iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006245

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_893849

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_200923.1	scaffold_200923.1	scaffold_200923.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-17	63.3	82	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf........sdtllvsGsdDgtikvWDlrtgvllks 38
           H++s+t+l+f        + + l+s++ Dg++ ++D++ +vllks
   Q: 82   HAASITALSFytpsslsfP-RNLISAAADGSVAIFDTDPFVLLKS 125
           999******9997665433.449*************998888875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSIIAGSYER FIWGFRLKPT KHDADNQTLT LSPLFSYPSH ISPITTVACS GPAAASGGSD 60
DTIHLYDLPS ASSLGSLLDH NHAASITALS FYTPSSLSFP RNLISAAADG SVAIFDTDPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACCTCTC ATCGAAGCTA CAATGAGTAT CATCGCAGGC TCCTACGAGA GATTCATTTG 60
GGGTTTCAGG CTTAAACCCA CAAAGCACGA CGCCGATAAC CAAACCCTAA CTCTCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus

KEGG

aly:ARALYDRAFT_893849

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000839	Aegilops tauschii	54.81	1.00e-32	130.00
IUUC-Aml-001803	Ailuropoda melanoleuca	32.40	5.00e-42	164.00
IUUC-Atr-003018	Amborella trichopoda	46.93	2.00e-86	312.00
IUUC-Apl-004199	Anas platyrhynchos	35.76	7.00e-43	166.00
IUUC-Aca-005157	Anolis carolinensis	32.30	5.00e-38	150.00
IUUC-Ath-007309	Arabidopsis thaliana	96.23	0.00e+00	660.00
IUUC-Ago-007878	Ashbya gossypii	26.30	2.00e-20	92.40
IUUC-Acl-008015	Aspergillus clavatus	24.60	3.00e-14	72.80
IUUC-Afl-008460	Aspergillus flavus	23.08	2.00e-08	53.50
IUUC-Afu-008760	Aspergillus fumigatus	23.37	1.00e-11	64.30
IUUC-Ani-009358	Aspergillus nidulans	22.95	5.00e-13	68.60
IUUC-Aor-010146	Aspergillus oryzae	23.08	2.00e-08	53.50
IUUC-Ame-011121	Astyanax mexicanus	32.23	1.00e-44	173.00
IUUC-Bgr-012152	Blumeria graminis	23.80	2.00e-09	55.80
IUUC-Bta-012383	Bos taurus	31.56	1.00e-41	163.00
IUUC-Bci-013752	Botrytis cinerea	26.02	1.00e-14	73.90
IUUC-Bdi-014505	Brachypodium distachyon	45.12	3.00e-63	234.00
IUUC-Bol-015458	Brassica oleracea	91.76	0.00e+00	625.00
IUUC-Bra-017790	Brassica rapa	91.18	1.00e-179	621.00
IUUC-Cja-018803	Callithrix jacchus	32.98	1.00e-36	146.00
IUUC-Cfa-020178	Canis familiaris	33.64	1.00e-43	169.00
IUUC-Cpo-021785	Cavia porcellus	33.65	2.00e-44	172.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	35.42	4.00e-43	169.00
IUUC-Csa-023179	Chlorocebus sabaeus	33.33	6.00e-45	174.00
IUUC-Cho-025088	Choloepus hoffmanni	34.62	4.00e-30	124.00
IUUC-Csv-025887	Ciona savignyi	27.86	3.00e-28	118.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	24.24	7.00e-15	74.70
IUUC-Cne-027021	Cryptococcus neoformans	33.67	1.00e-23	105.00
IUUC-Dre-027360	Danio rerio	30.60	2.00e-44	172.00
IUUC-Dno-029836	Dasypus novemcinctus	32.20	1.00e-45	176.00
IUUC-Dor-030677	Dipodomys ordii	31.54	1.00e-35	142.00
IUUC-Dme-032004	Drosophila melanogaster	28.12	2.00e-22	99.80
IUUC-Ete-032837	Echinops telfairi	29.35	3.00e-35	141.00
IUUC-Eca-033291	Equus caballus	33.12	3.00e-43	168.00
IUUC-Eeu-035347	Erinaceus europaeus	31.42	2.00e-35	142.00
IUUC-Fca-036577	Felis catus	31.78	2.00e-42	165.00
IUUC-Fal-036810	Ficedula albicollis	31.50	3.00e-40	158.00
IUUC-Fso-038338	Fusarium solani	24.71	2.00e-12	66.20
IUUC-Gmo-038537	Gadus morhua	31.47	3.00e-35	141.00
IUUC-Gga-040566	Gallus gallus	34.17	1.00e-44	173.00
IUUC-Gac-042422	Gasterosteus aculeatus	32.40	2.00e-40	158.00
IUUC-Gma-044199	Glycine max	60.70	8.00e-110	389.00
IUUC-Ggo-045365	Gorilla gorilla	28.27	1.00e-27	116.00
IUUC-Hsa-046121	Homo sapiens	33.75	5.00e-44	171.00
IUUC-Hvu-047592	Hordeum vulgare	51.76	6.00e-40	155.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	33.10	3.00e-38	151.00
IUUC-Kpa-049407	Komagataella pastoris	29.22	3.00e-28	118.00
IUUC-Lch-049767	Latimeria chalumnae	31.01	2.00e-42	166.00
IUUC-Lpe-051569	Leersia perrieri	51.80	2.00e-63	234.00
IUUC-Loc-051940	Lepisosteus oculatus	30.15	3.00e-38	151.00
IUUC-Lma-053288	Leptosphaeria maculans	24.14	7.00e-12	64.70
IUUC-Laf-054463	Loxodonta africana	32.19	2.00e-40	159.00
IUUC-Mcc-055412	Macaca mulatta	33.02	2.00e-44	172.00
IUUC-Mor-056986	Magnaporthe oryzae	26.99	4.00e-09	55.50
IUUC-Mtr-057886	Medicago truncatula	63.82	5.00e-111	393.00
IUUC-Mla-058862	Melampsora laricipopulina	24.38	9.00e-11	60.80
IUUC-Mga-060109	Meleagris gallopavo	34.13	1.00e-40	159.00
IUUC-Mvi-060326	Microbotryum violaceum	25.00	4.00e-26	112.00
IUUC-Mmr-060681	Microcebus murinus	32.70	4.00e-43	168.00
IUUC-Mdo-063004	Monodelphis domestica	31.25	6.00e-40	157.00
IUUC-Mmu-064184	Mus musculus	31.76	6.00e-40	157.00
IUUC-Mac-064987	Musa acuminata	58.64	7.00e-98	349.00
IUUC-Mpu-065847	Mustela putorius furo	30.77	2.00e-42	166.00
IUUC-Mlu-067608	Myotis lucifugus	32.92	1.00e-42	166.00
IUUC-Nfi-068531	Neosartorya fischeri	24.88	4.00e-13	68.90
IUUC-Ncr-068937	Neurospora crassa	26.02	2.00e-07	50.10
IUUC-Nle-069302	Nomascus leucogenys	33.44	2.00e-43	169.00
IUUC-Ont-072591	Oreochromis niloticus	30.50	1.00e-35	142.00
IUUC-Oan-073558	Ornithorhynchus anatinus	32.10	6.00e-30	124.00
IUUC-Ocu-074558	Oryctolagus cuniculus	31.07	1.00e-38	152.00
IUUC-Obr-076509	Oryza brachyantha	54.81	1.00e-34	137.00
IUUC-Ogl-076960	Oryza glaberrima	49.10	2.00e-64	238.00
IUUC-Ogu-078660	Oryza glumaepatula	47.73	4.00e-58	218.00
IUUC-Oin-079790	Oryza indica	51.82	4.00e-74	270.00
IUUC-Ome-081631	Oryza meridionalis	47.14	2.00e-46	179.00
IUUC-Oni-083082	Oryza nivara	50.00	1.00e-65	242.00
IUUC-Opu-083394	Oryza punctata	50.90	1.00e-73	269.00
IUUC-Oru-084461	Oryza rufipogon	49.11	5.00e-66	243.00
IUUC-Osa-085655	Oryza sativa	50.19	8.00e-60	222.00
IUUC-Ola-086955	Oryzias latipes	33.33	1.00e-45	176.00
IUUC-Olu-087657	Ostreococcus lucimarinus	30.61	4.00e-27	115.00
IUUC-Oga-088108	Otolemur garnettii	33.75	2.00e-44	172.00
IUUC-Oar-090019	Ovis aries	31.88	1.00e-42	166.00
IUUC-Ptr-091544	Pan troglodytes	33.75	4.00e-44	171.00
IUUC-Pan-092562	Papio anubis	33.02	2.00e-44	172.00
IUUC-Psi-094025	Pelodiscus sinensis	36.89	8.00e-28	117.00
IUUC-Pma-094322	Petromyzon marinus	31.25	4.00e-34	137.00
IUUC-Pno-095112	Phaeosphaeria nodorum	23.87	2.00e-09	56.60
IUUC-Ppa-095541	Physcomitrella patens	38.87	2.00e-57	215.00
IUUC-Pfo-096667	Poecilia formosa	31.45	1.00e-29	123.00
IUUC-Pab-098064	Pongo abelii	33.02	8.00e-44	170.00
IUUC-Pop-099969	Populus trichocarpa	70.91	2.00e-124	437.00
IUUC-Pca-101053	Procavia capensis	32.39	8.00e-40	156.00
IUUC-Ppe-101839	Prunus persica	67.25	3.00e-128	450.00
IUUC-Pva-102963	Pteropus vampyrus	33.44	2.00e-40	159.00
IUUC-Pgr-103276	Puccinia graminis	25.48	7.00e-12	64.70
IUUC-Pte-104117	Pyrenophora teres	24.39	1.00e-08	54.30
IUUC-Pyt-104649	Pyrenophora triticirepentis	24.92	7.00e-10	58.20
IUUC-Rno-105975	Rattus norvegicus	32.92	1.00e-37	149.00
IUUC-Sce-106226	Saccharomyces cerevisiae	25.85	6.00e-18	84.70
IUUC-Sha-106907	Sarcophilus harrisii	30.41	9.00e-40	156.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	24.41	1.00e-14	73.20
IUUC-Spo-108377	Schizosaccharomyces pombe	25.07	7.00e-18	84.00
IUUC-Smo-109068	Selaginella moellendorffii	39.88	3.00e-60	224.00
IUUC-Sit-110114	Setaria italica	47.43	7.00e-67	246.00
IUUC-Sly-111581	Solanum lycopersicum	63.29	5.00e-113	400.00
IUUC-Stu-112770	Solanum tuberosum	63.29	1.00e-113	402.00
IUUC-Sbi-114797	Sorghum bicolor	47.34	3.00e-62	231.00
IUUC-Sre-114941	Sporisorium reilianum	28.27	1.00e-30	127.00
IUUC-Ssc-116346	Sus scrofa	31.88	5.00e-43	167.00
IUUC-Tgu-116628	Taeniopygia guttata	34.28	3.00e-43	168.00
IUUC-Tru-117646	Takifugu rubripes	33.33	4.00e-40	157.00
IUUC-Tsy-119593	Tarsius syrichta	30.93	7.00e-23	100.00
IUUC-Tni-119872	Tetraodon nigroviridis	32.28	8.00e-44	169.00
IUUC-Tca-121500	Theobroma cacao	70.76	2.00e-132	464.00
IUUC-Tre-122151	Trichoderma reesei	29.68	1.00e-12	67.00
IUUC-Tae-125015	Triticum aestivum	48.48	1.00e-68	252.00
IUUC-Tur-126015	Triticum urartu	52.86	8.00e-33	131.00
IUUC-Tbe-127959	Tupaia belangeri	31.34	7.00e-35	140.00
IUUC-Ttr-129125	Tursiops truncatus	33.12	1.00e-42	166.00
IUUC-Uma-129567	Ustilago maydis	32.30	1.00e-29	124.00
IUUC-Vpa-130157	Vicugna pacos	37.13	3.00e-27	114.00
IUUC-Vvi-131065	Vitis vinifera	67.26	2.00e-109	387.00
IUUC-Xtr-132601	Xenopus tropicalis	30.31	2.00e-33	135.00
IUUC-Xma-133142	Xiphophorus maculatus	31.35	5.00e-36	144.00
IUUC-Yli-134580	Yarrowia lipolytica	27.19	9.00e-18	84.00
IUUC-Zma-135330	Zea mays	51.80	6.00e-78	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence