iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000044056.8	ENSDART00000149873.2	ENSDARP00000124155.1
ENSDARG00000044056.8	ENSDART00000148403.1	ENSDARP00000124018.1
ENSDARG00000044056.8	ENSDART00000064668.6	ENSDARP00000064667.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-15	57.5	589	621
UBD/SH3	2.60e-12	47.4	1027	1081

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH + v++l++  +d+ l+++s Dgt++vW++ 
   Q: 589  GHLSVVYDLCWsrDDKGLLTASSDGTVRVWNVE 621
           8***********555669*************85 PP

UBD/SH3

   S: 3    kekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFve 60
           +++v  ly+y a+ +deL++++Gdvv+v+  ++ +  W+ g +  +g++G fP+ +v+
   Q: 1027 HQTVVSLYEYRANRSDELSMRRGDVVHVL--YKDNDSWWFG-RLVSGQEGYFPASYVA 1081
           789999***********************..889999****.59************96 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MPAGQSDVRA KTKARFDEVL KRYTNPPSEK KKAKQISDQS QEIIVLQTLK KNLDLSKDTE 60
DDEAILHNTY DPAQGSPRYT KNRRREREVS EKTNLNNAVS EEESTLTSGK RKSKRKLPQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCTCTTG GAAACAACCA GCAATGGCTG CTCGCTGAAG TCATTCATGG ATCCGCTACA 60
GCATACATGA CTGGACTTCT TCGCAACATT TACTGGATAT ACGGTACGTT AACTTCATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR001452--SH3_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50002--SH3
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00018--SH3_1
PF00400--WD40

PRINTS

PR00452--SH3DOMAIN

SMART

SM00326--SH3
SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0007368--P:determination of left/right symmetry
GO:0044458--P:motile cilium assembly
GO:0071599--P:otic vesicle development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001943	Ailuropoda melanoleuca	56.22	0.00e+00	810.00
IUUC-Apl-004057	Anas platyrhynchos	50.35	0.00e+00	947.00
IUUC-Aca-004306	Anolis carolinensis	54.91	0.00e+00	946.00
IUUC-Ame-010981	Astyanax mexicanus	70.77	0.00e+00	1568.00
IUUC-Bta-013129	Bos taurus	51.50	0.00e+00	881.00
IUUC-Cja-018979	Callithrix jacchus	52.40	0.00e+00	798.00
IUUC-Cfa-020121	Canis familiaris	50.66	0.00e+00	877.00
IUUC-Cpo-022219	Cavia porcellus	52.53	0.00e+00	744.00
IUUC-Csa-023991	Chlorocebus sabaeus	51.43	0.00e+00	884.00
IUUC-Cho-024782	Choloepus hoffmanni	61.05	4.00e-134	473.00
IUUC-Cin-025149	Ciona intestinalis	40.64	7.00e-155	541.00
IUUC-Csv-026188	Ciona savignyi	40.41	4.00e-135	475.00
IUUC-Dno-029756	Dasypus novemcinctus	50.73	0.00e+00	840.00
IUUC-Dor-030821	Dipodomys ordii	44.95	7.00e-168	585.00
IUUC-Ete-032237	Echinops telfairi	51.17	0.00e+00	874.00
IUUC-Eca-033491	Equus caballus	49.71	0.00e+00	878.00
IUUC-Eeu-034812	Erinaceus europaeus	39.78	3.00e-137	483.00
IUUC-Fca-035868	Felis catus	51.28	0.00e+00	871.00
IUUC-Fal-037571	Ficedula albicollis	61.46	0.00e+00	755.00
IUUC-Gmo-039358	Gadus morhua	62.06	0.00e+00	1050.00
IUUC-Gga-040233	Gallus gallus	54.55	0.00e+00	966.00
IUUC-Gac-041744	Gasterosteus aculeatus	63.24	0.00e+00	1100.00
IUUC-Ggo-044766	Gorilla gorilla	49.77	0.00e+00	876.00
IUUC-Hsa-046660	Homo sapiens	49.89	0.00e+00	882.00
IUUC-Itr-048282	Ictidomys tridecemlineatus	51.28	0.00e+00	881.00
IUUC-Loc-052658	Lepisosteus oculatus	55.52	0.00e+00	1299.00
IUUC-Laf-053564	Loxodonta africana	55.83	0.00e+00	796.00
IUUC-Mcc-055480	Macaca mulatta	51.79	0.00e+00	895.00
IUUC-Meu-056362	Macropus eugenii	54.03	0.00e+00	738.00
IUUC-Mga-060033	Meleagris gallopavo	54.59	0.00e+00	937.00
IUUC-Mmr-061075	Microcebus murinus	50.90	0.00e+00	877.00
IUUC-Mdo-062818	Monodelphis domestica	47.19	0.00e+00	1059.00
IUUC-Mmu-063987	Mus musculus	50.12	0.00e+00	841.00
IUUC-Mpu-066242	Mustela putorius furo	49.77	0.00e+00	873.00
IUUC-Mlu-067123	Myotis lucifugus	50.79	0.00e+00	839.00
IUUC-Nle-069793	Nomascus leucogenys	50.11	0.00e+00	885.00
IUUC-Opr-071110	Ochotona princeps	53.35	1.00e-108	388.00
IUUC-Ont-072179	Oreochromis niloticus	59.13	0.00e+00	1258.00
IUUC-Oan-073201	Ornithorhynchus anatinus	61.40	1.00e-125	442.00
IUUC-Ocu-074224	Oryctolagus cuniculus	50.72	0.00e+00	870.00
IUUC-Ola-086818	Oryzias latipes	67.13	1.00e-90	325.00
IUUC-Oga-088338	Otolemur garnettii	51.04	0.00e+00	870.00
IUUC-Oar-089247	Ovis aries	50.96	0.00e+00	879.00
IUUC-Ptr-090830	Pan troglodytes	51.43	0.00e+00	888.00
IUUC-Pan-092469	Papio anubis	50.46	0.00e+00	894.00
IUUC-Psi-093183	Pelodiscus sinensis	56.35	0.00e+00	1033.00
IUUC-Pma-094415	Petromyzon marinus	48.39	6.00e-162	564.00
IUUC-Pfo-096577	Poecilia formosa	58.07	0.00e+00	1105.00
IUUC-Pab-098236	Pongo abelii	51.72	0.00e+00	783.00
IUUC-Pca-100560	Procavia capensis	40.88	2.00e-155	543.00
IUUC-Pva-102565	Pteropus vampyrus	57.71	0.00e+00	774.00
IUUC-Rno-104881	Rattus norvegicus	49.64	0.00e+00	848.00
IUUC-Sha-106577	Sarcophilus harrisii	58.27	1.00e-140	492.00
IUUC-Sar-113265	Sorex araneus	44.43	0.00e+00	729.00
IUUC-Ssc-116174	Sus scrofa	49.94	0.00e+00	869.00
IUUC-Tru-117761	Takifugu rubripes	55.99	0.00e+00	988.00
IUUC-Tsy-119557	Tarsius syrichta	61.08	5.00e-128	452.00
IUUC-Tni-119782	Tetraodon nigroviridis	61.67	0.00e+00	1051.00
IUUC-Tbe-127529	Tupaia belangeri	29.54	1.00e-38	155.00
IUUC-Ttr-128444	Tursiops truncatus	55.83	0.00e+00	774.00
IUUC-Vpa-130337	Vicugna pacos	46.11	0.00e+00	728.00
IUUC-Xtr-132055	Xenopus tropicalis	60.36	0.00e+00	783.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence