89	320.00
IUUC-Stu-112458	Solanum tuberosum	48.16	2.00e-88	318.00
IUUC-Sbi-114063	Sorghum bicolor	46.93	2.00e-86	312.00
IUUC-Sre-115096	Sporisorium reilianum	50.15	6.00e-86	310.00
IUUC-Ssc-116080	Sus scrofa	90.15	0.00e+00	631.00
IUUC-Tgu-116988	Taeniopygia guttata	90.12	0.00e+00	629.00
IUUC-Tru-118766	Takifugu rubripes	84.92	2.00e-173	601.00
IUUC-Tni-120197	Tetraodon nigroviridis	84.31	5.00e-173	599.00
IUUC-Tca-121316	Theobroma cacao	47.40	6.00e-88	317.00
IUUC-Tre-122097	Trichoderma reesei	52.91	3.00e-98	351.00
IUUC-Tvi-122442	Trichoderma virens	52.91	1.00e-98	352.00
IUUC-Tae-125800	Triticum aestivum	47.85	8.00e-89	320.00
IUUC-Tur-126334	Triticum urartu	41.72	9.00e-70	256.00
IUUC-Tme-127038	Tuber melanosporum	54.43	3.00e-103	367.00
IUUC-Ttr-128659	Tursiops truncatus	85.23	2.00e-159	554.00
IUUC-Uma-129464	Ustilago maydis	50.15	2.00e-85	308.00
IUUC-Vda-129841	Verticillium dahliae	53.52	8.00e-99	353.00
IUUC-Vvi-131076	Vitis vinifera	48.62	5.00e-89	320.00
IUUC-Xma-133383	Xiphophorus maculatus	84.31	1.00e-171	595.00
IUUC-Yli-134586	Yarrowia lipolytica	49.54	4.00e-82	297.00
IUUC-Zma-135904	Zea mays	47.24	4.00e-87	314.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence