iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099163

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_552052; POPTR_0002s14900g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s14900	POPTR_0002s14900.1	POPTR_0002s14900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.40e-15	55.3	165	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH dsv++l+f  d + l++++ Dg+++v+ l++
   Q: 165  GHGDSVSGLCFsYDgRSLATACADGVVRVFKLDD 198
           8**********955599*************9977 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLTIFVESSI SFAQETAVPA GCLDEDFPRQ RIKLVFNSIF SSSSGESERA KDAARRLVKK 60
PRHFSSLYPK SKLRFRKMDQ VLPIALISLL LGTAIALIFF KNYFLKRKSE IGSISEPGLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTACCA TTTTTGTTGA AAGTTCAATC TCATTTGCTC AAGAGACTGC AGTGCCTGCT 60
GGCTGTCTGG ATGGTATTCT GTTCGGATCT TCTAAAATCC GACCTAGCTT CCTTCTGTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

pop:POPTR_0002s14900g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	66.83	2.00e-74	271.00
IUUC-Aml-002212	Ailuropoda melanoleuca	30.14	2.00e-37	149.00
IUUC-Atr-002903	Amborella trichopoda	69.98	0.00e+00	640.00
IUUC-Apl-003635	Anas platyrhynchos	32.34	1.00e-36	146.00
IUUC-Aca-004472	Anolis carolinensis	30.79	3.00e-36	145.00
IUUC-Ame-011221	Astyanax mexicanus	32.61	1.00e-42	167.00
IUUC-Bta-013186	Bos taurus	30.28	7.00e-38	150.00
IUUC-Bdi-014298	Brachypodium distachyon	69.94	3.00e-147	514.00
IUUC-Cel-018602	Caenorhabditis elegans	28.34	2.00e-26	112.00
IUUC-Cfa-020970	Canis familiaris	30.95	3.00e-39	155.00
IUUC-Cpo-022215	Cavia porcellus	31.12	1.00e-36	146.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	43.82	1.00e-38	151.00
IUUC-Csa-023530	Chlorocebus sabaeus	30.56	8.00e-39	154.00
IUUC-Cho-024598	Choloepus hoffmanni	31.48	1.00e-26	113.00
IUUC-Cin-025486	Ciona intestinalis	28.79	2.00e-31	129.00
IUUC-Csv-025930	Ciona savignyi	27.78	2.00e-25	109.00
IUUC-Dre-027507	Danio rerio	32.30	2.00e-42	166.00
IUUC-Dno-029726	Dasypus novemcinctus	31.59	2.00e-36	145.00
IUUC-Dor-030501	Dipodomys ordii	36.46	1.00e-30	127.00
IUUC-Ete-032794	Echinops telfairi	36.17	2.00e-30	125.00
IUUC-Eca-033982	Equus caballus	32.35	4.00e-36	145.00
IUUC-Eeu-035090	Erinaceus europaeus	34.38	4.00e-30	125.00
IUUC-Fca-035944	Felis catus	30.56	2.00e-38	152.00
IUUC-Fal-036992	Ficedula albicollis	31.72	8.00e-37	147.00
IUUC-Gmo-038710	Gadus morhua	30.41	1.00e-40	159.00
IUUC-Gga-040885	Gallus gallus	36.71	3.00e-28	118.00
IUUC-Gac-041922	Gasterosteus aculeatus	31.53	1.00e-41	163.00
IUUC-Ggo-045172	Gorilla gorilla	29.40	1.00e-36	146.00
IUUC-Hsa-045711	Homo sapiens	30.14	3.00e-37	149.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	30.47	8.00e-37	147.00
IUUC-Lch-049739	Latimeria chalumnae	30.98	9.00e-41	160.00
IUUC-Lpe-050795	Leersia perrieri	60.05	2.00e-125	441.00
IUUC-Loc-052113	Lepisosteus oculatus	34.12	1.00e-38	153.00
IUUC-Laf-053751	Loxodonta africana	31.21	7.00e-38	150.00
IUUC-Mcc-055022	Macaca mulatta	30.56	1.00e-38	153.00
IUUC-Mtr-058500	Medicago truncatula	72.35	7.00e-177	612.00
IUUC-Mga-059278	Meleagris gallopavo	36.36	8.00e-29	120.00
IUUC-Mmr-061148	Microcebus murinus	32.83	9.00e-40	157.00
IUUC-Mmu-063607	Mus musculus	29.88	3.00e-36	145.00
IUUC-Mac-065359	Musa acuminata	65.44	2.00e-170	591.00
IUUC-Mpu-066323	Mustela putorius furo	30.64	6.00e-37	147.00
IUUC-Mlu-067946	Myotis lucifugus	31.25	1.00e-38	153.00
IUUC-Nle-069019	Nomascus leucogenys	29.67	2.00e-37	149.00
IUUC-Opr-071047	Ochotona princeps	30.56	6.00e-38	151.00
IUUC-Ont-071694	Oreochromis niloticus	34.16	1.00e-43	169.00
IUUC-Oba-075468	Oryza barthii	66.18	2.00e-147	514.00
IUUC-Obr-076681	Oryza brachyantha	71.43	7.00e-142	496.00
IUUC-Ogl-077870	Oryza glaberrima	66.18	2.00e-147	514.00
IUUC-Ogu-078536	Oryza glumaepatula	66.18	2.00e-147	514.00
IUUC-Oin-080175	Oryza indica	66.18	2.00e-147	514.00
IUUC-Olo-080796	Oryza longistaminata	71.20	1.00e-144	505.00
IUUC-Oni-082076	Oryza nivara	66.18	2.00e-147	514.00
IUUC-Opu-083267	Oryza punctata	69.69	1.00e-148	519.00
IUUC-Oru-084553	Oryza rufipogon	65.94	7.00e-147	513.00
IUUC-Osa-085389	Oryza sativa	66.18	2.00e-147	514.00
IUUC-Ola-086414	Oryzias latipes	34.78	1.00e-45	176.00
IUUC-Oar-089719	Ovis aries	31.31	9.00e-38	150.00
IUUC-Ptr-091087	Pan troglodytes	29.67	3.00e-37	149.00
IUUC-Pan-091709	Papio anubis	30.56	2.00e-38	152.00
IUUC-Psi-093265	Pelodiscus sinensis	29.40	1.00e-37	149.00
IUUC-Ppa-095365	Physcomitrella patens	56.86	2.00e-134	471.00
IUUC-Pfo-097494	Poecilia formosa	33.85	2.00e-44	172.00
IUUC-Pab-098362	Pongo abelii	30.42	7.00e-38	150.00
IUUC-Pca-101019	Procavia capensis	36.17	3.00e-31	129.00
IUUC-Ppe-102101	Prunus persica	78.44	0.00e+00	705.00
IUUC-Pva-102849	Pteropus vampyrus	31.80	1.00e-37	150.00
IUUC-Rno-105511	Rattus norvegicus	30.53	4.00e-36	145.00
IUUC-Sha-107265	Sarcophilus harrisii	30.17	9.00e-36	144.00
IUUC-Smo-108866	Selaginella moellendorffii	59.61	2.00e-124	438.00
IUUC-Sit-110806	Setaria italica	64.14	1.00e-153	535.00
IUUC-Sly-110994	Solanum lycopersicum	71.30	0.00e+00	640.00
IUUC-Stu-112493	Solanum tuberosum	78.60	8.00e-130	455.00
IUUC-Sar-113628	Sorex araneus	33.22	5.00e-38	151.00
IUUC-Sbi-114397	Sorghum bicolor	62.21	5.00e-152	530.00
IUUC-Ssc-116418	Sus scrofa	30.83	4.00e-40	158.00
IUUC-Tgu-117054	Taeniopygia guttata	33.02	5.00e-39	154.00
IUUC-Tru-118504	Takifugu rubripes	32.01	5.00e-45	174.00
IUUC-Tni-120254	Tetraodon nigroviridis	33.24	4.00e-44	171.00
IUUC-Tca-121085	Theobroma cacao	77.70	0.00e+00	675.00
IUUC-Tae-124791	Triticum aestivum	65.05	3.00e-147	514.00
IUUC-Tur-126756	Triticum urartu	61.20	3.00e-127	447.00
IUUC-Tbe-127903	Tupaia belangeri	31.19	3.00e-36	145.00
IUUC-Ttr-129118	Tursiops truncatus	31.05	2.00e-41	162.00
IUUC-Vvi-131125	Vitis vinifera	75.00	0.00e+00	666.00
IUUC-Xtr-132287	Xenopus tropicalis	32.42	8.00e-39	154.00
IUUC-Xma-134246	Xiphophorus maculatus	33.85	2.00e-43	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence