iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121686

Ensembl Protein ID

EOY17448

UniProt Accession

A0A061FKK7; A0A061FKK7_THECC

Genbank Protein ID

EOY17448.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001886

Gene Name

TCM_036629

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_036629	EOY17449	EOY17449
TCM_036629	EOY17450	EOY17450
TCM_036629	EOY17448	EOY17448

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-46	154.0	98	129
UBD/Beta-Prp	7.70e-66	223.2	48	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtdsv++laf sd  ll+sG+ Dg +k+WD+
   Q: 98   GHTDSVSSLAFsSDgQLLASGGFDGLVKIWDT 129
           8***********999****************5 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           + +h+++gh+ ++++++ sp++   +++G++d+   +w++ +  + +  l+gh+++v+++++++dg+ll+sG+ D+ v++Wd  +g+l  tl+g   + ++
   Q: 48   DSIHIFTGHTGELYAVACSPTDpVLVATGGSDDRGFLWKIGHADWAS-ELQGHTDSVSSLAFSSDGQLLASGGFDGLVKIWDT-SGNLKCTLEG-PGGGIE 145
           679*****************99455668999***************9.**********************************9.*********9.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++ ++++g  ++sgs+d tv lw+  + +c++ + gh + v++ +f+p+++ + +gs+D ++riW+ rs + ++++ +h
   Q: 146  WVRWHPKGHLILSGSEDCTVWLWNADNRRCLNVFSGHGASVTCGDFTPDGKTICTGSDDATLRIWNPRSVESIHVVRGH 224
           *********************************************************************9999988776 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSKAGHEDDE LGEVFLDESD IIHEVDVDEE DLPDADDDDA GITEEPDDSI HIFTGHTGEL 60
YAVACSPTDP VLVATGGSDD RGFLWKIGHA DWASELQGHT DSVSSLAFSS DGQLLASGGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCGTGGC GTGGGGCCGC GAAAGGCTGG CATGCTAGGC GCTTTCGTCA GACGCGAAGC 60
TGCGCTCTCG TTTCCACTTT CCATATTGCT AAGGTTTTTT TTTAATTATT TAAAAATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	54.46	6.00e-106	377.00
IUUC-Aml-001781	Ailuropoda melanoleuca	32.03	1.00e-54	206.00
IUUC-Atr-003169	Amborella trichopoda	61.71	3.00e-130	456.00
IUUC-Aca-004594	Anolis carolinensis	32.77	1.00e-52	199.00
IUUC-Aly-006277	Arabidopsis lyrata	61.82	1.00e-126	445.00
IUUC-Ath-007701	Arabidopsis thaliana	65.62	2.00e-137	481.00
IUUC-Ame-011651	Astyanax mexicanus	30.06	5.00e-46	177.00
IUUC-Bta-012833	Bos taurus	32.59	2.00e-55	208.00
IUUC-Bdi-014289	Brachypodium distachyon	55.36	1.00e-111	395.00
IUUC-Bol-015389	Brassica oleracea	66.75	3.00e-141	493.00
IUUC-Bra-017115	Brassica rapa	63.66	3.00e-125	440.00
IUUC-Cja-019433	Callithrix jacchus	32.59	2.00e-55	208.00
IUUC-Cfa-020093	Canis familiaris	32.59	1.00e-55	209.00
IUUC-Cpo-021742	Cavia porcellus	32.59	2.00e-55	209.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	40.73	2.00e-67	248.00
IUUC-Csa-023498	Chlorocebus sabaeus	32.87	1.00e-55	209.00
IUUC-Cho-024628	Choloepus hoffmanni	34.15	1.00e-44	172.00
IUUC-Cin-025244	Ciona intestinalis	33.24	2.00e-50	192.00
IUUC-Csv-026218	Ciona savignyi	31.70	5.00e-46	177.00
IUUC-Cne-026911	Cryptococcus neoformans	28.76	1.00e-35	143.00
IUUC-Dre-028528	Danio rerio	33.81	5.00e-53	201.00
IUUC-Dno-029297	Dasypus novemcinctus	32.59	3.00e-55	208.00
IUUC-Ete-033100	Echinops telfairi	36.59	1.00e-36	145.00
IUUC-Eca-034277	Equus caballus	32.59	2.00e-55	208.00
IUUC-Fca-036115	Felis catus	32.59	1.00e-55	209.00
IUUC-Fal-036864	Ficedula albicollis	33.52	6.00e-59	220.00
IUUC-Gmo-039090	Gadus morhua	30.04	4.00e-36	144.00
IUUC-Gga-040545	Gallus gallus	33.71	2.00e-58	219.00
IUUC-Gac-042027	Gasterosteus aculeatus	34.99	5.00e-58	217.00
IUUC-Gma-044168	Glycine max	67.62	6.00e-140	489.00
IUUC-Ggo-045036	Gorilla gorilla	32.59	2.00e-55	208.00
IUUC-Hsa-046749	Homo sapiens	32.59	2.00e-55	208.00
IUUC-Hvu-047217	Hordeum vulgare	53.61	4.00e-111	394.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	32.58	3.00e-55	208.00
IUUC-Lch-049747	Latimeria chalumnae	31.79	8.00e-46	177.00
IUUC-Lpe-051433	Leersia perrieri	56.86	2.00e-113	401.00
IUUC-Loc-052406	Lepisosteus oculatus	35.73	3.00e-59	221.00
IUUC-Laf-053901	Loxodonta africana	32.59	3.00e-55	208.00
IUUC-Mcc-054990	Macaca mulatta	32.59	2.00e-55	208.00
IUUC-Meu-056844	Macropus eugenii	32.49	2.00e-54	205.00
IUUC-Mtr-057759	Medicago truncatula	64.33	3.00e-123	434.00
IUUC-Mla-058856	Melampsora laricipopulina	32.23	3.00e-46	178.00
IUUC-Mga-059749	Meleagris gallopavo	33.80	7.00e-59	220.00
IUUC-Mvi-060237	Microbotryum violaceum	32.51	2.00e-52	198.00
IUUC-Mmr-061270	Microcebus murinus	31.38	2.00e-52	199.00
IUUC-Mdo-062965	Monodelphis domestica	32.49	3.00e-55	208.00
IUUC-Mmu-064081	Mus musculus	32.87	4.00e-56	211.00
IUUC-Mac-065236	Musa acuminata	65.18	7.00e-130	455.00
IUUC-Mpu-066355	Mustela putorius furo	32.59	1.00e-55	209.00
IUUC-Mlu-067630	Myotis lucifugus	32.50	6.00e-54	204.00
IUUC-Nle-069701	Nomascus leucogenys	32.59	2.00e-55	209.00
IUUC-Opr-070337	Ochotona princeps	30.08	3.00e-46	178.00
IUUC-Ont-072614	Oreochromis niloticus	33.53	1.00e-55	209.00
IUUC-Ocu-073912	Oryctolagus cuniculus	32.31	8.00e-55	206.00
IUUC-Oba-075195	Oryza barthii	59.16	3.00e-114	404.00
IUUC-Obr-076059	Oryza brachyantha	58.26	1.00e-117	415.00
IUUC-Ogl-077318	Oryza glaberrima	58.55	2.00e-117	414.00
IUUC-Ogu-078579	Oryza glumaepatula	59.10	2.00e-115	407.00
IUUC-Oin-079340	Oryza indica	58.55	2.00e-117	414.00
IUUC-Olo-080813	Oryza longistaminata	59.40	3.00e-115	407.00
IUUC-Ome-081420	Oryza meridionalis	58.86	1.00e-113	401.00
IUUC-Oni-082650	Oryza nivara	59.16	3.00e-114	404.00
IUUC-Opu-083832	Oryza punctata	59.16	2.00e-114	404.00
IUUC-Oru-084207	Oryza rufipogon	59.16	3.00e-114	404.00
IUUC-Osa-085708	Oryza sativa	58.55	2.00e-117	414.00
IUUC-Ola-087164	Oryzias latipes	33.24	6.00e-55	207.00
IUUC-Olu-087824	Ostreococcus lucimarinus	40.23	6.00e-57	213.00
IUUC-Oga-088864	Otolemur garnettii	32.59	2.00e-55	209.00
IUUC-Oar-090115	Ovis aries	32.31	7.00e-55	207.00
IUUC-Ptr-091398	Pan troglodytes	32.59	2.00e-55	208.00
IUUC-Pan-092002	Papio anubis	32.59	2.00e-55	208.00
IUUC-Pma-094618	Petromyzon marinus	31.28	2.00e-49	188.00
IUUC-Ppa-095351	Physcomitrella patens	55.49	6.00e-109	386.00
IUUC-Pfo-097078	Poecilia formosa	34.02	5.00e-56	211.00
IUUC-Pab-098540	Pongo abelii	32.59	2.00e-55	209.00
IUUC-Pop-099140	Populus trichocarpa	71.59	7.00e-145	505.00
IUUC-Pca-101072	Procavia capensis	31.56	2.00e-50	192.00
IUUC-Ppe-101979	Prunus persica	71.88	6.00e-145	506.00
IUUC-Pva-102400	Pteropus vampyrus	28.13	2.00e-42	166.00
IUUC-Pgr-103362	Puccinia graminis	30.79	4.00e-47	181.00
IUUC-Ptt-103756	Puccinia triticina	35.15	2.00e-34	138.00
IUUC-Rno-105672	Rattus norvegicus	32.59	2.00e-55	208.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	29.66	3.00e-43	168.00
IUUC-Spo-108208	Schizosaccharomyces pombe	28.33	4.00e-41	161.00
IUUC-Smo-109093	Selaginella moellendorffii	49.57	7.00e-96	343.00
IUUC-Sit-109978	Setaria italica	58.84	1.00e-119	422.00
IUUC-Sly-111316	Solanum lycopersicum	68.68	1.00e-139	488.00
IUUC-Stu-111956	Solanum tuberosum	68.10	1.00e-138	485.00
IUUC-Sbi-114189	Sorghum bicolor	57.10	9.00e-113	399.00
IUUC-Sre-115029	Sporisorium reilianum	34.90	4.00e-52	198.00
IUUC-Ssc-115726	Sus scrofa	36.04	2.00e-40	157.00
IUUC-Tgu-117514	Taeniopygia guttata	33.43	1.00e-58	219.00
IUUC-Tru-117851	Takifugu rubripes	32.37	2.00e-55	209.00
IUUC-Tsy-119140	Tarsius syrichta	31.20	7.00e-49	187.00
IUUC-Tni-120248	Tetraodon nigroviridis	33.33	2.00e-57	215.00
IUUC-Tae-125689	Triticum aestivum	54.62	1.00e-109	389.00
IUUC-Tur-126174	Triticum urartu	52.64	1.00e-106	378.00
IUUC-Ttr-128182	Tursiops truncatus	32.59	4.00e-55	207.00
IUUC-Uma-129624	Ustilago maydis	33.43	2.00e-50	192.00
IUUC-Vpa-130605	Vicugna pacos	30.84	3.00e-42	165.00
IUUC-Vvi-131747	Vitis vinifera	68.62	5.00e-146	509.00
IUUC-Xtr-132193	Xenopus tropicalis	32.86	5.00e-58	217.00
IUUC-Xma-133880	Xiphophorus maculatus	33.82	2.00e-56	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence