iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00008852	F15C11.2a	F15C11.2a
WBGene00008852	F15C11.2b	F15C11.2b
WBGene00008852	F15C11.2c	F15C11.2c

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	iRefIndex
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.20e-09	37.4	463	500
ULD/UDP/UBQ/UBQ_PIM	4.20e-15	55.8	8	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGF.dreealqaLraannnleaAveyLld 40
            ++leql++MGF dr +++ aL a++++l+aAve+Ll+
   Q: 463  ASQLEQLQSMGFsDRARNVAALTATFGDLNAAVERLLN 500
           589*********************************97 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg.vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           +k++vk   ++++ +e+  d +v+elK+k+        +eq  +Iy GkiLkD++tL +++i dg++vhlv++++
   Q: 8    IKVHVKS-PSNKYDVEIAADASVSELKDKVLVFVPtANKEQVCIIYTGKILKDEETLTQHKIADGHTVHLVIRNQ 81
           6899999.56677*******************966555**********************************987 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MATESALIKV HVKSPSNKYD VEIAADASVS ELKDKVLVFV PTANKEQVCI IYTGKILKDE 60
ETLTQHKIAD GHTVHLVIRN QARPTPAPAA ATPTASSAPS SNPTPSSQPN PTNNPFAAMG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACAG AGAGTGCACT CATCAAAGTT CACGTGAAAT CACCGTCGAA CAAGTATGAC 60
GTTGAGATTG CTGCGGATGC ATCAGTTTCA GAAGTATGTT ATATTTTATT TAAAAAATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

cel:CELE_F15C11.2

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000864	Aegilops tauschii	43.17	2.00e-30	125.00
IUUC-Aml-001461	Ailuropoda melanoleuca	38.73	2.00e-66	245.00
IUUC-Atr-002470	Amborella trichopoda	35.61	4.00e-44	171.00
IUUC-Apl-003241	Anas platyrhynchos	36.17	2.00e-67	248.00
IUUC-Aca-004511	Anolis carolinensis	37.02	2.00e-69	255.00
IUUC-Aly-005736	Arabidopsis lyrata	34.95	3.00e-50	191.00
IUUC-Ath-007271	Arabidopsis thaliana	35.41	1.00e-49	189.00
IUUC-Ago-007963	Ashbya gossypii	29.78	4.00e-16	77.40
IUUC-Acl-008361	Aspergillus clavatus	28.19	2.00e-11	62.40
IUUC-Afl-008403	Aspergillus flavus	28.44	3.00e-13	68.60
IUUC-Afu-009029	Aspergillus fumigatus	41.77	1.00e-10	60.10
IUUC-Ani-009418	Aspergillus nidulans	38.96	3.00e-10	58.50
IUUC-Ang-009826	Aspergillus niger	30.40	1.00e-13	69.30
IUUC-Aor-010091	Aspergillus oryzae	28.44	3.00e-13	68.60
IUUC-Ate-010419	Aspergillus terreus	31.25	5.00e-15	74.30
IUUC-Ame-011329	Astyanax mexicanus	36.01	2.00e-75	275.00
IUUC-Bgr-012188	Blumeria graminis	25.69	3.00e-09	54.70
IUUC-Bta-013048	Bos taurus	38.35	2.00e-69	255.00
IUUC-Bci-013628	Botrytis cinerea	27.27	2.00e-08	52.40
IUUC-Bdi-014506	Brachypodium distachyon	32.60	2.00e-48	185.00
IUUC-Bol-016303	Brassica oleracea	33.58	1.00e-53	202.00
IUUC-Bra-017101	Brassica rapa	32.50	1.00e-55	209.00
IUUC-Cja-019976	Callithrix jacchus	39.08	3.00e-71	261.00
IUUC-Cfa-020092	Canis familiaris	39.08	1.00e-70	259.00
IUUC-Cpo-022388	Cavia porcellus	39.08	1.00e-69	256.00
IUUC-Cre-022634	Chlamydomonas reinhardtii	45.45	7.00e-11	60.10
IUUC-Csa-024087	Chlorocebus sabaeus	38.44	3.00e-70	258.00
IUUC-Cho-024834	Choloepus hoffmanni	38.59	1.00e-70	259.00
IUUC-Cin-025136	Ciona intestinalis	36.55	6.00e-57	213.00
IUUC-Csv-026009	Ciona savignyi	40.43	2.00e-45	175.00
IUUC-Cne-026833	Cryptococcus neoformans	29.25	6.00e-15	73.90
IUUC-Cme-027155	Cyanidioschyzon merolae	48.11	6.00e-30	124.00
IUUC-Dre-028009	Danio rerio	35.82	3.00e-65	241.00
IUUC-Dno-029892	Dasypus novemcinctus	33.33	3.00e-39	155.00
IUUC-Dor-030519	Dipodomys ordii	38.98	7.00e-70	256.00
IUUC-Dse-031421	Dothistroma septosporum	28.90	3.00e-10	58.50
IUUC-Dme-032013	Drosophila melanogaster	36.29	6.00e-71	260.00
IUUC-Ete-032273	Echinops telfairi	38.35	2.00e-70	258.00
IUUC-Eca-033667	Equus caballus	38.35	1.00e-68	252.00
IUUC-Eeu-034865	Erinaceus europaeus	30.67	3.00e-35	141.00
IUUC-Fca-036179	Felis catus	37.92	9.00e-67	246.00
IUUC-Fal-037642	Ficedula albicollis	37.53	3.00e-69	254.00
IUUC-Fox-037726	Fusarium oxysporum	50.00	3.00e-08	52.00
IUUC-Fso-038204	Fusarium solani	50.82	4.00e-09	54.70
IUUC-Gmo-039317	Gadus morhua	39.05	9.00e-66	243.00
IUUC-Ggr-039961	Gaeumannomyces graminis	28.51	1.00e-10	59.30
IUUC-Gga-041264	Gallus gallus	38.93	7.00e-71	260.00
IUUC-Gac-041826	Gasterosteus aculeatus	37.77	1.00e-65	243.00
IUUC-Gma-043430	Glycine max	32.75	6.00e-39	154.00
IUUC-Ggo-044969	Gorilla gorilla	38.83	2.00e-69	255.00
IUUC-Hsa-046669	Homo sapiens	38.83	2.00e-71	261.00
IUUC-Hvu-047533	Hordeum vulgare	63.64	3.00e-10	57.40
IUUC-Itr-048337	Ictidomys tridecemlineatus	38.14	2.00e-67	248.00
IUUC-Lch-050192	Latimeria chalumnae	41.96	2.00e-60	225.00
IUUC-Lpe-051401	Leersia perrieri	29.92	2.00e-26	112.00
IUUC-Loc-052846	Lepisosteus oculatus	38.74	3.00e-48	184.00
IUUC-Lma-053152	Leptosphaeria maculans	28.44	4.00e-11	61.60
IUUC-Laf-054278	Loxodonta africana	38.35	6.00e-69	253.00
IUUC-Mcc-055680	Macaca mulatta	38.83	2.00e-71	261.00
IUUC-Meu-056843	Macropus eugenii	35.37	3.00e-51	195.00
IUUC-Mor-057194	Magnaporthe oryzae	54.55	3.00e-07	48.50
IUUC-Mpo-057467	Magnaporthe poae	52.27	1.00e-07	47.00
IUUC-Mtr-058674	Medicago truncatula	32.41	2.00e-41	162.00
IUUC-Mla-058987	Melampsora laricipopulina	27.78	4.00e-07	47.80
IUUC-Mga-059894	Meleagris gallopavo	35.60	2.00e-64	238.00
IUUC-Mvi-060466	Microbotryum violaceum	33.68	2.00e-11	62.40
IUUC-Mmr-061094	Microcebus murinus	38.83	3.00e-71	261.00
IUUC-Mdo-062728	Monodelphis domestica	36.54	1.00e-66	246.00
IUUC-Mmu-064088	Mus musculus	35.60	2.00e-80	291.00
IUUC-Mac-065526	Musa acuminata	35.31	5.00e-40	157.00
IUUC-Mpu-066282	Mustela putorius furo	38.39	6.00e-68	250.00
IUUC-Mlu-068158	Myotis lucifugus	38.16	1.00e-66	245.00
IUUC-Nfi-068487	Neosartorya fischeri	43.04	3.00e-11	61.60
IUUC-Ncr-068732	Neurospora crassa	32.24	1.00e-08	53.10
IUUC-Nle-069321	Nomascus leucogenys	38.83	2.00e-71	261.00
IUUC-Opr-071098	Ochotona princeps	41.06	2.00e-61	228.00
IUUC-Ont-072038	Oreochromis niloticus	39.39	2.00e-57	216.00
IUUC-Oan-072808	Ornithorhynchus anatinus	39.13	5.00e-69	253.00
IUUC-Ocu-074301	Oryctolagus cuniculus	36.14	4.00e-77	280.00
IUUC-Oba-074973	Oryza barthii	31.11	1.00e-39	155.00
IUUC-Obr-076444	Oryza brachyantha	46.97	1.00e-25	110.00
IUUC-Ogl-077319	Oryza glaberrima	31.11	5.00e-40	157.00
IUUC-Ogu-078074	Oryza glumaepatula	31.11	5.00e-42	164.00
IUUC-Oin-079142	Oryza indica	30.39	9.00e-40	156.00
IUUC-Olo-080565	Oryza longistaminata	31.27	1.00e-40	159.00
IUUC-Ome-081155	Oryza meridionalis	46.97	1.00e-25	109.00
IUUC-Oni-082272	Oryza nivara	30.39	9.00e-40	156.00
IUUC-Opu-083241	Oryza punctata	31.36	2.00e-43	169.00
IUUC-Oru-085257	Oryza rufipogon	30.39	9.00e-40	156.00
IUUC-Osa-086257	Oryza sativa	31.11	5.00e-40	157.00
IUUC-Ola-086802	Oryzias latipes	36.10	2.00e-66	245.00
IUUC-Olu-087597	Ostreococcus lucimarinus	29.32	2.00e-21	95.10
IUUC-Oga-088495	Otolemur garnettii	38.35	1.00e-68	252.00
IUUC-Oar-089711	Ovis aries	37.62	2.00e-68	252.00
IUUC-Ptr-091439	Pan troglodytes	38.59	2.00e-69	255.00
IUUC-Pan-092641	Papio anubis	38.83	2.00e-71	261.00
IUUC-Psi-093518	Pelodiscus sinensis	37.38	4.00e-68	251.00
IUUC-Pma-094727	Petromyzon marinus	34.12	3.00e-14	72.00
IUUC-Pno-094908	Phaeosphaeria nodorum	42.86	2.00e-07	48.50
IUUC-Ppa-095193	Physcomitrella patens	48.87	7.00e-33	134.00
IUUC-Pfo-096638	Poecilia formosa	35.48	3.00e-79	288.00
IUUC-Pab-098699	Pongo abelii	39.25	2.00e-72	265.00
IUUC-Pop-099549	Populus trichocarpa	31.16	2.00e-44	172.00
IUUC-Pca-100194	Procavia capensis	40.53	5.00e-36	144.00
IUUC-Ppe-101901	Prunus persica	33.87	5.00e-48	184.00
IUUC-Pva-102513	Pteropus vampyrus	50.68	1.00e-38	153.00
IUUC-Pgr-103261	Puccinia graminis	25.37	8.00e-09	53.10
IUUC-Ptt-103817	Puccinia triticina	27.27	2.00e-09	55.50
IUUC-Pte-104090	Pyrenophora teres	44.12	6.00e-08	50.80
IUUC-Pyt-104472	Pyrenophora triticirepentis	37.33	6.00e-08	50.80
IUUC-Rno-104908	Rattus norvegicus	36.50	1.00e-83	302.00
IUUC-Sce-106332	Saccharomyces cerevisiae	30.91	3.00e-19	87.80
IUUC-Sha-106881	Sarcophilus harrisii	36.63	1.00e-65	243.00
IUUC-Spo-108223	Schizosaccharomyces pombe	26.70	6.00e-12	63.50
IUUC-Ssl-108425	Sclerotinia sclerotiorum	52.38	1.00e-06	45.40
IUUC-Smo-108910	Selaginella moellendorffii	33.17	1.00e-41	163.00
IUUC-Sit-110766	Setaria italica	33.83	5.00e-36	144.00
IUUC-Sly-111240	Solanum lycopersicum	46.79	7.00e-25	107.00
IUUC-Stu-112263	Solanum tuberosum	31.89	4.00e-38	151.00
IUUC-Sar-113648	Sorex araneus	36.45	4.00e-47	181.00
IUUC-Sbi-114307	Sorghum bicolor	33.25	1.00e-44	172.00
IUUC-Sre-115081	Sporisorium reilianum	28.63	3.00e-15	74.70
IUUC-Ssc-115820	Sus scrofa	38.59	1.00e-70	259.00
IUUC-Tgu-116845	Taeniopygia guttata	36.74	3.00e-65	241.00
IUUC-Tru-118652	Takifugu rubripes	37.01	2.00e-54	206.00
IUUC-Tsy-119008	Tarsius syrichta	37.19	6.00e-62	230.00
IUUC-Tni-119780	Tetraodon nigroviridis	36.10	5.00e-61	227.00
IUUC-Tca-121558	Theobroma cacao	32.69	5.00e-45	174.00
IUUC-Tre-122085	Trichoderma reesei	57.14	2.00e-07	48.90
IUUC-Tvi-122381	Trichoderma virens	27.07	7.00e-08	50.40
IUUC-Tae-125419	Triticum aestivum	43.17	1.00e-30	126.00
IUUC-Tur-126783	Triticum urartu	33.85	5.00e-31	127.00
IUUC-Tme-127116	Tuber melanosporum	29.87	1.00e-10	59.30
IUUC-Tbe-127379	Tupaia belangeri	37.91	6.00e-52	197.00
IUUC-Ttr-128630	Tursiops truncatus	38.35	4.00e-70	258.00
IUUC-Uma-129639	Ustilago maydis	29.06	4.00e-16	77.80
IUUC-Vda-129991	Verticillium dahliae	30.32	3.00e-09	55.10
IUUC-Vpa-130413	Vicugna pacos	33.00	1.00e-39	156.00
IUUC-Vvi-131599	Vitis vinifera	34.83	1.00e-38	152.00
IUUC-Xtr-132595	Xenopus tropicalis	38.21	9.00e-69	253.00
IUUC-Xma-134155	Xiphophorus maculatus	34.92	3.00e-72	264.00
IUUC-Yli-134630	Yarrowia lipolytica	28.05	4.00e-09	53.90
IUUC-Zma-135661	Zea mays	33.74	5.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence