iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074092

Ensembl Protein ID

ENSOCUP00000007739.3

UniProt Accession

G1SW88; G1SW88_RABIT

Genbank Protein ID

ENSOCUP00000007739

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02033454

Gene Name

NFX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000008957.3	ENSOCUT00000008960.3	ENSOCUP00000007739.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	87.41	0.00e+00	1922.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAEAPPVSGT FKFNTDAAEF IPQERKNSGL SCGTQRRLDS SRSGRRNYSS PPPCHLARQL 60
PYDDISAVQH SYHPLGSKPK SQQTSFQSSA SNKSSKSHGL QSQPWHKLRS EKHHIRVKKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG CGCCTCCTGT CTCAGGTACT GTCCTGGCCC ACGCGGGTCT GGGGTCCCTC 60
TCAGGGAGAG GAAATTGGGT CAGTGACGAA GTCCTAGGGC TCCAGCTAGT CATATCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR034076--R3H_NF-X1
IPR019786--Zinc_finger_PHD-type_CS
IPR000967--Znf_NFX1
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING

PROSITE

PS51061--R3H
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01424--R3H
PF01422--zf-NF-X1

SMART

SM00393--R3H
SM00184--RING
SM00438--ZnF_NFX

Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0003723--F:RNA binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001078--F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008270--F:zinc ion binding
GO:0045347--P:negative regulation of MHC class II biosynthetic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	35.49	4.00e-76	279.00
IUUC-Aml-001716	Ailuropoda melanoleuca	86.61	0.00e+00	1876.00
IUUC-Atr-002895	Amborella trichopoda	36.99	5.00e-119	422.00
IUUC-Apl-003650	Anas platyrhynchos	58.49	0.00e+00	1107.00
IUUC-Aca-004313	Anolis carolinensis	56.20	0.00e+00	1174.00
IUUC-Aly-006515	Arabidopsis lyrata	36.29	4.00e-116	412.00
IUUC-Ath-007056	Arabidopsis thaliana	35.66	3.00e-116	413.00
IUUC-Ago-007777	Ashbya gossypii	30.51	4.00e-71	263.00
IUUC-Acl-008068	Aspergillus clavatus	31.89	1.00e-63	238.00
IUUC-Afl-008499	Aspergillus flavus	31.36	1.00e-35	144.00
IUUC-Afu-009016	Aspergillus fumigatus	30.59	7.00e-77	282.00
IUUC-Ani-009477	Aspergillus nidulans	30.60	6.00e-80	292.00
IUUC-Ang-009605	Aspergillus niger	31.19	2.00e-81	297.00
IUUC-Aor-010166	Aspergillus oryzae	30.84	6.00e-41	162.00
IUUC-Ame-010640	Astyanax mexicanus	59.47	0.00e+00	911.00
IUUC-Bgr-012024	Blumeria graminis	30.54	2.00e-83	304.00
IUUC-Bta-012789	Bos taurus	85.45	0.00e+00	1874.00
IUUC-Bci-013768	Botrytis cinerea	33.42	2.00e-93	337.00
IUUC-Bdi-014723	Brachypodium distachyon	36.85	4.00e-112	399.00
IUUC-Bol-015394	Brassica oleracea	34.46	1.00e-105	377.00
IUUC-Bra-017266	Brassica rapa	34.09	2.00e-103	370.00
IUUC-Cel-018668	Caenorhabditis elegans	36.66	2.00e-131	463.00
IUUC-Cja-019769	Callithrix jacchus	84.25	0.00e+00	1811.00
IUUC-Cfa-020727	Canis familiaris	86.55	0.00e+00	1867.00
IUUC-Cpo-021741	Cavia porcellus	86.06	0.00e+00	1873.00
IUUC-Csa-024054	Chlorocebus sabaeus	86.96	0.00e+00	1877.00
IUUC-Cho-025031	Choloepus hoffmanni	80.31	0.00e+00	1239.00
IUUC-Cin-025164	Ciona intestinalis	45.91	4.00e-166	578.00
IUUC-Csv-026260	Ciona savignyi	45.14	8.00e-179	620.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	31.93	8.00e-68	252.00
IUUC-Cne-026923	Cryptococcus neoformans	32.71	4.00e-68	253.00
IUUC-Dre-028227	Danio rerio	61.50	0.00e+00	966.00
IUUC-Dno-029830	Dasypus novemcinctus	81.67	0.00e+00	1783.00
IUUC-Dor-030436	Dipodomys ordii	85.54	0.00e+00	1137.00
IUUC-Dse-031485	Dothistroma septosporum	32.25	1.00e-93	338.00
IUUC-Dme-031875	Drosophila melanogaster	36.27	1.00e-120	427.00
IUUC-Eca-033415	Equus caballus	85.80	0.00e+00	1071.00
IUUC-Eeu-034528	Erinaceus europaeus	81.86	0.00e+00	907.00
IUUC-Fca-036238	Felis catus	88.51	0.00e+00	1265.00
IUUC-Fal-037124	Ficedula albicollis	61.37	0.00e+00	1156.00
IUUC-Fox-038075	Fusarium oxysporum	41.46	6.00e-05	43.10
IUUC-Fso-038310	Fusarium solani	30.92	2.00e-78	287.00
IUUC-Gmo-039506	Gadus morhua	60.16	0.00e+00	878.00
IUUC-Ggr-039984	Gaeumannomyces graminis	32.90	2.00e-99	357.00
IUUC-Gga-040674	Gallus gallus	68.89	0.00e+00	1023.00
IUUC-Gac-041416	Gasterosteus aculeatus	60.89	0.00e+00	894.00
IUUC-Gma-043625	Glycine max	36.18	1.00e-117	418.00
IUUC-Ggo-045017	Gorilla gorilla	87.11	0.00e+00	1882.00
IUUC-Hsa-046870	Homo sapiens	87.41	0.00e+00	1891.00
IUUC-Hvu-047466	Hordeum vulgare	35.50	2.00e-71	263.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	81.32	0.00e+00	670.00
IUUC-Kpa-049244	Komagataella pastoris	27.62	3.00e-57	216.00
IUUC-Lch-050376	Latimeria chalumnae	55.23	0.00e+00	1095.00
IUUC-Lpe-050955	Leersia perrieri	34.48	5.00e-89	322.00
IUUC-Loc-051948	Lepisosteus oculatus	51.44	0.00e+00	1051.00
IUUC-Lma-052950	Leptosphaeria maculans	32.49	3.00e-88	320.00
IUUC-Laf-054206	Loxodonta africana	86.50	0.00e+00	1240.00
IUUC-Mcc-055005	Macaca mulatta	86.96	0.00e+00	1874.00
IUUC-Meu-056120	Macropus eugenii	59.02	0.00e+00	665.00
IUUC-Mor-057238	Magnaporthe oryzae	32.01	1.00e-92	335.00
IUUC-Mpo-057574	Magnaporthe poae	32.21	8.00e-98	352.00
IUUC-Mtr-057823	Medicago truncatula	36.54	3.00e-107	383.00
IUUC-Mla-058822	Melampsora laricipopulina	31.23	4.00e-82	299.00
IUUC-Mga-059785	Meleagris gallopavo	48.42	6.00e-164	570.00
IUUC-Mvi-060543	Microbotryum violaceum	32.23	1.00e-81	298.00
IUUC-Mmr-060611	Microcebus murinus	85.80	0.00e+00	1828.00
IUUC-Mdo-062719	Monodelphis domestica	66.64	0.00e+00	1405.00
IUUC-Mmu-064376	Mus musculus	83.65	0.00e+00	1772.00
IUUC-Mac-064834	Musa acuminata	32.82	1.00e-87	317.00
IUUC-Mpu-066298	Mustela putorius furo	86.86	0.00e+00	1875.00
IUUC-Mlu-067546	Myotis lucifugus	85.26	0.00e+00	1858.00
IUUC-Nfi-068388	Neosartorya fischeri	30.03	1.00e-79	291.00
IUUC-Ncr-068875	Neurospora crassa	30.80	3.00e-89	323.00
IUUC-Nle-069813	Nomascus leucogenys	86.70	0.00e+00	1879.00
IUUC-Opr-070995	Ochotona princeps	75.37	0.00e+00	1273.00
IUUC-Ont-072084	Oreochromis niloticus	61.93	0.00e+00	949.00
IUUC-Oan-073545	Ornithorhynchus anatinus	54.86	0.00e+00	1067.00
IUUC-Oba-075828	Oryza barthii	35.12	2.00e-92	333.00
IUUC-Obr-076373	Oryza brachyantha	33.76	1.00e-68	254.00
IUUC-Ogl-077043	Oryza glaberrima	36.34	4.00e-103	369.00
IUUC-Ogu-078647	Oryza glumaepatula	36.18	1.00e-100	361.00
IUUC-Oin-079793	Oryza indica	34.38	5.00e-74	272.00
IUUC-Olo-080815	Oryza longistaminata	35.32	6.00e-93	335.00
IUUC-Ome-081650	Oryza meridionalis	36.26	6.00e-105	375.00
IUUC-Oni-082708	Oryza nivara	36.13	2.00e-104	374.00
IUUC-Opu-084078	Oryza punctata	36.58	2.00e-101	363.00
IUUC-Oru-084549	Oryza rufipogon	35.95	3.00e-104	373.00
IUUC-Osa-086095	Oryza sativa	34.25	5.00e-86	312.00
IUUC-Olu-087617	Ostreococcus lucimarinus	34.81	2.00e-10	61.20
IUUC-Oga-088453	Otolemur garnettii	83.57	0.00e+00	1787.00
IUUC-Oar-089769	Ovis aries	85.64	0.00e+00	1873.00
IUUC-Ptr-090803	Pan troglodytes	87.41	0.00e+00	1891.00
IUUC-Pan-092169	Papio anubis	87.05	0.00e+00	1894.00
IUUC-Psi-094065	Pelodiscus sinensis	59.21	0.00e+00	1290.00
IUUC-Pma-094592	Petromyzon marinus	53.00	0.00e+00	795.00
IUUC-Pno-095016	Phaeosphaeria nodorum	37.84	1.00e-14	73.60
IUUC-Ppa-095597	Physcomitrella patens	34.39	1.00e-109	391.00
IUUC-Pfo-096959	Poecilia formosa	62.29	0.00e+00	976.00
IUUC-Pab-097732	Pongo abelii	88.81	0.00e+00	1165.00
IUUC-Pop-099062	Populus trichocarpa	36.28	3.00e-123	436.00
IUUC-Pca-100219	Procavia capensis	69.92	0.00e+00	1383.00
IUUC-Ppe-101695	Prunus persica	36.15	6.00e-122	432.00
IUUC-Pva-102402	Pteropus vampyrus	79.29	0.00e+00	1662.00
IUUC-Pgr-103317	Puccinia graminis	27.63	3.00e-76	280.00
IUUC-Ptt-103771	Puccinia triticina	27.13	7.00e-65	243.00
IUUC-Pte-104189	Pyrenophora teres	31.25	7.00e-09	55.80
IUUC-Pyt-104801	Pyrenophora triticirepentis	31.49	8.00e-86	311.00
IUUC-Rno-105721	Rattus norvegicus	83.56	0.00e+00	1801.00
IUUC-Sce-106350	Saccharomyces cerevisiae	28.47	1.00e-69	258.00
IUUC-Sha-106801	Sarcophilus harrisii	66.49	0.00e+00	1396.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	33.25	3.00e-100	359.00
IUUC-Spo-108253	Schizosaccharomyces pombe	32.93	1.00e-100	361.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	34.35	1.00e-58	221.00
IUUC-Smo-108865	Selaginella moellendorffii	36.38	1.00e-105	377.00
IUUC-Sit-110153	Setaria italica	35.84	6.00e-108	385.00
IUUC-Sly-111638	Solanum lycopersicum	36.64	2.00e-118	420.00
IUUC-Stu-112099	Solanum tuberosum	36.86	4.00e-119	422.00
IUUC-Sar-113030	Sorex araneus	84.40	0.00e+00	658.00
IUUC-Sbi-113944	Sorghum bicolor	36.14	8.00e-111	395.00
IUUC-Sre-115206	Sporisorium reilianum	31.11	2.00e-90	327.00
IUUC-Ssc-115729	Sus scrofa	81.92	0.00e+00	717.00
IUUC-Tgu-117520	Taeniopygia guttata	61.95	0.00e+00	917.00
IUUC-Tru-118487	Takifugu rubripes	61.76	0.00e+00	955.00
IUUC-Tsy-119363	Tarsius syrichta	82.68	0.00e+00	1747.00
IUUC-Tca-121813	Theobroma cacao	34.75	9.00e-119	421.00
IUUC-Tre-122248	Trichoderma reesei	32.64	2.00e-84	307.00
IUUC-Tvi-122462	Trichoderma virens	33.50	9.00e-93	335.00
IUUC-Tae-123637	Triticum aestivum	36.16	3.00e-103	370.00
IUUC-Tur-126173	Triticum urartu	36.19	1.00e-93	337.00
IUUC-Tme-127213	Tuber melanosporum	31.85	5.00e-94	339.00
IUUC-Tbe-127399	Tupaia belangeri	80.99	0.00e+00	723.00
IUUC-Ttr-128798	Tursiops truncatus	84.50	0.00e+00	799.00
IUUC-Uma-129421	Ustilago maydis	30.21	5.00e-88	319.00
IUUC-Vda-129863	Verticillium dahliae	29.26	1.00e-79	291.00
IUUC-Vvi-131615	Vitis vinifera	35.52	5.00e-125	442.00
IUUC-Xtr-132309	Xenopus tropicalis	55.22	0.00e+00	1080.00
IUUC-Xma-133235	Xiphophorus maculatus	61.40	0.00e+00	931.00
IUUC-Yli-134536	Yarrowia lipolytica	29.66	2.00e-79	290.00
IUUC-Zma-135358	Zea mays	36.28	3.00e-105	376.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence