iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000045019.7	ENSDART00000156543.2	ENSDARP00000128573.1
ENSDARG00000045019.7	ENSDART00000102127.4	ENSDARP00000092903.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-24	84.2	119	150
UBD/Beta-Prp	3.10e-42	145.7	167	408

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+dsv c+ f sd  l +sG   g+i+vW++
   Q: 119  GHKDSVVCVGFsSDsALAASGDMSGVIRVWSV 150
           8**********9887888999999******98 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk...ghedsvlsls 101
           + ++p  ++l++g +dg++  w++ +g + r++++   ++t+ ++ pdgk  + g eD+ +++wdl++g+ ++++k   gh   ++++s
   Q: 167  LEWHPCAPVLLAGVADGSVWMWKLPSGAC-RTFQSPGCQTTCGRILPDGKRAIVGYEDGSLRLWDLKQGTAIYVIKgqdGHRGALTCVS 254
           56799*********************999.***99999**************************************9999********* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvvhpdgnll...vsGslDrtvrlWdlktgkllrtltgghtd 181
           ++++g  l+sGs d  +++   ++g++l +        sg  +  n+v++ +++n+l   + + lD+t+ ++dl+t +l ++ +  h+ 
   Q: 255  SNQEGALLLSGSVDGQAKLISSSSGKVLCSfssqtsEGSGSAQDSNSVESVGFCNVLplaAVAYLDGTLAIYDLNTHTLRHQCK--HEV 341
           *******************999999999999999885566666667777777765433338899******************95..9** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
            v  l+++ ++  + ++sl g + lwd ++g  v +++gh++ +++  + ++    v+++ D   ++
   Q: 342  GVVQLQWEAESAVVCTCSLSGVLSLWDARSGVLVSEFHGHSAEILDFVLNREASVAVTAGGDHKAKV 408
           **************************************************99999999998876666 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDNPNPDDNP DPELEDTLQL HEDEEIELED TPQSPDALAD ELEDVCVADD DDDDGWQTED 60
ELMESEQDDS ELTFTRHTGS VFCVRLDPLT NSLAMSGGED DRAFLWRVCD GEVLLECTGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCAAGACAGT GTTGGCGCTT TCTACGGGTG TAGTAACGAG CAAACAAAGA AAACAAAGCA 60
CAAAGGCAGA ACATTTCATA GGTAAGATTA AGTTTTTAAT GTTTTTGTAT GTTCTGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	34.53	6.00e-52	199.00
IUUC-Aml-001781	Ailuropoda melanoleuca	66.10	1.00e-141	496.00
IUUC-Atr-003169	Amborella trichopoda	33.53	4.00e-54	205.00
IUUC-Apl-003939	Anas platyrhynchos	54.76	3.00e-95	341.00
IUUC-Aca-004594	Anolis carolinensis	62.78	1.00e-144	506.00
IUUC-Aly-006277	Arabidopsis lyrata	33.62	1.00e-47	184.00
IUUC-Ath-007701	Arabidopsis thaliana	35.57	9.00e-56	211.00
IUUC-Ago-007790	Ashbya gossypii	26.84	9.00e-20	91.30
IUUC-Acl-008079	Aspergillus clavatus	24.34	2.00e-09	57.00
IUUC-Ame-011651	Astyanax mexicanus	60.53	7.00e-144	503.00
IUUC-Bgr-012118	Blumeria graminis	23.61	3.00e-17	83.20
IUUC-Bta-012833	Bos taurus	66.10	2.00e-141	495.00
IUUC-Bdi-014289	Brachypodium distachyon	35.84	3.00e-57	215.00
IUUC-Bol-015313	Brassica oleracea	34.99	2.00e-53	202.00
IUUC-Bra-017670	Brassica rapa	31.49	2.00e-42	166.00
IUUC-Cel-018305	Caenorhabditis elegans	30.16	7.00e-35	141.00
IUUC-Cja-019433	Callithrix jacchus	65.82	7.00e-141	493.00
IUUC-Cfa-020093	Canis familiaris	65.54	6.00e-142	497.00
IUUC-Cpo-021742	Cavia porcellus	65.54	5.00e-141	494.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	30.81	6.00e-37	148.00
IUUC-Csa-023498	Chlorocebus sabaeus	65.82	1.00e-140	493.00
IUUC-Cho-024628	Choloepus hoffmanni	65.83	3.00e-108	385.00
IUUC-Cin-025244	Ciona intestinalis	45.06	3.00e-80	291.00
IUUC-Csv-026218	Ciona savignyi	45.09	2.00e-85	309.00
IUUC-Cne-026911	Cryptococcus neoformans	28.04	2.00e-28	120.00
IUUC-Dno-029297	Dasypus novemcinctus	65.25	8.00e-140	490.00
IUUC-Dor-030543	Dipodomys ordii	68.18	2.00e-43	169.00
IUUC-Dme-031587	Drosophila melanogaster	32.43	3.00e-45	176.00
IUUC-Ete-033100	Echinops telfairi	65.71	1.00e-87	316.00
IUUC-Eca-034277	Equus caballus	60.38	4.00e-142	498.00
IUUC-Eeu-035052	Erinaceus europaeus	64.73	3.00e-72	266.00
IUUC-Fca-036115	Felis catus	66.10	2.00e-142	498.00
IUUC-Fal-036864	Ficedula albicollis	66.76	2.00e-149	521.00
IUUC-Gmo-039090	Gadus morhua	60.89	3.00e-99	355.00
IUUC-Gga-040545	Gallus gallus	61.59	7.00e-152	530.00
IUUC-Gac-042027	Gasterosteus aculeatus	68.01	2.00e-146	512.00
IUUC-Gma-044168	Glycine max	36.87	4.00e-56	211.00
IUUC-Ggo-045036	Gorilla gorilla	66.10	6.00e-141	494.00
IUUC-Hsa-046749	Homo sapiens	66.10	6.00e-141	494.00
IUUC-Hvu-047247	Hordeum vulgare	34.69	3.00e-50	192.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	66.10	3.00e-141	494.00
IUUC-Kpa-049147	Komagataella pastoris	26.80	4.00e-26	112.00
IUUC-Lch-049747	Latimeria chalumnae	54.50	3.00e-128	451.00
IUUC-Lpe-051433	Leersia perrieri	33.05	5.00e-50	191.00
IUUC-Loc-052406	Lepisosteus oculatus	66.34	1.00e-159	556.00
IUUC-Lma-053153	Leptosphaeria maculans	26.82	1.00e-15	77.80
IUUC-Laf-053901	Loxodonta africana	66.10	2.00e-141	495.00
IUUC-Mcc-054990	Macaca mulatta	66.10	7.00e-141	493.00
IUUC-Meu-056844	Macropus eugenii	65.25	5.00e-141	494.00
IUUC-Mtr-057759	Medicago truncatula	35.69	6.00e-56	211.00
IUUC-Mla-058856	Melampsora laricipopulina	28.25	2.00e-35	143.00
IUUC-Mga-059749	Meleagris gallopavo	66.48	6.00e-149	520.00
IUUC-Mvi-060237	Microbotryum violaceum	33.88	1.00e-49	191.00
IUUC-Mmr-061270	Microcebus murinus	62.80	1.00e-137	483.00
IUUC-Mdo-062965	Monodelphis domestica	64.69	2.00e-140	492.00
IUUC-Mmu-064081	Mus musculus	66.38	7.00e-141	493.00
IUUC-Mac-065236	Musa acuminata	34.34	8.00e-53	201.00
IUUC-Mpu-066355	Mustela putorius furo	66.10	3.00e-142	498.00
IUUC-Mlu-067630	Myotis lucifugus	65.63	5.00e-140	491.00
IUUC-Nle-069701	Nomascus leucogenys	66.10	4.00e-141	494.00
IUUC-Opr-070337	Ochotona princeps	61.58	1.00e-126	446.00
IUUC-Ont-072614	Oreochromis niloticus	71.18	1.00e-153	536.00
IUUC-Ocu-073912	Oryctolagus cuniculus	66.38	2.00e-141	495.00
IUUC-Oba-075195	Oryza barthii	33.84	7.00e-51	194.00
IUUC-Obr-076059	Oryza brachyantha	33.53	2.00e-52	199.00
IUUC-Ogl-077318	Oryza glaberrima	33.82	2.00e-53	203.00
IUUC-Ogu-078579	Oryza glumaepatula	33.73	5.00e-51	195.00
IUUC-Oin-079340	Oryza indica	33.82	2.00e-53	203.00
IUUC-Olo-080813	Oryza longistaminata	34.04	4.00e-51	195.00
IUUC-Ome-081420	Oryza meridionalis	33.53	1.00e-49	190.00
IUUC-Oni-082650	Oryza nivara	33.84	7.00e-51	194.00
IUUC-Opu-083832	Oryza punctata	34.74	2.00e-52	199.00
IUUC-Oru-084207	Oryza rufipogon	33.84	7.00e-51	194.00
IUUC-Osa-085708	Oryza sativa	33.82	2.00e-53	203.00
IUUC-Ola-087164	Oryzias latipes	71.47	5.00e-153	534.00
IUUC-Olu-087824	Ostreococcus lucimarinus	31.93	1.00e-43	170.00
IUUC-Oga-088864	Otolemur garnettii	65.82	3.00e-141	494.00
IUUC-Oar-090115	Ovis aries	66.10	3.00e-141	494.00
IUUC-Ptr-091398	Pan troglodytes	66.10	4.00e-141	494.00
IUUC-Pan-092002	Papio anubis	66.10	5.00e-141	494.00
IUUC-Psi-093979	Pelodiscus sinensis	69.82	2.00e-73	268.00
IUUC-Pma-094618	Petromyzon marinus	54.95	3.00e-126	445.00
IUUC-Pno-095088	Phaeosphaeria nodorum	27.82	1.00e-12	69.30
IUUC-Ppa-095351	Physcomitrella patens	36.60	2.00e-61	229.00
IUUC-Pfo-097078	Poecilia formosa	69.74	8.00e-152	530.00
IUUC-Pab-098540	Pongo abelii	66.10	4.00e-141	494.00
IUUC-Pop-099140	Populus trichocarpa	36.28	5.00e-56	211.00
IUUC-Pca-101072	Procavia capensis	65.50	3.00e-135	474.00
IUUC-Ppe-101979	Prunus persica	35.40	2.00e-56	213.00
IUUC-Pva-102400	Pteropus vampyrus	59.32	2.00e-122	432.00
IUUC-Pgr-103362	Puccinia graminis	29.08	3.00e-41	162.00
IUUC-Ptt-103756	Puccinia triticina	29.64	1.00e-31	130.00
IUUC-Pte-104401	Pyrenophora teres	24.52	4.00e-10	59.70
IUUC-Rno-105672	Rattus norvegicus	66.67	1.00e-141	496.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	32.13	3.00e-45	176.00
IUUC-Spo-108208	Schizosaccharomyces pombe	32.53	2.00e-48	186.00
IUUC-Smo-109168	Selaginella moellendorffii	36.99	9.00e-56	211.00
IUUC-Sit-109978	Setaria italica	35.57	5.00e-54	205.00
IUUC-Sly-111316	Solanum lycopersicum	37.57	4.00e-60	225.00
IUUC-Stu-111956	Solanum tuberosum	36.99	4.00e-60	225.00
IUUC-Sbi-114189	Sorghum bicolor	36.15	8.00e-54	204.00
IUUC-Sre-115029	Sporisorium reilianum	30.47	1.00e-37	150.00
IUUC-Ssc-116045	Sus scrofa	58.41	1.00e-108	386.00
IUUC-Tgu-117514	Taeniopygia guttata	67.04	4.00e-149	521.00
IUUC-Tru-117851	Takifugu rubripes	69.41	2.00e-150	525.00
IUUC-Tsy-119140	Tarsius syrichta	61.86	4.00e-127	447.00
IUUC-Tni-120248	Tetraodon nigroviridis	71.55	4.00e-151	527.00
IUUC-Tca-121686	Theobroma cacao	34.10	2.00e-53	203.00
IUUC-Tae-123968	Triticum aestivum	34.59	6.00e-55	207.00
IUUC-Tur-126174	Triticum urartu	34.83	3.00e-52	199.00
IUUC-Tme-127079	Tuber melanosporum	28.57	6.00e-16	79.00
IUUC-Tbe-127476	Tupaia belangeri	64.25	9.00e-73	267.00
IUUC-Ttr-128182	Tursiops truncatus	65.25	2.00e-139	489.00
IUUC-Uma-129624	Ustilago maydis	31.36	2.00e-41	163.00
IUUC-Vpa-130605	Vicugna pacos	59.11	5.00e-105	374.00
IUUC-Vvi-131319	Vitis vinifera	33.63	8.00e-55	207.00
IUUC-Xtr-132193	Xenopus tropicalis	59.04	2.00e-146	512.00
IUUC-Xma-133880	Xiphophorus maculatus	70.03	1.00e-152	533.00
IUUC-Yli-134520	Yarrowia lipolytica	25.92	4.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence