iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093718

Ensembl Protein ID

ENSPSIP00000014592.1

UniProt Accession

K7G2T1; K7G2T1_PELSI

Genbank Protein ID

ENSPSIP00000014592

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01198677

Gene Name

GNB4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000013084.1	ENSPSIT00000014660.1	ENSPSIP00000014592.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-41	137.6	141	176
UBD/Beta-Prp	2.40e-54	184.5	46	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gHt+  +c++f +d+ +v++s+D t+ +WD+ tg +
   Q: 141  GHTGYLSCCRFlDDNQIVTSSGDTTCALWDIETGQQ 176
           8**********988*****************99976 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ + +d+ +lv++s+D+ + +wd  t   +h++   ++ v+++++ psg++++ G+ d++  +++l+t++    
   Q: 46   RTRRTLRGHLAKIYAMHWGSDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134
           446899*****************************************************************************987776 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               l gh+g  +c ++ + +n +v++s D+t+ lWd++tg+  +t+tg ht++v sls++++++ +vsg++d + klwd++ g c ++
   Q: 135  vsrELPGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQS 221
           6779*************99.78899***********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           ++gh + ++ v f+pn++ +++gs+D + r++dlr ++ l ++++ n
   Q: 222  FTGHVSDINAVCFFPNGHAFATGSDDATCRLFDLRADQELMMYSHDN 268
           **************************************999998854 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSELEQLRQE AEQLRNQIRD ARKACSDTTL AQITTSLDSV GRIQMRTRRT LRGHLAKIYA 60
MHWGSDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV MTCAYAPSGN YVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTTCAC TAGAATTACT CCCAATTTAT ACTAGTGTAA GTCTGAAAAT ATGTAAGCTG 60
TATGTTTGTG GTTTTGGACT ACAATTCCCA GCCTGCTGCA CACTAAGGGT GGGCTGGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005765--C:lysosomal membrane
GO:0043209--C:myelin sheath
GO:0007165--P:signal transduction
GO:0021762--P:substantia nigra development

KEGG

pss:102446907

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001727	Ailuropoda melanoleuca	95.05	3.00e-179	620.00
IUUC-Apl-003923	Anas platyrhynchos	99.69	0.00e+00	629.00
IUUC-Aca-004754	Anolis carolinensis	99.38	0.00e+00	630.00
IUUC-Ame-011005	Astyanax mexicanus	93.19	2.00e-176	610.00
IUUC-Bta-013200	Bos taurus	94.74	3.00e-179	620.00
IUUC-Cel-018704	Caenorhabditis elegans	86.76	4.00e-176	610.00
IUUC-Cja-019845	Callithrix jacchus	94.74	6.00e-179	619.00
IUUC-Cfa-020395	Canis familiaris	95.05	3.00e-179	620.00
IUUC-Cpo-021376	Cavia porcellus	94.12	1.00e-178	618.00
IUUC-Csa-023295	Chlorocebus sabaeus	95.05	3.00e-179	620.00
IUUC-Cho-024766	Choloepus hoffmanni	94.46	1.00e-179	621.00
IUUC-Dme-031748	Drosophila melanogaster	84.41	2.00e-172	597.00
IUUC-Ete-032710	Echinops telfairi	93.51	9.00e-169	585.00
IUUC-Eca-033628	Equus caballus	94.74	6.00e-179	619.00
IUUC-Eeu-034978	Erinaceus europaeus	94.14	1.00e-146	511.00
IUUC-Fal-037616	Ficedula albicollis	100.00	0.00e+00	633.00
IUUC-Gmo-039556	Gadus morhua	95.98	1.00e-180	625.00
IUUC-Gga-040249	Gallus gallus	100.00	0.00e+00	633.00
IUUC-Gac-041805	Gasterosteus aculeatus	94.74	3.00e-179	620.00
IUUC-Ggo-044954	Gorilla gorilla	94.74	7.00e-179	619.00
IUUC-Hsa-046105	Homo sapiens	95.05	3.00e-179	620.00
IUUC-Itr-048623	Ictidomys tridecemlineatus	95.03	1.00e-178	617.00
IUUC-Mcc-055787	Macaca mulatta	95.05	3.00e-179	620.00
IUUC-Mga-060050	Meleagris gallopavo	99.69	0.00e+00	629.00
IUUC-Mmr-060931	Microcebus murinus	95.05	3.00e-179	620.00
IUUC-Mdo-063055	Monodelphis domestica	97.83	5.00e-180	622.00
IUUC-Mmu-064368	Mus musculus	92.88	3.00e-175	607.00
IUUC-Mpu-066358	Mustela putorius furo	95.05	3.00e-179	620.00
IUUC-Mlu-067328	Myotis lucifugus	94.43	6.00e-178	615.00
IUUC-Nle-069612	Nomascus leucogenys	95.05	3.00e-179	620.00
IUUC-Ont-071287	Oreochromis niloticus	95.05	4.00e-178	616.00
IUUC-Oan-072913	Ornithorhynchus anatinus	99.38	0.00e+00	630.00
IUUC-Ocu-074126	Oryctolagus cuniculus	95.05	4.00e-180	623.00
IUUC-Ola-087297	Oryzias latipes	93.85	8.00e-179	619.00
IUUC-Oar-089360	Ovis aries	94.74	9.00e-179	619.00
IUUC-Ptr-091437	Pan troglodytes	95.05	3.00e-179	620.00
IUUC-Pan-092195	Papio anubis	94.74	6.00e-179	619.00
IUUC-Pfo-096251	Poecilia formosa	94.43	4.00e-178	616.00
IUUC-Sha-106534	Sarcophilus harrisii	97.83	3.00e-180	623.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	36.13	4.00e-57	214.00
IUUC-Sar-113642	Sorex araneus	97.06	2.00e-152	531.00
IUUC-Tgu-117198	Taeniopygia guttata	100.00	0.00e+00	633.00
IUUC-Tru-118399	Takifugu rubripes	95.05	3.00e-179	620.00
IUUC-Tsy-119354	Tarsius syrichta	92.57	2.00e-175	607.00
IUUC-Tbe-128132	Tupaia belangeri	89.06	2.00e-131	460.00
IUUC-Ttr-129243	Tursiops truncatus	95.05	3.00e-179	620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence