iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	5.40e-13	49.6	220	292

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 3    teqatlqiRlpdGkrlvrkFpssttleqiyqfve.yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgs 76
           ++++++qiRlp+++rlv  F++s+tle+++ f+   +  +   pF++++++P +++++e++  tl++a++++s +
   Q: 220  EPTTNIQIRLPNNQRLVGIFNHSHTLEAVRTFICtARPDMIYAPFQMMAAYPPKPFEDESQ--TLKDANVLNSVV 292
           6799******************************888999999******************..******999875 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSRNIRTFRD IGNNDDGGPD SDDSGADAAE RGAPQEFYAG SGQAVQGPRG AAARGPDSEA 60
HIRRILQAAE VVQPEGGEAP RGRPSGRETI SLTLHLWSDG LSIEDGPLMS RQDPRTIEFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAAACCTT CAATTTTCCA CCACAAAACC CCGGAAAAAA TGAGCAGAAA GTGAGTGTCG 60
CCCGCGATTT TCAACCTCAA AAATCGATAA ATTACTTGCA GTATTCGCAC GTTTCGTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR012989--SEP_domain
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0048471--C:perinuclear region of cytoplasm
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

cel:CELE_Y94H6A.9

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000707	Aegilops tauschii	29.54	5.00e-21	93.60
IUUC-Aml-001919	Ailuropoda melanoleuca	40.18	2.00e-39	154.00
IUUC-Atr-002543	Amborella trichopoda	29.11	1.00e-23	102.00
IUUC-Apl-003388	Anas platyrhynchos	38.71	1.00e-38	152.00
IUUC-Aca-005210	Anolis carolinensis	36.94	5.00e-37	147.00
IUUC-Aly-006329	Arabidopsis lyrata	29.83	3.00e-18	84.30
IUUC-Ath-007064	Arabidopsis thaliana	29.31	3.00e-18	84.00
IUUC-Ago-007933	Ashbya gossypii	26.29	2.00e-07	48.90
IUUC-Acl-008176	Aspergillus clavatus	30.28	4.00e-21	94.40
IUUC-Afl-008553	Aspergillus flavus	30.46	4.00e-19	87.40
IUUC-Afu-008919	Aspergillus fumigatus	28.27	4.00e-22	97.80
IUUC-Ani-009398	Aspergillus nidulans	28.99	2.00e-23	101.00
IUUC-Ang-009594	Aspergillus niger	30.88	3.00e-20	91.30
IUUC-Aor-010016	Aspergillus oryzae	30.46	4.00e-19	87.80
IUUC-Ate-010455	Aspergillus terreus	31.25	2.00e-27	115.00
IUUC-Ame-011089	Astyanax mexicanus	35.32	5.00e-33	133.00
IUUC-Bgr-012256	Blumeria graminis	31.41	7.00e-22	97.10
IUUC-Bta-012898	Bos taurus	39.27	8.00e-39	152.00
IUUC-Bci-013750	Botrytis cinerea	28.42	5.00e-17	80.90
IUUC-Bdi-014204	Brachypodium distachyon	29.18	7.00e-22	97.10
IUUC-Bol-016173	Brassica oleracea	31.19	5.00e-19	86.70
IUUC-Bra-017734	Brassica rapa	26.99	6.00e-18	83.20
IUUC-Cja-018993	Callithrix jacchus	39.17	1.00e-38	152.00
IUUC-Cfa-020958	Canis familiaris	40.18	2.00e-39	154.00
IUUC-Cpo-021417	Cavia porcellus	39.63	5.00e-39	153.00
IUUC-Csa-023244	Chlorocebus sabaeus	39.17	1.00e-38	152.00
IUUC-Cho-024683	Choloepus hoffmanni	27.60	8.00e-12	62.40
IUUC-Cin-025686	Ciona intestinalis	32.74	1.00e-29	122.00
IUUC-Csv-025945	Ciona savignyi	34.29	6.00e-30	123.00
IUUC-Cgl-026628	Colletotrichum gloeosporioides	29.17	2.00e-14	72.00
IUUC-Cne-026798	Cryptococcus neoformans	33.18	5.00e-23	100.00
IUUC-Cme-027347	Cyanidioschyzon merolae	25.48	7.00e-18	83.20
IUUC-Dre-028748	Danio rerio	32.09	1.00e-31	129.00
IUUC-Dno-029977	Dasypus novemcinctus	40.09	3.00e-39	154.00
IUUC-Dor-030203	Dipodomys ordii	40.57	6.00e-40	156.00
IUUC-Dse-031256	Dothistroma septosporum	33.00	1.00e-22	99.40
IUUC-Dme-031878	Drosophila melanogaster	31.22	2.00e-25	108.00
IUUC-Ete-032997	Echinops telfairi	38.81	1.00e-37	149.00
IUUC-Eca-034132	Equus caballus	39.62	1.00e-38	152.00
IUUC-Eeu-035097	Erinaceus europaeus	44.90	2.00e-08	52.40
IUUC-Fca-036037	Felis catus	40.18	3.00e-39	154.00
IUUC-Fal-037100	Ficedula albicollis	37.79	2.00e-37	148.00
IUUC-Fso-038190	Fusarium solani	26.73	2.00e-13	68.60
IUUC-Gmo-039429	Gadus morhua	32.39	7.00e-30	123.00
IUUC-Ggr-039971	Gaeumannomyces graminis	25.00	7.00e-05	40.40
IUUC-Gga-040864	Gallus gallus	38.21	4.00e-37	147.00
IUUC-Gac-041589	Gasterosteus aculeatus	32.24	6.00e-30	123.00
IUUC-Gma-044296	Glycine max	28.72	1.00e-21	95.50
IUUC-Ggo-044601	Gorilla gorilla	39.17	1.00e-38	152.00
IUUC-Hsa-045773	Homo sapiens	39.17	1.00e-38	152.00
IUUC-Hvu-047203	Hordeum vulgare	30.23	2.00e-21	94.40
IUUC-Itr-047949	Ictidomys tridecemlineatus	38.25	1.00e-37	149.00
IUUC-Kpa-049322	Komagataella pastoris	27.87	4.00e-15	74.30
IUUC-Lch-050608	Latimeria chalumnae	36.70	2.00e-35	142.00
IUUC-Lpe-051122	Leersia perrieri	25.75	6.00e-19	87.40
IUUC-Loc-052555	Lepisosteus oculatus	30.77	1.00e-32	132.00
IUUC-Lma-053319	Leptosphaeria maculans	30.93	7.00e-17	80.50
IUUC-Laf-054237	Loxodonta africana	41.10	2.00e-40	157.00
IUUC-Mcc-055472	Macaca mulatta	39.17	1.00e-38	152.00
IUUC-Meu-056093	Macropus eugenii	37.74	1.00e-23	102.00
IUUC-Mor-057220	Magnaporthe oryzae	29.36	7.00e-20	90.10
IUUC-Mpo-057595	Magnaporthe poae	23.12	3.00e-12	64.70
IUUC-Mtr-058376	Medicago truncatula	30.04	5.00e-20	90.50
IUUC-Mla-059077	Melampsora laricipopulina	32.04	2.00e-23	102.00
IUUC-Mga-059836	Meleagris gallopavo	37.79	4.00e-37	147.00
IUUC-Mvi-060292	Microbotryum violaceum	31.63	2.00e-23	102.00
IUUC-Mmr-060897	Microcebus murinus	39.62	3.00e-38	150.00
IUUC-Mdo-062066	Monodelphis domestica	38.97	6.00e-38	150.00
IUUC-Mmu-063686	Mus musculus	40.18	9.00e-39	152.00
IUUC-Mac-065403	Musa acuminata	27.14	2.00e-18	85.90
IUUC-Mpu-065688	Mustela putorius furo	40.18	2.00e-39	154.00
IUUC-Mlu-067566	Myotis lucifugus	38.25	3.00e-38	150.00
IUUC-Nfi-068609	Neosartorya fischeri	29.95	3.00e-21	94.70
IUUC-Ncr-068786	Neurospora crassa	28.35	3.00e-16	78.60
IUUC-Nle-069169	Nomascus leucogenys	38.71	3.00e-38	150.00
IUUC-Opr-070979	Ochotona princeps	40.37	3.00e-39	154.00
IUUC-Ont-071803	Oreochromis niloticus	34.15	2.00e-31	128.00
IUUC-Oan-073007	Ornithorhynchus anatinus	32.89	1.00e-30	125.00
IUUC-Ocu-074276	Oryctolagus cuniculus	39.17	2.00e-38	152.00
IUUC-Oba-075230	Oryza barthii	28.57	2.00e-20	92.80
IUUC-Obr-076164	Oryza brachyantha	26.05	2.00e-15	74.30
IUUC-Ogl-077527	Oryza glaberrima	29.03	3.00e-20	91.70
IUUC-Ogu-078417	Oryza glumaepatula	29.03	1.00e-20	92.80
IUUC-Oin-079640	Oryza indica	28.57	1.00e-20	93.20
IUUC-Olo-080254	Oryza longistaminata	27.54	1.00e-17	82.80
IUUC-Ome-081766	Oryza meridionalis	26.90	6.00e-19	88.60
IUUC-Oni-082274	Oryza nivara	28.37	2.00e-19	89.40
IUUC-Opu-083365	Oryza punctata	27.56	2.00e-21	95.50
IUUC-Oru-084725	Oryza rufipogon	29.03	1.00e-20	92.80
IUUC-Osa-085730	Oryza sativa	29.03	1.00e-20	92.80
IUUC-Ola-086761	Oryzias latipes	33.79	1.00e-29	122.00
IUUC-Olu-087598	Ostreococcus lucimarinus	29.13	3.00e-25	107.00
IUUC-Oga-088533	Otolemur garnettii	40.09	5.00e-39	153.00
IUUC-Oar-089450	Ovis aries	39.73	6.00e-39	153.00
IUUC-Ptr-090926	Pan troglodytes	39.17	1.00e-38	152.00
IUUC-Pan-092100	Papio anubis	39.17	1.00e-38	152.00
IUUC-Psi-093446	Pelodiscus sinensis	39.22	3.00e-35	140.00
IUUC-Pma-094475	Petromyzon marinus	32.58	8.00e-30	122.00
IUUC-Pno-094769	Phaeosphaeria nodorum	31.96	3.00e-21	95.10
IUUC-Ppa-095833	Physcomitrella patens	32.54	1.00e-22	99.80
IUUC-Pfo-096193	Poecilia formosa	32.42	1.00e-32	132.00
IUUC-Pab-097971	Pongo abelii	39.17	1.00e-38	152.00
IUUC-Pop-098970	Populus trichocarpa	26.83	8.00e-19	86.70
IUUC-Pca-100985	Procavia capensis	45.83	4.00e-14	70.90
IUUC-Ppe-101417	Prunus persica	26.65	3.00e-21	94.70
IUUC-Pva-102504	Pteropus vampyrus	39.73	5.00e-39	153.00
IUUC-Pgr-103447	Puccinia graminis	30.05	1.00e-23	103.00
IUUC-Ptt-103729	Puccinia triticina	31.48	1.00e-24	106.00
IUUC-Pte-104083	Pyrenophora teres	31.23	2.00e-24	105.00
IUUC-Pyt-104504	Pyrenophora triticirepentis	32.47	3.00e-20	91.30
IUUC-Rno-105448	Rattus norvegicus	40.18	1.00e-38	152.00
IUUC-Sce-106457	Saccharomyces cerevisiae	29.49	5.00e-17	80.90
IUUC-Sha-106777	Sarcophilus harrisii	46.15	2.00e-06	44.30
IUUC-Sja-107717	Schizosaccharomyces japonicus	27.73	8.00e-18	83.20
IUUC-Spo-108358	Schizosaccharomyces pombe	31.90	2.00e-17	82.40
IUUC-Smo-109489	Selaginella moellendorffii	26.38	2.00e-14	71.60
IUUC-Sit-110491	Setaria italica	29.44	6.00e-21	94.00
IUUC-Sly-111135	Solanum lycopersicum	27.56	1.00e-21	95.90
IUUC-Stu-112733	Solanum tuberosum	27.21	4.00e-21	94.40
IUUC-Sar-113445	Sorex araneus	37.36	2.00e-11	61.60
IUUC-Sbi-114761	Sorghum bicolor	30.70	2.00e-21	95.10
IUUC-Sre-115176	Sporisorium reilianum	35.12	8.00e-27	113.00
IUUC-Ssc-116008	Sus scrofa	40.18	2.00e-39	155.00
IUUC-Tgu-117238	Taeniopygia guttata	38.25	1.00e-38	152.00
IUUC-Tru-118521	Takifugu rubripes	31.31	5.00e-30	123.00
IUUC-Tsy-119015	Tarsius syrichta	32.69	6.00e-29	120.00
IUUC-Tni-119705	Tetraodon nigroviridis	31.96	3.00e-33	134.00
IUUC-Tca-121370	Theobroma cacao	27.50	2.00e-15	75.50
IUUC-Tre-121941	Trichoderma reesei	25.62	1.00e-13	69.70
IUUC-Tvi-122602	Trichoderma virens	26.89	6.00e-13	67.00
IUUC-Tae-124040	Triticum aestivum	28.66	6.00e-23	100.00
IUUC-Tur-126464	Triticum urartu	29.49	5.00e-21	93.20
IUUC-Tme-127193	Tuber melanosporum	29.37	3.00e-21	95.10
IUUC-Tbe-127716	Tupaia belangeri	38.68	7.00e-36	142.00
IUUC-Ttr-128262	Tursiops truncatus	39.73	5.00e-39	153.00
IUUC-Uma-129600	Ustilago maydis	35.29	1.00e-27	116.00
IUUC-Vda-129743	Verticillium dahliae	29.00	7.00e-17	80.50
IUUC-Vpa-130068	Vicugna pacos	38.95	3.00e-30	124.00
IUUC-Vvi-131338	Vitis vinifera	27.49	7.00e-18	83.20
IUUC-Xtr-132381	Xenopus tropicalis	30.19	1.00e-20	92.00
IUUC-Xma-133944	Xiphophorus maculatus	31.96	6.00e-32	130.00
IUUC-Yli-134604	Yarrowia lipolytica	26.32	1.00e-14	72.80
IUUC-Zma-135978	Zea mays	31.55	3.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence