iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-107128

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01193355

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000016006.1	ENSSHAT00000019012.1	ENSSHAP00000018857.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-40	134.3	224	259
UBD/Beta-Prp	1.80e-53	181.8	134	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++++++++f ++   +++GsdD t++++Dlr + 
   Q: 224  GHESDINAICFfPNgEAICTGSDDATCRLFDLRADQ 259
           8*********9977799***************9876 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
           k+ r+l  h++  ++++f +d   +vt+s D t  +wd++tg++ +++ gh+ + +sl++sp+ + ++sG  d  +++wd+++g+c + 
   Q: 134  KVSRELNAHTGYLSCCRFLDDN-NIVTSSGDTTCALWDIETGQQKMVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQ- 220
           567899***************7.7****************************************************************. PP
   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           t++gh++ +n +++ p+g  + +Gs+D t+rl+dl+ ++ l t   +      ++s++f+++g+ l++g +d   ++wd  +ge v tl
   Q: 221  TFTGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQELITYshE-SIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKGERVGTL 308
           **************************************999999533.366789*********************************** PP
   S: 219  nghtdnvksvrfspnderlvsgssDgsiriWd 250
            gh++ v+++ ++ ++  +++gs D  +++W+
   Q: 309  SGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
           *******************************8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKTQIAD ARKAYADTTL AELTSGLEVV GRIQMRTRRT LRGHLAKIYA 60
MHWSTDSKLL VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGAGA TGGAGCAATT GCGTCAGGAA GCTGAACAGC TCAAGACACA GATTGCGGTA 60
ATCTCTCATG CTAGAGATCC CCATACCTGT GGATTCTTCT TAACCCTGTG AATCCTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

KEGG

shr:100914745

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002370	Ailuropoda melanoleuca	94.71	0.00e+00	670.00
IUUC-Atr-002610	Amborella trichopoda	48.71	5.00e-85	307.00
IUUC-Apl-004079	Anas platyrhynchos	94.12	0.00e+00	674.00
IUUC-Aca-004539	Anolis carolinensis	90.88	0.00e+00	653.00
IUUC-Ath-006617	Arabidopsis thaliana	50.97	2.00e-83	302.00
IUUC-Bta-012810	Bos taurus	94.71	0.00e+00	673.00
IUUC-Bdi-014785	Brachypodium distachyon	49.36	2.00e-85	308.00
IUUC-Cja-019894	Callithrix jacchus	94.71	0.00e+00	672.00
IUUC-Cfa-020140	Canis familiaris	95.29	0.00e+00	674.00
IUUC-Cpo-021908	Cavia porcellus	94.71	0.00e+00	672.00
IUUC-Csa-023321	Chlorocebus sabaeus	93.82	0.00e+00	668.00
IUUC-Dno-029783	Dasypus novemcinctus	92.93	1.00e-177	615.00
IUUC-Ete-032435	Echinops telfairi	87.35	2.00e-174	604.00
IUUC-Eca-034169	Equus caballus	95.00	0.00e+00	674.00
IUUC-Eeu-034631	Erinaceus europaeus	87.66	4.00e-160	556.00
IUUC-Fca-035392	Felis catus	95.59	0.00e+00	678.00
IUUC-Fal-036902	Ficedula albicollis	92.35	0.00e+00	665.00
IUUC-Gga-040655	Gallus gallus	92.96	0.00e+00	660.00
IUUC-Ggo-045346	Gorilla gorilla	93.82	0.00e+00	668.00
IUUC-Hsa-046203	Homo sapiens	93.82	0.00e+00	668.00
IUUC-Hvu-047596	Hordeum vulgare	49.36	3.00e-84	305.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	94.12	0.00e+00	671.00
IUUC-Lpe-051040	Leersia perrieri	49.04	1.00e-85	309.00
IUUC-Loc-052327	Lepisosteus oculatus	87.94	0.00e+00	639.00
IUUC-Lma-052985	Leptosphaeria maculans	65.19	4.00e-136	477.00
IUUC-Laf-053616	Loxodonta africana	93.24	0.00e+00	665.00
IUUC-Mcc-055798	Macaca mulatta	93.82	0.00e+00	668.00
IUUC-Mga-059516	Meleagris gallopavo	94.12	0.00e+00	673.00
IUUC-Mmr-061701	Microcebus murinus	95.29	0.00e+00	676.00
IUUC-Mdo-061879	Monodelphis domestica	97.06	0.00e+00	688.00
IUUC-Mmu-063132	Mus musculus	94.12	0.00e+00	667.00
IUUC-Mac-064871	Musa acuminata	45.10	9.00e-83	300.00
IUUC-Mpu-066365	Mustela putorius furo	95.00	0.00e+00	674.00
IUUC-Mlu-067628	Myotis lucifugus	94.41	0.00e+00	672.00
IUUC-Nle-069015	Nomascus leucogenys	92.35	0.00e+00	652.00
IUUC-Opr-070261	Ochotona princeps	94.71	0.00e+00	672.00
IUUC-Ocu-074255	Oryctolagus cuniculus	94.71	0.00e+00	671.00
IUUC-Oga-088685	Otolemur garnettii	94.71	0.00e+00	671.00
IUUC-Oar-089373	Ovis aries	91.79	0.00e+00	639.00
IUUC-Ptr-090627	Pan troglodytes	91.18	0.00e+00	649.00
IUUC-Pan-092347	Papio anubis	93.81	0.00e+00	667.00
IUUC-Psi-092965	Pelodiscus sinensis	94.12	0.00e+00	674.00
IUUC-Pno-095135	Phaeosphaeria nodorum	65.19	3.00e-136	478.00
IUUC-Ppa-095726	Physcomitrella patens	45.30	3.00e-75	275.00
IUUC-Pab-098335	Pongo abelii	93.82	0.00e+00	667.00
IUUC-Pop-099370	Populus trichocarpa	49.03	8.00e-86	310.00
IUUC-Pva-102666	Pteropus vampyrus	95.00	0.00e+00	676.00
IUUC-Pte-104053	Pyrenophora teres	65.19	2.00e-136	478.00
IUUC-Rno-105834	Rattus norvegicus	94.41	0.00e+00	637.00
IUUC-Spo-108352	Schizosaccharomyces pombe	42.67	5.00e-69	254.00
IUUC-Smo-108835	Selaginella moellendorffii	44.44	5.00e-74	271.00
IUUC-Ssc-115886	Sus scrofa	95.59	0.00e+00	677.00
IUUC-Tgu-116461	Taeniopygia guttata	92.65	0.00e+00	667.00
IUUC-Tca-121224	Theobroma cacao	49.35	1.00e-85	310.00
IUUC-Tae-124407	Triticum aestivum	49.68	1.00e-84	306.00
IUUC-Tur-126755	Triticum urartu	49.84	3.00e-85	310.00
IUUC-Tbe-127694	Tupaia belangeri	79.12	8.00e-146	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence