iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007543

UUCD1 version

UUC-ArT-01360

Ensembl Protein ID

AT4G35480.1

UniProt Accession

Q9ZT49; Q4TU10; ATL45_ARATH

Genbank Protein ID

AAC68674.1; AAY57612.1; CAB54876.1; CAB80264.1; AEE86520.1; ABR46213.1; AAM64643.1

Protein Name

Probable E3 ubiquitin-protein ligase ATL45; RING-H2 finger A3b; RING-H2 finger protein ATL45; RING-H2 zinc finger protein RHA3b; RING-type E3 ubiquitin transferase ATL45

Genbank Nucleotide ID

AF078825; DQ059126; AL117188; AL161587; CP002687; BT030633; AY087082

Gene Name

ATL45; RHA3B; At4g35480; F15J1.50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G35480	AT4G35480.1	AT4G35480.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.6	113	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC ++f   ++ ++lp C H+fh  C+ kw         + +CP Cr
   Q: 113  CAICITEFseGEEIRILPlCSHAFHVACIDKW------LTSRSSCPSCR 155
           ********66334*******************......999*******8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Probable E3 ubiquitin-protein ligase that may possess E3 ubiquitin ligase activity in vitro (By similarity). May be involved in the early steps of the plant defense signaling pathway (Probable).

Protein Sequence
(Fasta)

MTRSSRFLGT ASPPPPEEIL AAETDMVVIL SALLCALVCV AGLAAVARCA WLRRLTGVNP 60
AAVGEAPPPN KGLKKKALQA LPKSTYTASA STAAAADDLP CSSVGDGDSS TECAICITEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACACTA CTTATTAATA TTTAATTAAT TTTAATCTGC AATTTGGACA TGTCTTATAT 60
AAGTATAGAT GTGTATGTGT GTGTCTCTAT TATAACTTGG ATCAGATTCT TCTTCTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010200--P:response to chitin

KEGG

ath:AT4G35480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001407	Ailuropoda melanoleuca	49.21	8.00e-16	78.20
IUUC-Aly-006022	Arabidopsis lyrata	96.00	3.00e-102	363.00
IUUC-Bta-013113	Bos taurus	49.21	1.00e-15	77.40
IUUC-Bol-015176	Brassica oleracea	77.23	5.00e-69	252.00
IUUC-Bra-017468	Brassica rapa	79.10	4.00e-64	236.00
IUUC-Cja-018860	Callithrix jacchus	49.21	2.00e-15	77.00
IUUC-Cfa-020358	Canis familiaris	49.21	6.00e-16	78.60
IUUC-Csa-023242	Chlorocebus sabaeus	49.21	1.00e-15	77.40
IUUC-Dno-029105	Dasypus novemcinctus	49.21	2.00e-16	80.10
IUUC-Eca-033976	Equus caballus	49.21	1.00e-15	77.80
IUUC-Eeu-034964	Erinaceus europaeus	49.21	6.00e-16	78.60
IUUC-Ggo-044754	Gorilla gorilla	49.21	1.00e-15	77.80
IUUC-Hsa-045776	Homo sapiens	49.21	1.00e-15	77.80
IUUC-Itr-048774	Ictidomys tridecemlineatus	53.23	2.00e-16	79.70
IUUC-Laf-054328	Loxodonta africana	49.21	9.00e-16	77.80
IUUC-Mcc-054739	Macaca mulatta	49.21	1.00e-15	77.40
IUUC-Meu-056359	Macropus eugenii	47.62	9.00e-16	78.20
IUUC-Mmr-060608	Microcebus murinus	49.21	1.00e-15	77.80
IUUC-Mpu-066258	Mustela putorius furo	49.21	1.00e-15	77.40
IUUC-Ocu-073795	Oryctolagus cuniculus	49.21	9.00e-16	77.80
IUUC-Oar-089348	Ovis aries	49.21	1.00e-15	77.40
IUUC-Ptr-090604	Pan troglodytes	49.21	1.00e-15	77.40
IUUC-Pan-092322	Papio anubis	49.21	1.00e-15	77.40
IUUC-Pab-098671	Pongo abelii	49.21	1.00e-15	77.80
IUUC-Pva-102709	Pteropus vampyrus	47.62	6.00e-15	75.10
IUUC-Rno-105759	Rattus norvegicus	49.21	1.00e-15	77.40
IUUC-Sha-106792	Sarcophilus harrisii	47.62	4.00e-16	79.30
IUUC-Ssc-115738	Sus scrofa	49.21	1.00e-15	77.80
IUUC-Tbe-127543	Tupaia belangeri	49.21	1.00e-15	77.80

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence