iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012361

Ensembl Protein ID

ENSBTAP00000010703.5

UniProt Accession

E1BJZ0; E1BJZ0_BOVIN

Genbank Protein ID

ENSBTAP00000010703

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02004416

Gene Name

IFIH1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000008142.5	ENSBTAT00000010703.5	ENSBTAP00000010703.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	1.70e-44	150.3	112	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 2    deeyrlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktLvqkegWfrefl 73
           ++e ++ll++lq++++++L+v+dvldk+++e ll++e+++++ aae++gn++++++LLk++vqke+Wf++fl
   Q: 112  HDECLQLLNLLQPTLVDKLLVADVLDKCVEEKLLTIEDRNRVSAAENNGNEAGVRELLKRIVQKENWFSTFL 183
           89********************************************************************96 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MSSDGSSTDK NFCYLISCFR ARVKRYIQVE PVLDYLTFLP PEVKEHIQRT AATTGDIQAA 60
DLLLNTLERG NWPLGWARMF VEALRQAGNP LAARYVNPEL TDLPSPSSEN AHDECLQLLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGG ACGGGAGTTC AACAGACAAG AATTTCTGCT ATCTCATCTC GTGTTTCAGG 60
GCCAGAGTGA AAAGGTACAT CCAGGTGGAA CCAGTATTGG ACTACCTGAC TTTTCTACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR
IPR012336--Thioredoxin-like_fold

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0003725--F:double-stranded RNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0043021--F:ribonucleoprotein complex binding
GO:0003727--F:single-stranded RNA binding
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:0039530--P:MDA-5 signaling pathway
GO:0032727--P:positive regulation of interferon-alpha production
GO:0032728--P:positive regulation of interferon-beta production
GO:0016925--P:protein sumoylation

KEGG

bta:535490

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001336	Ailuropoda melanoleuca	80.82	0.00e+00	1575.00
IUUC-Apl-003900	Anas platyrhynchos	59.50	0.00e+00	1142.00
IUUC-Aca-005329	Anolis carolinensis	58.76	0.00e+00	1003.00
IUUC-Ame-011305	Astyanax mexicanus	54.27	0.00e+00	754.00
IUUC-Cja-018760	Callithrix jacchus	81.85	0.00e+00	1518.00
IUUC-Cfa-020321	Canis familiaris	80.86	0.00e+00	1529.00
IUUC-Cpo-022450	Cavia porcellus	77.34	0.00e+00	1502.00
IUUC-Cre-022916	Chlamydomonas reinhardtii	33.06	6.00e-13	70.10
IUUC-Csa-024194	Chlorocebus sabaeus	83.71	0.00e+00	1543.00
IUUC-Cho-024364	Choloepus hoffmanni	72.94	0.00e+00	1012.00
IUUC-Dre-028305	Danio rerio	46.93	0.00e+00	787.00
IUUC-Dno-029831	Dasypus novemcinctus	81.87	0.00e+00	1577.00
IUUC-Dor-030410	Dipodomys ordii	75.46	0.00e+00	1181.00
IUUC-Ete-032950	Echinops telfairi	74.83	9.00e-175	607.00
IUUC-Eca-034279	Equus caballus	84.64	0.00e+00	1610.00
IUUC-Eeu-034678	Erinaceus europaeus	78.30	0.00e+00	1523.00
IUUC-Fca-035618	Felis catus	84.53	0.00e+00	954.00
IUUC-Fal-037106	Ficedula albicollis	68.33	0.00e+00	952.00
IUUC-Gmo-038598	Gadus morhua	49.65	0.00e+00	657.00
IUUC-Gga-040467	Gallus gallus	59.59	0.00e+00	1142.00
IUUC-Gac-042316	Gasterosteus aculeatus	47.32	0.00e+00	801.00
IUUC-Ggo-045461	Gorilla gorilla	82.73	0.00e+00	1522.00
IUUC-Hsa-045771	Homo sapiens	82.63	0.00e+00	1522.00
IUUC-Itr-048762	Ictidomys tridecemlineatus	80.49	0.00e+00	1512.00
IUUC-Lch-049913	Latimeria chalumnae	64.63	0.00e+00	899.00
IUUC-Loc-052768	Lepisosteus oculatus	53.79	0.00e+00	961.00
IUUC-Laf-053933	Loxodonta africana	81.95	0.00e+00	1540.00
IUUC-Mcc-054695	Macaca mulatta	83.80	0.00e+00	1548.00
IUUC-Meu-056829	Macropus eugenii	73.53	0.00e+00	1092.00
IUUC-Mga-059205	Meleagris gallopavo	60.10	0.00e+00	1131.00
IUUC-Mvi-060497	Microbotryum violaceum	34.87	1.00e-17	86.30
IUUC-Mmr-060703	Microcebus murinus	82.24	0.00e+00	1516.00
IUUC-Mdo-063079	Monodelphis domestica	70.76	0.00e+00	1403.00
IUUC-Mmu-064066	Mus musculus	77.08	0.00e+00	1516.00
IUUC-Mpu-066261	Mustela putorius furo	81.56	0.00e+00	1553.00
IUUC-Mlu-068196	Myotis lucifugus	82.31	0.00e+00	1553.00
IUUC-Nfi-068405	Neosartorya fischeri	24.49	2.00e-22	102.00
IUUC-Nle-069479	Nomascus leucogenys	80.16	0.00e+00	1492.00
IUUC-Opr-070717	Ochotona princeps	73.73	0.00e+00	1129.00
IUUC-Ont-071702	Oreochromis niloticus	47.02	0.00e+00	836.00
IUUC-Oan-073639	Ornithorhynchus anatinus	65.44	0.00e+00	1162.00
IUUC-Ocu-074521	Oryctolagus cuniculus	81.02	0.00e+00	1559.00
IUUC-Ogl-077410	Oryza glaberrima	34.21	1.60e+00	27.70
IUUC-Ola-086351	Oryzias latipes	46.08	0.00e+00	806.00
IUUC-Oga-088539	Otolemur garnettii	78.71	0.00e+00	1474.00
IUUC-Oar-090186	Ovis aries	96.09	0.00e+00	1786.00
IUUC-Ptr-090575	Pan troglodytes	79.77	0.00e+00	1483.00
IUUC-Pan-092371	Papio anubis	83.80	0.00e+00	1545.00
IUUC-Psi-093072	Pelodiscus sinensis	62.37	0.00e+00	1206.00
IUUC-Pma-094345	Petromyzon marinus	42.45	6.00e-90	324.00
IUUC-Pfo-096401	Poecilia formosa	51.75	0.00e+00	665.00
IUUC-Pab-097623	Pongo abelii	82.63	0.00e+00	1513.00
IUUC-Pca-100993	Procavia capensis	74.79	0.00e+00	1244.00
IUUC-Pva-102227	Pteropus vampyrus	79.45	0.00e+00	1457.00
IUUC-Rno-105198	Rattus norvegicus	77.52	0.00e+00	1564.00
IUUC-Sha-107622	Sarcophilus harrisii	72.55	0.00e+00	1391.00
IUUC-Sar-113625	Sorex araneus	83.69	1.00e-157	550.00
IUUC-Tgu-117486	Taeniopygia guttata	58.90	0.00e+00	1087.00
IUUC-Tru-118445	Takifugu rubripes	45.59	0.00e+00	824.00
IUUC-Tsy-119512	Tarsius syrichta	79.80	0.00e+00	1443.00
IUUC-Tni-120711	Tetraodon nigroviridis	45.43	0.00e+00	824.00
IUUC-Tbe-127644	Tupaia belangeri	72.27	0.00e+00	1303.00
IUUC-Ttr-128989	Tursiops truncatus	82.99	0.00e+00	1627.00
IUUC-Vpa-130587	Vicugna pacos	79.47	0.00e+00	1268.00
IUUC-Xtr-132127	Xenopus tropicalis	53.12	0.00e+00	1009.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence