iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005586

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348713

Gene Name

MAC3A; ARALYDRAFT_887618

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_100412.1	scaffold_100412.1	scaffold_100412.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-25	87.1	262	292
E3 activity/RING/U-box	2.20e-17	63.5	2	68
UBD/Beta-Prp	1.10e-44	153.5	226	438

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +vt+++f  d +l++++s D+t+++W 
   Q: 262  GHSKKVTSIKFvGDtDLVLTASSDKTVRIWG 292
           8***********6669**************6 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e+++dPvv++ sG  y+++ Ie++++++gk cPvt++p t +d+vP +t + +  + +++ s
   Q: 2    NCAISGEVPEDPVVSKkSGLLYEKRLIERHISDYGK-CPVTGEPHTLDDIVPIKTGKIVKPKPLHTAS 68
           7***********************************.*************************999877 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsf 102
            ++++  +k+++atg+ d t  ++d  +g+ l++l gh+++vt++kf  d+++ +t+s+D+t+++w  s   +++c htlk h+++v+++++
   Q: 226  FSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGSSedgNYTCRHTLKDHSAEVRAVTV 317
           557778899*********************************************************5555789******************* PP
   S: 103  spsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngk 193
           +++++++vs+s d+t   +dl++g cl + t++ ++   + +++hpdg +l +G++ ++v++Wd+k++  + ++ g ht+ ++s+sf++ng 
   Q: 318  HATNKYFVSASLDSTWCFYDLSSGLCLAQvTDASENVDYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGG-HTGEITSISFSENGY 408
           ****************************999999999*************************************88.**************9 PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdn 224
           +l+++++dg v+lwdl++ +  rt++  ++n
   Q: 409  FLATAAQDG-VRLWDLRKLKNFRTFEFPDAN 438
           999999998.9******99999998876654 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNCAISGEVP EDPVVSKKSG LLYEKRLIER HISDYGKCPV TGEPHTLDDI VPIKTGKIVK 60
PKPLHTASIP GLLGTFQTEW DSLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTCTTC TTCGTTTATA CTTCGAAGAT GAATTGTGCA AGTAAGGCAC TTTTTCTTCT 60
TTATTTGCCG ATTTAGGGTT TTATTTTTGC TTTGTTTCTG TTCTTAACAC TGTGGTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0042742--P:defense response to bacterium
GO:0046686--P:response to cadmium ion

KEGG

aly:ARALYDRAFT_887618

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	65.58	0.00e+00	710.00
IUUC-Aml-001230	Ailuropoda melanoleuca	43.16	3.00e-108	384.00
IUUC-Atr-002594	Amborella trichopoda	69.17	0.00e+00	759.00
IUUC-Apl-003686	Anas platyrhynchos	41.78	3.00e-82	298.00
IUUC-Aca-005272	Anolis carolinensis	43.74	2.00e-112	398.00
IUUC-Ath-007693	Arabidopsis thaliana	96.75	0.00e+00	1041.00
IUUC-Afu-008957	Aspergillus fumigatus	34.26	6.00e-69	254.00
IUUC-Ame-011561	Astyanax mexicanus	41.00	7.00e-41	160.00
IUUC-Bgr-012283	Blumeria graminis	31.22	1.00e-50	193.00
IUUC-Bta-013242	Bos taurus	43.91	4.00e-114	404.00
IUUC-Bci-013901	Botrytis cinerea	34.68	1.00e-67	249.00
IUUC-Bdi-014277	Brachypodium distachyon	72.24	0.00e+00	791.00
IUUC-Bol-016045	Brassica oleracea	92.15	0.00e+00	1006.00
IUUC-Bra-017902	Brassica rapa	92.34	0.00e+00	1010.00
IUUC-Cel-018271	Caenorhabditis elegans	38.37	8.00e-100	356.00
IUUC-Cja-019879	Callithrix jacchus	44.32	2.00e-113	402.00
IUUC-Cfa-020175	Canis familiaris	43.71	4.00e-114	404.00
IUUC-Cpo-022379	Cavia porcellus	43.71	8.00e-114	403.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	44.87	3.00e-124	437.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.10	2.00e-114	405.00
IUUC-Cho-025065	Choloepus hoffmanni	36.48	6.00e-45	173.00
IUUC-Cin-025699	Ciona intestinalis	45.11	9.00e-104	369.00
IUUC-Csv-026128	Ciona savignyi	42.75	6.00e-114	404.00
IUUC-Cne-026860	Cryptococcus neoformans	37.36	7.00e-94	337.00
IUUC-Dre-028187	Danio rerio	42.17	8.00e-109	386.00
IUUC-Dno-029453	Dasypus novemcinctus	44.10	2.00e-114	405.00
IUUC-Dor-030150	Dipodomys ordii	42.17	5.00e-41	161.00
IUUC-Dme-031906	Drosophila melanogaster	44.79	1.00e-110	392.00
IUUC-Ete-033035	Echinops telfairi	44.30	7.00e-55	207.00
IUUC-Eca-033478	Equus caballus	43.91	7.00e-114	403.00
IUUC-Eeu-034974	Erinaceus europaeus	44.08	9.00e-75	273.00
IUUC-Fca-036194	Felis catus	43.50	1.00e-112	399.00
IUUC-Fal-037417	Ficedula albicollis	44.32	8.00e-114	403.00
IUUC-Fox-037922	Fusarium oxysporum	31.38	8.00e-62	230.00
IUUC-Fso-038256	Fusarium solani	32.30	5.00e-65	241.00
IUUC-Gmo-038713	Gadus morhua	43.30	3.00e-112	398.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.27	6.00e-55	207.00
IUUC-Gga-041143	Gallus gallus	44.49	7.00e-115	406.00
IUUC-Gac-042129	Gasterosteus aculeatus	43.69	6.00e-112	397.00
IUUC-Gma-043635	Glycine max	75.62	0.00e+00	831.00
IUUC-Ggo-045262	Gorilla gorilla	44.10	2.00e-114	405.00
IUUC-Hsa-046036	Homo sapiens	44.10	2.00e-114	405.00
IUUC-Hvu-047442	Hordeum vulgare	71.79	2.00e-134	470.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.10	1.00e-112	399.00
IUUC-Lch-050105	Latimeria chalumnae	44.02	1.00e-112	399.00
IUUC-Lpe-050976	Leersia perrieri	71.84	0.00e+00	776.00
IUUC-Loc-052042	Lepisosteus oculatus	38.62	2.00e-76	279.00
IUUC-Laf-053451	Loxodonta africana	42.70	3.00e-111	395.00
IUUC-Mcc-055786	Macaca mulatta	44.10	2.00e-114	405.00
IUUC-Meu-056161	Macropus eugenii	43.78	5.00e-51	194.00
IUUC-Mor-057215	Magnaporthe oryzae	31.80	8.00e-56	210.00
IUUC-Mpo-057419	Magnaporthe poae	32.00	2.00e-51	196.00
IUUC-Mtr-057756	Medicago truncatula	73.59	0.00e+00	800.00
IUUC-Mla-059085	Melampsora laricipopulina	36.07	2.00e-79	288.00
IUUC-Mga-060158	Meleagris gallopavo	43.12	1.00e-99	356.00
IUUC-Mvi-060441	Microbotryum violaceum	35.80	3.00e-75	275.00
IUUC-Mmr-061085	Microcebus murinus	44.10	2.00e-114	405.00
IUUC-Mdo-061804	Monodelphis domestica	44.10	2.00e-114	405.00
IUUC-Mmu-063608	Mus musculus	42.16	2.00e-110	391.00
IUUC-Mac-064972	Musa acuminata	71.92	0.00e+00	785.00
IUUC-Mpu-065700	Mustela putorius furo	43.71	5.00e-114	404.00
IUUC-Mlu-068223	Myotis lucifugus	42.48	3.00e-110	391.00
IUUC-Nfi-068504	Neosartorya fischeri	35.55	2.00e-70	259.00
IUUC-Ncr-068729	Neurospora crassa	32.22	2.00e-60	225.00
IUUC-Nle-069754	Nomascus leucogenys	44.10	2.00e-114	405.00
IUUC-Opr-070621	Ochotona princeps	44.54	3.00e-107	381.00
IUUC-Ont-071377	Oreochromis niloticus	43.30	1.00e-110	392.00
IUUC-Oan-073498	Ornithorhynchus anatinus	33.04	2.00e-36	145.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.38	7.00e-111	393.00
IUUC-Oba-075509	Oryza barthii	71.29	0.00e+00	784.00
IUUC-Obr-076480	Oryza brachyantha	72.97	0.00e+00	791.00
IUUC-Ogl-077052	Oryza glaberrima	71.29	0.00e+00	785.00
IUUC-Ogu-078919	Oryza glumaepatula	71.48	0.00e+00	785.00
IUUC-Oin-079357	Oryza indica	67.68	0.00e+00	726.00
IUUC-Olo-080376	Oryza longistaminata	70.99	0.00e+00	729.00
IUUC-Ome-081973	Oryza meridionalis	70.99	0.00e+00	730.00
IUUC-Oni-082849	Oryza nivara	71.10	0.00e+00	781.00
IUUC-Opu-083243	Oryza punctata	72.05	0.00e+00	790.00
IUUC-Oru-084613	Oryza rufipogon	71.29	0.00e+00	783.00
IUUC-Osa-085407	Oryza sativa	71.10	0.00e+00	781.00
IUUC-Ola-086566	Oryzias latipes	42.86	2.00e-109	389.00
IUUC-Oga-089010	Otolemur garnettii	42.83	2.00e-108	385.00
IUUC-Oar-089638	Ovis aries	43.91	4.00e-114	404.00
IUUC-Ptr-091141	Pan troglodytes	44.10	2.00e-114	405.00
IUUC-Pan-092662	Papio anubis	44.10	2.00e-114	405.00
IUUC-Psi-093777	Pelodiscus sinensis	43.81	5.00e-90	323.00
IUUC-Ppa-095924	Physcomitrella patens	67.50	0.00e+00	721.00
IUUC-Pfo-096390	Poecilia formosa	43.30	2.00e-111	395.00
IUUC-Pab-098250	Pongo abelii	44.40	5.00e-110	390.00
IUUC-Pop-099854	Populus trichocarpa	76.11	0.00e+00	835.00
IUUC-Pca-100553	Procavia capensis	43.91	3.00e-112	397.00
IUUC-Ppe-101383	Prunus persica	72.64	0.00e+00	769.00
IUUC-Pva-102189	Pteropus vampyrus	43.91	3.00e-114	404.00
IUUC-Pgr-103304	Puccinia graminis	35.62	6.00e-79	287.00
IUUC-Ptt-103984	Puccinia triticina	35.44	5.00e-81	294.00
IUUC-Rno-105581	Rattus norvegicus	43.71	7.00e-114	403.00
IUUC-Sha-107071	Sarcophilus harrisii	42.30	2.00e-110	392.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.11	3.00e-46	178.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	33.27	6.00e-63	234.00
IUUC-Smo-109648	Selaginella moellendorffii	65.05	0.00e+00	700.00
IUUC-Sit-109873	Setaria italica	72.41	0.00e+00	781.00
IUUC-Sly-111673	Solanum lycopersicum	75.82	0.00e+00	813.00
IUUC-Stu-112125	Solanum tuberosum	76.15	0.00e+00	815.00
IUUC-Sbi-114696	Sorghum bicolor	66.92	0.00e+00	689.00
IUUC-Sre-115134	Sporisorium reilianum	33.69	4.00e-78	285.00
IUUC-Ssc-116260	Sus scrofa	43.91	3.00e-114	404.00
IUUC-Tgu-116533	Taeniopygia guttata	44.51	2.00e-114	405.00
IUUC-Tru-117800	Takifugu rubripes	43.24	3.00e-111	394.00
IUUC-Tsy-118980	Tarsius syrichta	42.01	2.00e-100	358.00
IUUC-Tni-120334	Tetraodon nigroviridis	41.67	1.00e-73	269.00
IUUC-Tca-121807	Theobroma cacao	75.53	0.00e+00	835.00
IUUC-Tre-121920	Trichoderma reesei	32.57	6.00e-62	230.00
IUUC-Tvi-122294	Trichoderma virens	32.40	9.00e-53	200.00
IUUC-Tae-125713	Triticum aestivum	71.29	0.00e+00	787.00
IUUC-Tur-126664	Triticum urartu	61.74	0.00e+00	717.00
IUUC-Tbe-127582	Tupaia belangeri	44.38	1.00e-75	276.00
IUUC-Ttr-128313	Tursiops truncatus	43.91	8.00e-113	399.00
IUUC-Vda-129699	Verticillium dahliae	31.36	2.00e-57	216.00
IUUC-Vpa-130593	Vicugna pacos	45.04	2.00e-106	378.00
IUUC-Vvi-131668	Vitis vinifera	76.91	0.00e+00	849.00
IUUC-Xtr-132186	Xenopus tropicalis	44.44	1.00e-100	359.00
IUUC-Xma-133212	Xiphophorus maculatus	43.82	8.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence