iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050313

Ensembl Protein ID

ENSLACP00000014075.1

UniProt Accession

H3AWQ4; H3AWQ4_LATCH

Genbank Protein ID

ENSLACP00000014075

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01087462

Gene Name

WDR47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000012389.1	ENSLACT00000014174.1	ENSLACP00000014075.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-29	101.2	759	795
UBD/Beta-Prp	1.60e-42	146.0	663	922

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  +s+++++sGs D+t++ WDlr   ++
   Q: 759  GHTGHILALYtWSGWMIASGSQDKTVRFWDLRVPSCV 795
           89999***966977*****************988887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  +  +++       ++s h+++++++ f +  +    il++++  D +i+  d + g
   Q: 663  NKHHKGSIYCVAWSPCGQLLATGSNDKFVKVLPFNAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQRG 751
           68*****************************99999999889888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +l+l     g  ++sGs+d+t+r wdl+  +c++     + g  ++v +v+v+p+g+ll++G  D+ ++l+d++ g+
   Q: 752  QGLHALSGHTGHILALYTWS-GWMIASGSQDKTVRFWDLRVPSCVRVvgtSFHGSGSAVASVAVDPSGRLLATGQEDNSCMLYDIRGGR 839
           **************997777.9***********************9999999************************************* PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           +++t    ht++v+s+ f++   +l++gs+d+++k+ dlq    +   +  + +h+d v + r + +d  ++s s+D+++ +W 
   Q: 840  MVQTYHP-HTSDVRSVRFSPGAHYLLTGSYDTKIKVTDLQgdltKPLPMTVVAEHKDKVIQCRWHTQDLSFLSSSADRTVTLWT 922
           *****98.********************************99966666777888*****************************4 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MTAEETINVK EAEIIKLILD FLNSRKLHIS MLALEKESGV INGLYSDDML FLRQLVLDGQ 60
WDEVLQFIQP LECMDKFDKK RFRYIILKQK FLEALCVNNA MSAEDEPQQL EYTMQEAVNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCTGGGA GCCGGTGAGG GTGGACAGAC GACGACGACA ACAACAACAA CAAGACGGAG 60
ATTGAGAGAG GCGAGCAACC AGTTCTCACC ACGCCACACG GATCCGGGGG GGGGTAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	80.28	0.00e+00	1374.00
IUUC-Apl-003954	Anas platyrhynchos	81.43	0.00e+00	1413.00
IUUC-Aca-004766	Anolis carolinensis	79.76	0.00e+00	1363.00
IUUC-Ame-010725	Astyanax mexicanus	69.37	4.00e-176	611.00
IUUC-Bta-013072	Bos taurus	79.89	0.00e+00	1365.00
IUUC-Cel-018667	Caenorhabditis elegans	49.54	3.00e-96	346.00
IUUC-Cja-018835	Callithrix jacchus	80.28	0.00e+00	1378.00
IUUC-Cfa-020380	Canis familiaris	72.65	0.00e+00	775.00
IUUC-Cpo-021883	Cavia porcellus	80.41	0.00e+00	1362.00
IUUC-Csa-023467	Chlorocebus sabaeus	80.89	0.00e+00	1379.00
IUUC-Cho-024342	Choloepus hoffmanni	73.46	0.00e+00	1219.00
IUUC-Cin-025112	Ciona intestinalis	44.51	1.00e-74	272.00
IUUC-Dre-027530	Danio rerio	71.86	0.00e+00	1201.00
IUUC-Dno-029290	Dasypus novemcinctus	80.32	0.00e+00	1367.00
IUUC-Dor-030258	Dipodomys ordii	88.81	0.00e+00	674.00
IUUC-Dme-032040	Drosophila melanogaster	53.33	6.00e-104	370.00
IUUC-Ete-032248	Echinops telfairi	67.28	2.00e-167	582.00
IUUC-Eca-033623	Equus caballus	80.67	0.00e+00	1375.00
IUUC-Fca-036425	Felis catus	78.03	0.00e+00	1194.00
IUUC-Fal-036661	Ficedula albicollis	81.19	0.00e+00	1403.00
IUUC-Gmo-039527	Gadus morhua	70.87	5.00e-177	614.00
IUUC-Gga-041177	Gallus gallus	81.06	0.00e+00	1405.00
IUUC-Gac-042049	Gasterosteus aculeatus	70.46	0.00e+00	1195.00
IUUC-Ggo-044833	Gorilla gorilla	80.06	0.00e+00	1372.00
IUUC-Hsa-046084	Homo sapiens	80.17	0.00e+00	1375.00
IUUC-Loc-051790	Lepisosteus oculatus	77.92	0.00e+00	1367.00
IUUC-Laf-053521	Loxodonta africana	79.98	0.00e+00	1367.00
IUUC-Mcc-055053	Macaca mulatta	80.89	0.00e+00	1379.00
IUUC-Meu-056734	Macropus eugenii	86.14	0.00e+00	634.00
IUUC-Mga-059381	Meleagris gallopavo	81.30	0.00e+00	1411.00
IUUC-Mmr-060859	Microcebus murinus	80.39	0.00e+00	1372.00
IUUC-Mdo-062501	Monodelphis domestica	80.18	0.00e+00	1314.00
IUUC-Mmu-063126	Mus musculus	79.81	0.00e+00	1362.00
IUUC-Mpu-066718	Mustela putorius furo	77.75	0.00e+00	1043.00
IUUC-Mlu-067246	Myotis lucifugus	80.00	0.00e+00	1364.00
IUUC-Nle-069807	Nomascus leucogenys	80.28	0.00e+00	1375.00
IUUC-Opr-070862	Ochotona princeps	91.82	2.00e-58	220.00
IUUC-Ont-072519	Oreochromis niloticus	72.69	0.00e+00	1214.00
IUUC-Oan-072740	Ornithorhynchus anatinus	81.31	0.00e+00	725.00
IUUC-Ocu-074898	Oryctolagus cuniculus	80.84	0.00e+00	1364.00
IUUC-Ola-086396	Oryzias latipes	71.43	0.00e+00	1228.00
IUUC-Oga-088563	Otolemur garnettii	80.81	0.00e+00	1377.00
IUUC-Oar-089926	Ovis aries	80.89	0.00e+00	1375.00
IUUC-Ptr-090706	Pan troglodytes	80.06	0.00e+00	1372.00
IUUC-Pan-091740	Papio anubis	80.89	0.00e+00	1379.00
IUUC-Psi-093938	Pelodiscus sinensis	80.11	0.00e+00	1395.00
IUUC-Pfo-096531	Poecilia formosa	73.38	0.00e+00	1219.00
IUUC-Pab-098312	Pongo abelii	80.35	0.00e+00	1374.00
IUUC-Pca-101100	Procavia capensis	93.63	0.00e+00	652.00
IUUC-Pva-102734	Pteropus vampyrus	81.60	5.00e-177	614.00
IUUC-Rno-105625	Rattus norvegicus	79.72	0.00e+00	1348.00
IUUC-Sha-106999	Sarcophilus harrisii	78.29	0.00e+00	1320.00
IUUC-Sar-112988	Sorex araneus	68.07	0.00e+00	956.00
IUUC-Ssc-115384	Sus scrofa	80.45	0.00e+00	1348.00
IUUC-Tgu-116808	Taeniopygia guttata	81.10	0.00e+00	1396.00
IUUC-Tru-118233	Takifugu rubripes	71.32	0.00e+00	1179.00
IUUC-Tsy-119509	Tarsius syrichta	93.37	0.00e+00	651.00
IUUC-Tni-120473	Tetraodon nigroviridis	72.78	0.00e+00	1212.00
IUUC-Tbe-127447	Tupaia belangeri	85.49	1.00e-139	490.00
IUUC-Ttr-128459	Tursiops truncatus	79.37	0.00e+00	1285.00
IUUC-Vpa-130258	Vicugna pacos	70.26	0.00e+00	765.00
IUUC-Xtr-132609	Xenopus tropicalis	74.70	0.00e+00	1252.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence