iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000012354.7	ENSRNOT00000016649.6	ENSRNOP00000016647.4
ENSRNOG00000012354.7	ENSRNOT00000016596.6	ENSRNOP00000016597.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	97.74	0.00e+00	1156.00	IUUC-Hsa-045801

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAALAVNKPG AGVDSGRQGS RGTAVVKVLE CGVCEDVFSL QGDKVPRLLL CGHTVCHDCL 60
TRLPLHGRAI RCPFDRQVTD LGDSGVWGLK KNFALLELLE RLQNGHIGQY GAAEEALGIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCACGCG CCGAGGCTTC TGGGTAGGTC GCTCAACCCC TCCTCTCAGT TAAAGGCTCT 60
ACTGCAGCTG TGCCGCTGCT CCTTCCAGGA TGGCTGCCCT CGCTGTAAAC AAGCCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0342--GTP-binding
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR024156--Small_GTPase_ARF
IPR006689--Small_GTPase_ARF/SAR
IPR000315--Znf_B-box
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51417--ARF
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00025--Arf
PF00643--zf-B_box
PF14634--zf-RING_5

PRINTS

PR00328--SAR1GTPBP

SMART

SM00502--BBC
SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001685	Ailuropoda melanoleuca	98.44	0.00e+00	1132.00
IUUC-Apl-003280	Anas platyrhynchos	94.95	0.00e+00	1090.00
IUUC-Aca-004587	Anolis carolinensis	92.04	0.00e+00	1006.00
IUUC-Ame-010760	Astyanax mexicanus	88.89	0.00e+00	1055.00
IUUC-Bta-013139	Bos taurus	96.03	0.00e+00	1106.00
IUUC-Cel-018197	Caenorhabditis elegans	36.53	4.00e-96	345.00
IUUC-Cja-019407	Callithrix jacchus	97.56	0.00e+00	1122.00
IUUC-Cfa-020758	Canis familiaris	97.89	0.00e+00	1116.00
IUUC-Cpo-022050	Cavia porcellus	97.56	0.00e+00	1157.00
IUUC-Csa-023938	Chlorocebus sabaeus	97.74	0.00e+00	1123.00
IUUC-Cho-024793	Choloepus hoffmanni	76.63	0.00e+00	746.00
IUUC-Cin-025424	Ciona intestinalis	56.97	0.00e+00	635.00
IUUC-Csv-025949	Ciona savignyi	56.13	2.00e-180	625.00
IUUC-Dre-028835	Danio rerio	88.70	0.00e+00	1050.00
IUUC-Dno-029080	Dasypus novemcinctus	89.18	0.00e+00	1027.00
IUUC-Dor-031092	Dipodomys ordii	90.94	0.00e+00	1061.00
IUUC-Ete-033169	Echinops telfairi	84.15	0.00e+00	945.00
IUUC-Eca-033509	Equus caballus	98.78	0.00e+00	1137.00
IUUC-Eeu-034669	Erinaceus europaeus	99.12	4.00e-132	464.00
IUUC-Fca-035813	Felis catus	98.61	0.00e+00	1139.00
IUUC-Fal-037222	Ficedula albicollis	92.78	0.00e+00	1098.00
IUUC-Gmo-038996	Gadus morhua	88.26	0.00e+00	1048.00
IUUC-Gga-040181	Gallus gallus	93.94	0.00e+00	1113.00
IUUC-Gac-041763	Gasterosteus aculeatus	87.56	0.00e+00	1039.00
IUUC-Ggo-044808	Gorilla gorilla	91.84	0.00e+00	1058.00
IUUC-Hsa-045801	Homo sapiens	97.74	0.00e+00	1123.00
IUUC-Itr-048568	Ictidomys tridecemlineatus	98.43	0.00e+00	1132.00
IUUC-Lch-049531	Latimeria chalumnae	92.04	0.00e+00	1062.00
IUUC-Loc-052929	Lepisosteus oculatus	89.46	0.00e+00	1062.00
IUUC-Laf-053593	Loxodonta africana	98.43	0.00e+00	1134.00
IUUC-Mcc-055065	Macaca mulatta	97.74	0.00e+00	1123.00
IUUC-Meu-056372	Macropus eugenii	98.67	7.00e-131	460.00
IUUC-Mga-059665	Meleagris gallopavo	95.16	0.00e+00	959.00
IUUC-Mmr-061643	Microcebus murinus	98.43	0.00e+00	1131.00
IUUC-Mdo-062624	Monodelphis domestica	94.02	0.00e+00	1111.00
IUUC-Mmu-064210	Mus musculus	99.30	0.00e+00	1174.00
IUUC-Mpu-066292	Mustela putorius furo	98.73	0.00e+00	1093.00
IUUC-Mlu-066952	Myotis lucifugus	98.26	0.00e+00	1130.00
IUUC-Nle-069002	Nomascus leucogenys	97.74	0.00e+00	1123.00
IUUC-Opr-070405	Ochotona princeps	88.85	0.00e+00	1034.00
IUUC-Ont-071487	Oreochromis niloticus	88.89	0.00e+00	1049.00
IUUC-Oan-073274	Ornithorhynchus anatinus	95.95	0.00e+00	982.00
IUUC-Ocu-074788	Oryctolagus cuniculus	98.26	0.00e+00	1129.00
IUUC-Ola-086339	Oryzias latipes	87.48	0.00e+00	1041.00
IUUC-Oga-089037	Otolemur garnettii	98.26	0.00e+00	1131.00
IUUC-Oar-089458	Ovis aries	98.21	0.00e+00	1107.00
IUUC-Pan-092120	Papio anubis	97.06	0.00e+00	1110.00
IUUC-Psi-093157	Pelodiscus sinensis	92.75	0.00e+00	1104.00
IUUC-Pfo-096904	Poecilia formosa	88.13	0.00e+00	1040.00
IUUC-Pab-098358	Pongo abelii	97.74	0.00e+00	1123.00
IUUC-Pva-102674	Pteropus vampyrus	96.69	0.00e+00	1110.00
IUUC-Sha-106532	Sarcophilus harrisii	86.89	2.00e-61	227.00
IUUC-Sar-113483	Sorex araneus	95.65	6.00e-151	527.00
IUUC-Ssc-116170	Sus scrofa	98.61	0.00e+00	1138.00
IUUC-Tgu-116968	Taeniopygia guttata	93.22	0.00e+00	1092.00
IUUC-Tru-118246	Takifugu rubripes	88.29	0.00e+00	1038.00
IUUC-Tni-120692	Tetraodon nigroviridis	90.16	0.00e+00	1032.00
IUUC-Ttr-128956	Tursiops truncatus	98.43	0.00e+00	1134.00
IUUC-Vpa-130291	Vicugna pacos	91.64	0.00e+00	1068.00
IUUC-Xtr-132331	Xenopus tropicalis	91.48	0.00e+00	917.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence