iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Eca-034243

Ensembl Protein ID

ENSECAP00000019588.1

UniProt Accession

F6X3S7; F6X3S7_HORSE

Protein Name

Uncharacterized protein

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000021928.1	ENSECAT00000023635.1	ENSECAP00000019588.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-19	69.3	168	205
ULD/UDP/UBQ/UBQ_PIM	1.30e-17	63.6	1	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 168  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 205
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 23   veelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           v++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    VKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 56
           899**************************************************997 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

VKALKEKIES EKGKDAFPVA GQKLIYAGKI LNDDTALKEY KIDEKNFVVV MVTKPKAVTT 60
PAPATTQQSN SATTTTVSSS TAPAAAQAPT PAPALAPAPT PASITPASTT ASSEPAPASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCTTA AAAAAGTAGG TATCAGGTTC CGTCTGCAGG AGAGAGGTGA GCGGTGAGGA 60
GTGGTGGAAT GAATTCTTTG CCCTCTTCTA CCCAGAATTG GGAACCCTTT TATGTGTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	36.14	9.00e-33	134.00
IUUC-Aml-001195	Ailuropoda melanoleuca	96.61	7.00e-89	320.00
IUUC-Atr-003116	Amborella trichopoda	37.20	2.00e-32	132.00
IUUC-Apl-003371	Anas platyrhynchos	85.29	1.00e-92	333.00
IUUC-Aca-004599	Anolis carolinensis	79.58	4.00e-92	331.00
IUUC-Ath-007157	Arabidopsis thaliana	36.95	1.00e-39	157.00
IUUC-Ago-007830	Ashbya gossypii	63.27	4.00e-13	68.90
IUUC-Acl-008212	Aspergillus clavatus	47.01	4.00e-19	89.00
IUUC-Afl-008605	Aspergillus flavus	44.12	2.00e-19	90.10
IUUC-Afu-008877	Aspergillus fumigatus	46.27	1.00e-18	87.40
IUUC-Aor-010032	Aspergillus oryzae	44.12	3.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	40.73	1.00e-30	127.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	1.00e-33	137.00
IUUC-Bta-012922	Bos taurus	95.85	1.00e-123	436.00
IUUC-Bci-013933	Botrytis cinerea	49.25	2.00e-19	90.10
IUUC-Bdi-014253	Brachypodium distachyon	36.14	8.00e-35	140.00
IUUC-Bol-015354	Brassica oleracea	37.45	2.00e-37	149.00
IUUC-Bra-016970	Brassica rapa	39.22	1.00e-40	159.00
IUUC-Cel-018364	Caenorhabditis elegans	36.28	2.00e-19	89.40
IUUC-Cja-018772	Callithrix jacchus	94.32	4.00e-127	447.00
IUUC-Cfa-020683	Canis familiaris	96.60	5.00e-95	340.00
IUUC-Cpo-022145	Cavia porcellus	89.66	2.00e-118	419.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	37.96	5.00e-30	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	95.09	5.00e-135	474.00
IUUC-Cho-024814	Choloepus hoffmanni	72.98	2.00e-79	288.00
IUUC-Cin-025741	Ciona intestinalis	40.55	2.00e-36	146.00
IUUC-Csv-025823	Ciona savignyi	38.28	5.00e-32	130.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	44.90	8.00e-14	71.20
IUUC-Cne-027056	Cryptococcus neoformans	58.70	5.00e-11	62.00
IUUC-Cme-027260	Cyanidioschyzon merolae	27.27	2.00e-20	93.60
IUUC-Dre-028369	Danio rerio	73.25	8.00e-82	297.00
IUUC-Dno-029543	Dasypus novemcinctus	97.74	2.00e-102	365.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Ete-032583	Echinops telfairi	81.70	5.00e-65	241.00
IUUC-Eeu-034721	Erinaceus europaeus	90.05	5.00e-70	257.00
IUUC-Fca-035679	Felis catus	97.74	1.00e-100	359.00
IUUC-Fal-037148	Ficedula albicollis	83.61	4.00e-87	314.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	9.00e-16	77.80
IUUC-Gmo-039080	Gadus morhua	62.92	2.00e-60	226.00
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	5.00e-16	78.60
IUUC-Gga-040544	Gallus gallus	74.48	3.00e-119	421.00
IUUC-Gma-043937	Glycine max	35.06	1.00e-40	160.00
IUUC-Ggo-045125	Gorilla gorilla	98.73	2.00e-95	342.00
IUUC-Hsa-046519	Homo sapiens	98.73	2.00e-95	342.00
IUUC-Hvu-047832	Hordeum vulgare	36.55	6.00e-35	141.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	91.47	6.00e-114	404.00
IUUC-Kpa-049314	Komagataella pastoris	36.67	8.00e-31	127.00
IUUC-Lch-050553	Latimeria chalumnae	68.12	3.00e-94	338.00
IUUC-Lpe-050801	Leersia perrieri	34.69	7.00e-35	141.00
IUUC-Loc-051748	Lepisosteus oculatus	76.17	1.00e-75	276.00
IUUC-Lma-053328	Leptosphaeria maculans	51.92	3.00e-09	52.80
IUUC-Laf-054293	Loxodonta africana	95.09	9.00e-121	426.00
IUUC-Mcc-055600	Macaca mulatta	98.12	2.00e-101	362.00
IUUC-Meu-056082	Macropus eugenii	66.55	4.00e-68	251.00
IUUC-Mor-057287	Magnaporthe oryzae	46.77	9.00e-15	74.70
IUUC-Mpo-057609	Magnaporthe poae	46.51	2.00e-15	76.30
IUUC-Mtr-058148	Medicago truncatula	35.91	7.00e-42	164.00
IUUC-Mla-058961	Melampsora laricipopulina	46.62	3.00e-26	112.00
IUUC-Mga-060060	Meleagris gallopavo	49.02	2.00e-15	76.30
IUUC-Mvi-060220	Microbotryum violaceum	43.61	2.00e-21	97.10
IUUC-Mmr-061159	Microcebus murinus	96.22	5.00e-94	337.00
IUUC-Mdo-061967	Monodelphis domestica	86.86	5.00e-86	311.00
IUUC-Mmu-063258	Mus musculus	90.41	8.00e-105	373.00
IUUC-Mac-064468	Musa acuminata	38.67	4.00e-40	158.00
IUUC-Mpu-066389	Mustela putorius furo	97.03	3.00e-89	321.00
IUUC-Mlu-067999	Myotis lucifugus	95.13	2.00e-100	358.00
IUUC-Nfi-068390	Neosartorya fischeri	46.27	9.00e-19	87.40
IUUC-Ncr-068685	Neurospora crassa	44.78	2.00e-24	106.00
IUUC-Nle-069655	Nomascus leucogenys	95.35	7.00e-130	456.00
IUUC-Opr-070234	Ochotona princeps	87.65	9.00e-29	120.00
IUUC-Oan-073258	Ornithorhynchus anatinus	92.27	6.00e-52	196.00
IUUC-Ocu-074831	Oryctolagus cuniculus	94.01	5.00e-96	344.00
IUUC-Oba-075872	Oryza barthii	34.38	4.00e-33	135.00
IUUC-Obr-076909	Oryza brachyantha	37.05	9.00e-38	150.00
IUUC-Ogl-077021	Oryza glaberrima	34.38	4.00e-33	135.00
IUUC-Ogu-078101	Oryza glumaepatula	35.88	8.00e-35	140.00
IUUC-Olo-080559	Oryza longistaminata	34.88	2.00e-38	152.00
IUUC-Ome-081652	Oryza meridionalis	35.88	9.00e-35	140.00
IUUC-Oni-082847	Oryza nivara	34.38	4.00e-33	135.00
IUUC-Opu-083789	Oryza punctata	35.88	6.00e-35	141.00
IUUC-Ola-086540	Oryzias latipes	64.37	4.00e-65	241.00
IUUC-Olu-087843	Ostreococcus lucimarinus	42.36	2.00e-39	155.00
IUUC-Oga-088023	Otolemur garnettii	87.72	6.00e-124	437.00
IUUC-Oar-089964	Ovis aries	96.63	7.00e-122	430.00
IUUC-Ptr-091165	Pan troglodytes	98.73	4.00e-95	341.00
IUUC-Pan-092009	Papio anubis	94.36	1.00e-127	449.00
IUUC-Psi-093477	Pelodiscus sinensis	84.87	1.00e-82	299.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.11	3.00e-13	69.30
IUUC-Ppa-095654	Physcomitrella patens	37.65	6.00e-37	147.00
IUUC-Pfo-097385	Poecilia formosa	64.73	2.00e-71	262.00
IUUC-Pab-097868	Pongo abelii	98.73	1.00e-94	339.00
IUUC-Pop-099416	Populus trichocarpa	35.08	4.00e-41	161.00
IUUC-Pca-100652	Procavia capensis	96.00	6.00e-70	257.00
IUUC-Pva-102137	Pteropus vampyrus	100.00	1.00e-100	360.00
IUUC-Ptt-103717	Puccinia triticina	45.93	1.00e-25	110.00
IUUC-Pte-104303	Pyrenophora teres	50.00	6.00e-20	91.70
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	7.00e-20	91.30
IUUC-Rno-104844	Rattus norvegicus	88.80	1.00e-132	465.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	5.00e-13	68.60
IUUC-Sha-107073	Sarcophilus harrisii	87.71	1.00e-86	313.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	40.78	1.00e-38	153.00
IUUC-Spo-108298	Schizosaccharomyces pombe	42.45	1.00e-38	153.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	5.00e-17	81.60
IUUC-Sar-112925	Sorex araneus	89.85	1.00e-87	316.00
IUUC-Sbi-114459	Sorghum bicolor	34.50	8.00e-37	147.00
IUUC-Sre-114894	Sporisorium reilianum	51.61	4.00e-11	62.80
IUUC-Ssc-116329	Sus scrofa	99.25	4.00e-105	374.00
IUUC-Tgu-116918	Taeniopygia guttata	82.77	3.00e-87	315.00
IUUC-Tru-118651	Takifugu rubripes	62.66	2.00e-72	265.00
IUUC-Tsy-118836	Tarsius syrichta	99.26	1.00e-48	187.00
IUUC-Tni-120493	Tetraodon nigroviridis	63.04	7.00e-71	260.00
IUUC-Tre-121911	Trichoderma reesei	46.51	2.00e-16	79.30
IUUC-Tvi-122617	Trichoderma virens	46.51	2.00e-16	80.10
IUUC-Tae-124646	Triticum aestivum	36.59	2.00e-33	136.00
IUUC-Tur-126610	Triticum urartu	36.14	3.00e-33	136.00
IUUC-Tme-127092	Tuber melanosporum	51.49	9.00e-21	94.40
IUUC-Tbe-127493	Tupaia belangeri	81.11	2.00e-70	259.00
IUUC-Ttr-128464	Tursiops truncatus	98.87	8.00e-105	373.00
IUUC-Uma-129484	Ustilago maydis	47.54	1.00e-11	64.30
IUUC-Vda-129946	Verticillium dahliae	47.01	1.00e-17	84.00
IUUC-Vpa-130357	Vicugna pacos	92.98	1.00e-65	243.00
IUUC-Vvi-130842	Vitis vinifera	35.57	2.00e-38	152.00
IUUC-Xtr-132679	Xenopus tropicalis	80.50	7.00e-67	247.00
IUUC-Yli-134615	Yarrowia lipolytica	43.26	3.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence