iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022748

Ensembl Protein ID

EDO99623

UniProt Accession

A8J980; A8J980_CHLRE

Genbank Protein ID

EDO99623.1

Protein Name

mRNA export protein

Genbank Nucleotide ID

DS496145

Gene Name

RAE1; CHLREDRAFT_138990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_138990	EDO99623	EDO99623

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-16	58.9	110	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v ++a+ +  +ll++Gs+D+t + WD+r+ ++ 
   Q: 110  HDAPVKAVAWcPQmNLLITGSWDKTFRYWDTRSPTPA 146
           999********777****************9998765 PP

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MFGAQAQAKP AHNPNGDLEV PAPGDMDSIS SLTFSPTSDF FAVTSWNNSA YVWQYNQQGQ 60
TFAKAQNAGT QPVLASAWKN DGSGIFLAGC DKAVRLWDLA SNQAVQVAMH DAPVKAVAWC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACAGTGCTA ATATCTACAC CCCTATAACA ACTTGTTCTC GAGGACCGGA ACTGGTTTAA 60
GATCGTGACC TTCGCGGGCT TGGGCCCCGG AGCCCTTCCC TTTACTCTTT AGTTTGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

cre:CHLREDRAFT_138990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	50.42	4.00e-94	336.00
IUUC-Aml-002179	Ailuropoda melanoleuca	45.45	1.00e-82	298.00
IUUC-Atr-002609	Amborella trichopoda	53.71	1.00e-101	361.00
IUUC-Apl-003637	Anas platyrhynchos	46.02	4.00e-85	306.00
IUUC-Aca-005042	Anolis carolinensis	46.31	5.00e-85	306.00
IUUC-Aly-006015	Arabidopsis lyrata	53.65	9.00e-107	378.00
IUUC-Ath-007659	Arabidopsis thaliana	53.09	3.00e-105	372.00
IUUC-Ago-008004	Ashbya gossypii	42.77	3.00e-79	286.00
IUUC-Acl-008030	Aspergillus clavatus	48.65	3.00e-83	300.00
IUUC-Afl-008636	Aspergillus flavus	47.52	6.00e-83	298.00
IUUC-Afu-009121	Aspergillus fumigatus	47.23	6.00e-82	295.00
IUUC-Ani-009238	Aspergillus nidulans	47.08	3.00e-82	296.00
IUUC-Ang-009801	Aspergillus niger	48.02	2.00e-84	304.00
IUUC-Aor-009974	Aspergillus oryzae	47.52	6.00e-83	298.00
IUUC-Ate-010406	Aspergillus terreus	48.19	3.00e-83	300.00
IUUC-Ame-011368	Astyanax mexicanus	44.48	5.00e-83	299.00
IUUC-Bgr-012233	Blumeria graminis	43.73	9.00e-78	281.00
IUUC-Bta-012856	Bos taurus	45.45	1.00e-82	298.00
IUUC-Bci-013964	Botrytis cinerea	45.38	2.00e-79	286.00
IUUC-Bdi-014049	Brachypodium distachyon	54.30	5.00e-103	365.00
IUUC-Bol-015367	Brassica oleracea	53.93	9.00e-106	374.00
IUUC-Bra-016903	Brassica rapa	53.93	9.00e-106	374.00
IUUC-Cel-018563	Caenorhabditis elegans	42.82	5.00e-68	249.00
IUUC-Cja-019700	Callithrix jacchus	45.17	7.00e-83	298.00
IUUC-Cfa-020337	Canis familiaris	45.17	1.00e-82	297.00
IUUC-Cpo-021858	Cavia porcellus	45.45	6.00e-83	298.00
IUUC-Csa-023322	Chlorocebus sabaeus	45.17	5.00e-83	299.00
IUUC-Cin-025393	Ciona intestinalis	43.89	4.00e-80	289.00
IUUC-Csv-026093	Ciona savignyi	43.05	3.00e-80	290.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	36.59	1.00e-55	208.00
IUUC-Cne-026774	Cryptococcus neoformans	40.58	5.00e-68	249.00
IUUC-Cme-027243	Cyanidioschyzon merolae	35.25	5.00e-60	223.00
IUUC-Dre-028159	Danio rerio	45.04	4.00e-84	303.00
IUUC-Dno-028852	Dasypus novemcinctus	45.17	1.00e-82	297.00
IUUC-Dse-031161	Dothistroma septosporum	45.43	2.00e-72	263.00
IUUC-Dme-032009	Drosophila melanogaster	44.97	6.00e-80	288.00
IUUC-Eca-033306	Equus caballus	44.89	9.00e-82	295.00
IUUC-Fca-035579	Felis catus	45.17	1.00e-82	297.00
IUUC-Fal-037582	Ficedula albicollis	46.31	8.00e-86	308.00
IUUC-Fox-037772	Fusarium oxysporum	44.38	3.00e-77	280.00
IUUC-Fso-038368	Fusarium solani	44.02	2.00e-77	280.00
IUUC-Gmo-038500	Gadus morhua	45.61	3.00e-83	300.00
IUUC-Ggr-040019	Gaeumannomyces graminis	43.82	1.00e-74	271.00
IUUC-Gga-040684	Gallus gallus	46.31	2.00e-85	307.00
IUUC-Gac-042592	Gasterosteus aculeatus	46.18	2.00e-85	307.00
IUUC-Gma-043208	Glycine max	53.62	6.00e-105	372.00
IUUC-Ggo-044965	Gorilla gorilla	45.17	1.00e-82	298.00
IUUC-Hsa-046779	Homo sapiens	45.34	2.00e-77	281.00
IUUC-Hvu-047380	Hordeum vulgare	52.48	3.00e-96	343.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	45.45	4.00e-83	299.00
IUUC-Kpa-049284	Komagataella pastoris	44.18	1.00e-78	285.00
IUUC-Lch-050559	Latimeria chalumnae	39.73	3.00e-71	260.00
IUUC-Lpe-051050	Leersia perrieri	54.81	2.00e-104	370.00
IUUC-Loc-052874	Lepisosteus oculatus	45.89	5.00e-84	302.00
IUUC-Lma-053085	Leptosphaeria maculans	44.31	3.00e-69	253.00
IUUC-Laf-053980	Loxodonta africana	45.17	2.00e-82	297.00
IUUC-Mcc-055408	Macaca mulatta	45.17	7.00e-83	298.00
IUUC-Meu-056551	Macropus eugenii	40.63	1.00e-66	244.00
IUUC-Mor-057248	Magnaporthe oryzae	43.45	2.00e-78	284.00
IUUC-Mpo-057390	Magnaporthe poae	44.41	2.00e-74	271.00
IUUC-Mtr-057675	Medicago truncatula	53.37	3.00e-105	373.00
IUUC-Mla-059155	Melampsora laricipopulina	41.49	9.00e-82	295.00
IUUC-Mga-060140	Meleagris gallopavo	45.95	5.00e-76	275.00
IUUC-Mvi-060311	Microbotryum violaceum	43.70	1.00e-77	281.00
IUUC-Mmr-061533	Microcebus murinus	45.17	2.00e-82	297.00
IUUC-Mdo-062593	Monodelphis domestica	45.74	9.00e-84	301.00
IUUC-Mmu-063362	Mus musculus	45.17	2.00e-82	296.00
IUUC-Mac-064622	Musa acuminata	51.78	5.00e-96	342.00
IUUC-Mpu-065722	Mustela putorius furo	45.45	2.00e-82	297.00
IUUC-Mlu-068124	Myotis lucifugus	45.17	9.00e-83	298.00
IUUC-Nfi-068595	Neosartorya fischeri	47.23	1.00e-82	297.00
IUUC-Ncr-068790	Neurospora crassa	45.29	2.00e-79	287.00
IUUC-Nle-069395	Nomascus leucogenys	38.07	4.00e-61	226.00
IUUC-Opr-070320	Ochotona princeps	41.76	3.00e-72	263.00
IUUC-Ont-071303	Oreochromis niloticus	45.61	3.00e-85	306.00
IUUC-Oan-073724	Ornithorhynchus anatinus	46.02	1.00e-84	304.00
IUUC-Ocu-074961	Oryctolagus cuniculus	45.03	4.00e-77	280.00
IUUC-Oba-075250	Oryza barthii	54.98	2.00e-103	367.00
IUUC-Obr-076805	Oryza brachyantha	54.90	1.00e-105	374.00
IUUC-Ogl-077767	Oryza glaberrima	53.91	2.00e-104	370.00
IUUC-Ogu-078760	Oryza glumaepatula	54.98	2.00e-103	367.00
IUUC-Oin-080219	Oryza indica	53.91	2.00e-104	370.00
IUUC-Olo-081007	Oryza longistaminata	53.91	2.00e-104	370.00
IUUC-Ome-081848	Oryza meridionalis	52.57	4.00e-103	365.00
IUUC-Oni-082844	Oryza nivara	53.91	2.00e-104	370.00
IUUC-Opu-083511	Oryza punctata	51.08	1.00e-99	354.00
IUUC-Oru-084270	Oryza rufipogon	54.93	8.00e-105	371.00
IUUC-Osa-085287	Oryza sativa	53.91	2.00e-104	370.00
IUUC-Ola-087292	Oryzias latipes	46.18	1.00e-86	310.00
IUUC-Olu-087689	Ostreococcus lucimarinus	51.83	2.00e-102	363.00
IUUC-Oga-088821	Otolemur garnettii	45.17	1.00e-82	297.00
IUUC-Oar-090253	Ovis aries	45.17	1.00e-82	297.00
IUUC-Ptr-091097	Pan troglodytes	44.60	9.00e-82	295.00
IUUC-Pan-091835	Papio anubis	45.17	7.00e-83	298.00
IUUC-Psi-093000	Pelodiscus sinensis	46.31	3.00e-85	306.00
IUUC-Pma-094273	Petromyzon marinus	44.32	3.00e-82	296.00
IUUC-Pno-094920	Phaeosphaeria nodorum	40.72	2.00e-66	243.00
IUUC-Ppa-095202	Physcomitrella patens	53.36	4.00e-77	278.00
IUUC-Pfo-096388	Poecilia formosa	45.61	4.00e-85	306.00
IUUC-Pab-097533	Pongo abelii	45.17	7.00e-83	298.00
IUUC-Pop-099348	Populus trichocarpa	51.69	2.00e-99	353.00
IUUC-Ppe-101817	Prunus persica	54.57	3.00e-106	376.00
IUUC-Pva-102233	Pteropus vampyrus	44.89	2.00e-82	296.00
IUUC-Pgr-103342	Puccinia graminis	44.26	1.00e-85	308.00
IUUC-Ptt-103836	Puccinia triticina	43.82	2.00e-86	310.00
IUUC-Pte-104387	Pyrenophora teres	42.77	4.00e-69	253.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	43.05	7.00e-71	258.00
IUUC-Rno-105548	Rattus norvegicus	44.89	4.00e-82	296.00
IUUC-Sce-106379	Saccharomyces cerevisiae	41.79	3.00e-78	283.00
IUUC-Sha-107617	Sarcophilus harrisii	45.42	3.00e-57	213.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	44.92	1.00e-76	278.00
IUUC-Spo-108293	Schizosaccharomyces pombe	44.41	5.00e-83	299.00
IUUC-Smo-109611	Selaginella moellendorffii	51.27	2.00e-105	373.00
IUUC-Sit-110436	Setaria italica	53.43	5.00e-103	365.00
IUUC-Sly-111037	Solanum lycopersicum	52.81	7.00e-108	381.00
IUUC-Sbi-114361	Sorghum bicolor	52.74	5.00e-104	369.00
IUUC-Sre-114922	Sporisorium reilianum	35.68	2.00e-61	227.00
IUUC-Ssc-116305	Sus scrofa	45.17	2.00e-82	297.00
IUUC-Tgu-116751	Taeniopygia guttata	46.31	1.00e-85	308.00
IUUC-Tru-117798	Takifugu rubripes	46.18	2.00e-86	310.00
IUUC-Tsy-119523	Tarsius syrichta	45.88	9.00e-70	254.00
IUUC-Tni-120477	Tetraodon nigroviridis	45.92	2.00e-84	304.00
IUUC-Tca-121802	Theobroma cacao	52.75	9.00e-104	368.00
IUUC-Tre-121994	Trichoderma reesei	45.90	9.00e-78	281.00
IUUC-Tvi-122631	Trichoderma virens	45.59	2.00e-77	280.00
IUUC-Tae-124004	Triticum aestivum	55.59	2.00e-105	373.00
IUUC-Tur-126390	Triticum urartu	54.68	6.00e-104	368.00
IUUC-Tme-127152	Tuber melanosporum	45.86	6.00e-77	279.00
IUUC-Tbe-127319	Tupaia belangeri	42.37	3.00e-50	190.00
IUUC-Ttr-129207	Tursiops truncatus	44.73	4.00e-81	292.00
IUUC-Uma-129342	Ustilago maydis	36.11	4.00e-56	209.00
IUUC-Vda-129865	Verticillium dahliae	43.03	4.00e-76	276.00
IUUC-Vpa-130076	Vicugna pacos	39.93	3.00e-56	210.00
IUUC-Vvi-131104	Vitis vinifera	54.07	2.00e-105	373.00
IUUC-Xtr-132917	Xenopus tropicalis	36.62	5.00e-51	192.00
IUUC-Xma-133615	Xiphophorus maculatus	45.33	7.00e-85	305.00
IUUC-Yli-134431	Yarrowia lipolytica	43.84	2.00e-76	277.00
IUUC-Zma-135142	Zea mays	53.49	1.00e-104	370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence