iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058667

Ensembl Protein ID

AES66007

UniProt Accession

G7IGS9; A0A0C3V3R7; G7IGS9_MEDTR

Genbank Protein ID

AES66007.2

Protein Name

Cleavage stimulation factor 50 kDa subunit

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g060520

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g060520	KEH38145	KEH38145
MTR_2g060520	AES66007	AES66007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-26	90.2	181	211
UBD/Beta-Prp	4.30e-57	195.0	124	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H  +v++l+f +  t+lvsG+ D tik +D+
   Q: 181  HIQPVNDLDFnPQgTILVSGAKDQTIKFFDI 211
           8899******9667****************7 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..g 92
           +hk+v +c  fspd++++atgs+d +ik+++v++ k               ++++++h ++v++++f+p+g ilv+g++D+tik +d+s+    ++++  +
   Q: 124  EHKNVARCARFSPDGRFVATGSADTSIKLFEVSKIKQmllpdakdgpvrsvVKTYYDHIQPVNDLDFNPQGTILVSGAKDQTIKFFDISKTNAKRSYRviQ 224
           7999******************************9999***************************************************888888888889 PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh.tdsvyslsfd 189
            +++v+s+sf+psgd+l++G+++ + +++d++t qc+ +   ++++ +g++n v+++++g+++v++s+D+++rlWd  t++++r  t +h t   +s  f+
   Q: 225  DTHNVRSVSFHPSGDFLLAGTDHAIPHLYDINTFQCYLSaniPDANPNGAINQVRYSCSGSMYVTASKDGAIRLWDGITANCVRSITAAHgTAEATSAVFT 325
           9*************************************************************************************9988345678888** PP
   S: 190  sngkelvsgsldgtvklwdlqtgecvrtlng..htdnvksvrfspnderlvs 239
           s++++++s+++d+t+klw++ +g+ v+++ g  ht+  ++  f   +e+++s
   Q: 326  SDQRFVLSCGKDSTIKLWEVGSGRLVKQYLGaiHTQLRCQAIFNATEEFILS 377
           ****************************999777777777777788888877 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MENSSSRSEQ TVEDGKLYRH LNSLIVAHLR HNNLTQAATA VASATMTPFN VQAPPNKLLQ 60
LLSKGLAAEK DDLPRGISSS PFQDLGASLP LPRPGATTID FSSLSDIKGS SKSFPKHETR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACACTCTA AAACTACTGT AGACAAAAGG AAACAAAAAT GGAAAACAGT AGTAGTAGGT 60
CGGAGCAGAC AGTTGAAGAT GGGAAACTGT ATAGACACCT CAATTCTCTT ATCGTCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_2g060520

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	38.08	1.00e-78	286.00
IUUC-Atr-002687	Amborella trichopoda	61.91	9.00e-180	622.00
IUUC-Apl-003438	Anas platyrhynchos	38.55	2.00e-79	289.00
IUUC-Aca-005178	Anolis carolinensis	38.32	3.00e-79	288.00
IUUC-Aly-005791	Arabidopsis lyrata	64.88	2.00e-172	597.00
IUUC-Ath-006689	Arabidopsis thaliana	65.88	6.00e-172	596.00
IUUC-Ame-011217	Astyanax mexicanus	44.44	3.00e-62	231.00
IUUC-Bta-012619	Bos taurus	38.55	8.00e-79	286.00
IUUC-Bdi-014515	Brachypodium distachyon	62.27	4.00e-157	546.00
IUUC-Bra-017450	Brassica rapa	59.52	1.00e-155	541.00
IUUC-Cel-018151	Caenorhabditis elegans	34.57	5.00e-67	247.00
IUUC-Cja-019304	Callithrix jacchus	38.08	7.00e-79	286.00
IUUC-Cfa-020208	Canis familiaris	38.08	1.00e-78	286.00
IUUC-Cpo-022245	Cavia porcellus	38.08	1.00e-78	286.00
IUUC-Csa-023066	Chlorocebus sabaeus	38.08	7.00e-79	286.00
IUUC-Cho-024770	Choloepus hoffmanni	41.36	2.00e-75	275.00
IUUC-Cin-025621	Ciona intestinalis	32.87	3.00e-64	238.00
IUUC-Csv-026071	Ciona savignyi	35.17	2.00e-72	265.00
IUUC-Dre-028254	Danio rerio	37.88	4.00e-77	281.00
IUUC-Dno-029903	Dasypus novemcinctus	38.08	1.00e-78	286.00
IUUC-Dor-030423	Dipodomys ordii	38.08	2.00e-78	285.00
IUUC-Dme-031993	Drosophila melanogaster	32.17	6.00e-65	240.00
IUUC-Eca-033316	Equus caballus	38.08	1.00e-78	286.00
IUUC-Eeu-035001	Erinaceus europaeus	37.64	2.00e-78	285.00
IUUC-Fca-036447	Felis catus	38.08	1.00e-78	286.00
IUUC-Fal-037601	Ficedula albicollis	38.55	2.00e-79	289.00
IUUC-Gmo-038531	Gadus morhua	38.00	7.00e-74	270.00
IUUC-Gga-040869	Gallus gallus	38.55	3.00e-79	288.00
IUUC-Gac-042380	Gasterosteus aculeatus	37.78	1.00e-77	282.00
IUUC-Gma-043478	Glycine max	84.99	0.00e+00	780.00
IUUC-Ggo-045302	Gorilla gorilla	38.08	7.00e-79	286.00
IUUC-Hsa-045678	Homo sapiens	38.08	7.00e-79	286.00
IUUC-Hvu-047301	Hordeum vulgare	64.00	2.00e-157	548.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	38.08	1.00e-78	286.00
IUUC-Lch-050319	Latimeria chalumnae	38.18	4.00e-79	288.00
IUUC-Lpe-051440	Leersia perrieri	49.41	1.00e-134	472.00
IUUC-Loc-052035	Lepisosteus oculatus	38.55	1.00e-78	286.00
IUUC-Laf-054275	Loxodonta africana	38.08	1.00e-78	286.00
IUUC-Mcc-055857	Macaca mulatta	33.41	8.00e-61	226.00
IUUC-Mga-059710	Meleagris gallopavo	38.55	3.00e-79	288.00
IUUC-Mmr-060604	Microcebus murinus	38.08	1.00e-78	286.00
IUUC-Mdo-062953	Monodelphis domestica	38.55	7.00e-79	286.00
IUUC-Mmu-064292	Mus musculus	38.32	8.00e-79	286.00
IUUC-Mac-064568	Musa acuminata	75.68	2.00e-161	561.00
IUUC-Mpu-066294	Mustela putorius furo	43.46	8.00e-49	187.00
IUUC-Mlu-067279	Myotis lucifugus	36.71	3.00e-79	288.00
IUUC-Nle-069322	Nomascus leucogenys	38.08	7.00e-79	286.00
IUUC-Opr-070580	Ochotona princeps	38.55	1.00e-78	286.00
IUUC-Ont-072554	Oreochromis niloticus	37.85	8.00e-78	283.00
IUUC-Oan-072856	Ornithorhynchus anatinus	38.32	2.00e-78	285.00
IUUC-Ocu-074150	Oryctolagus cuniculus	39.19	4.00e-66	244.00
IUUC-Oba-075585	Oryza barthii	57.92	4.00e-151	527.00
IUUC-Obr-076069	Oryza brachyantha	64.52	3.00e-156	544.00
IUUC-Ogl-077045	Oryza glaberrima	63.82	6.00e-166	576.00
IUUC-Ogu-078697	Oryza glumaepatula	64.13	1.00e-158	553.00
IUUC-Oin-080119	Oryza indica	63.82	6.00e-166	576.00
IUUC-Olo-081093	Oryza longistaminata	51.42	2.00e-93	337.00
IUUC-Ome-081718	Oryza meridionalis	54.15	6.00e-133	467.00
IUUC-Oni-082072	Oryza nivara	57.92	4.00e-151	527.00
IUUC-Opu-084080	Oryza punctata	54.86	1.00e-127	448.00
IUUC-Oru-085070	Oryza rufipogon	60.05	8.00e-151	527.00
IUUC-Osa-086149	Oryza sativa	63.82	6.00e-166	576.00
IUUC-Ola-086697	Oryzias latipes	38.08	1.00e-77	283.00
IUUC-Oga-088697	Otolemur garnettii	38.08	1.00e-78	286.00
IUUC-Oar-089774	Ovis aries	38.08	1.00e-78	286.00
IUUC-Ptr-090924	Pan troglodytes	38.08	7.00e-79	286.00
IUUC-Pan-092373	Papio anubis	38.08	1.00e-78	286.00
IUUC-Psi-094001	Pelodiscus sinensis	38.55	5.00e-79	287.00
IUUC-Pma-094274	Petromyzon marinus	35.70	6.00e-73	267.00
IUUC-Ppa-095562	Physcomitrella patens	64.86	9.00e-173	598.00
IUUC-Pfo-097235	Poecilia formosa	38.08	1.00e-77	282.00
IUUC-Pab-098608	Pongo abelii	38.08	7.00e-79	286.00
IUUC-Pca-100268	Procavia capensis	38.55	8.00e-79	286.00
IUUC-Ppe-101425	Prunus persica	74.15	0.00e+00	687.00
IUUC-Pva-103183	Pteropus vampyrus	38.08	1.00e-78	286.00
IUUC-Rno-105097	Rattus norvegicus	38.32	8.00e-79	286.00
IUUC-Sha-107642	Sarcophilus harrisii	38.55	7.00e-79	286.00
IUUC-Smo-108680	Selaginella moellendorffii	60.24	2.00e-155	541.00
IUUC-Sit-110471	Setaria italica	64.17	3.00e-166	578.00
IUUC-Sly-111143	Solanum lycopersicum	65.77	2.00e-98	351.00
IUUC-Stu-111926	Solanum tuberosum	77.50	3.00e-77	280.00
IUUC-Sar-112947	Sorex araneus	43.70	1.00e-62	232.00
IUUC-Sbi-113769	Sorghum bicolor	64.55	5.00e-162	563.00
IUUC-Ssc-115736	Sus scrofa	38.08	1.00e-78	286.00
IUUC-Tgu-117457	Taeniopygia guttata	38.55	2.00e-79	289.00
IUUC-Tru-117760	Takifugu rubripes	38.08	1.00e-77	282.00
IUUC-Tsy-118943	Tarsius syrichta	37.38	7.00e-75	273.00
IUUC-Tni-120081	Tetraodon nigroviridis	37.62	4.00e-77	281.00
IUUC-Tca-121190	Theobroma cacao	76.69	0.00e+00	710.00
IUUC-Tae-125535	Triticum aestivum	64.49	5.00e-154	536.00
IUUC-Tur-126329	Triticum urartu	68.79	4.00e-147	514.00
IUUC-Tbe-127878	Tupaia belangeri	37.38	1.00e-77	283.00
IUUC-Ttr-128985	Tursiops truncatus	38.08	1.00e-78	286.00
IUUC-Vpa-130147	Vicugna pacos	38.08	2.00e-78	285.00
IUUC-Vvi-130935	Vitis vinifera	73.17	0.00e+00	684.00
IUUC-Xtr-132482	Xenopus tropicalis	37.85	1.00e-77	283.00
IUUC-Xma-133929	Xiphophorus maculatus	38.08	1.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence