iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131111

Ensembl Protein ID

VIT_03s0091g00200.t01

UniProt Accession

F6H6A4; F6H6A4_VITVI

Genbank Protein ID

CCB47733.1

Protein Name

DNA repair protein REV1

Genbank Nucleotide ID

FN595242

Gene Name

REV1; VIT_03s0091g00200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0091g00200	VIT_03s0091g00200.t01	VIT_03s0091g00200.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	29.26	7.00e-47	184.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MSLNSSRSAN SGERSKRSLN STSSNPSNNS GKKRKTGNQK TLGMAWGSNS RSSSRSSFRN 60
SPFSDFGSYM VEKNRKLQNQ FDAGASSSSH SALSSGKPIF HGVSVFVDGF TIPSSQELRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCCCGGAA AAAAGAAAAA AAATGAGCCT CAATTCATCT CGCTCCGCCA ACTCCGGCGA 60
AAGGTCAAAG AGAAGCCTGA ACTCAACCTC TTCAAACCCT TCCAACAATA GCGGGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR012112--REV1
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0042276--P:error-prone translesion synthesis
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	40.25	5.00e-109	387.00
IUUC-Aml-001185	Ailuropoda melanoleuca	32.21	2.00e-86	313.00
IUUC-Atr-002915	Amborella trichopoda	47.28	0.00e+00	961.00
IUUC-Apl-004054	Anas platyrhynchos	32.69	3.00e-85	310.00
IUUC-Aca-004304	Anolis carolinensis	30.99	1.00e-113	403.00
IUUC-Aly-005696	Arabidopsis lyrata	51.80	0.00e+00	985.00
IUUC-Ath-006893	Arabidopsis thaliana	52.08	0.00e+00	996.00
IUUC-Ago-007722	Ashbya gossypii	30.77	6.00e-51	195.00
IUUC-Acl-008347	Aspergillus clavatus	30.32	1.00e-95	343.00
IUUC-Afl-008444	Aspergillus flavus	29.85	2.00e-87	317.00
IUUC-Afu-008837	Aspergillus fumigatus	29.51	2.00e-91	330.00
IUUC-Ani-009188	Aspergillus nidulans	30.44	3.00e-85	309.00
IUUC-Ang-009866	Aspergillus niger	29.01	5.00e-88	318.00
IUUC-Aor-010107	Aspergillus oryzae	30.08	3.00e-87	316.00
IUUC-Ate-010359	Aspergillus terreus	34.19	5.00e-78	285.00
IUUC-Ame-010664	Astyanax mexicanus	37.44	3.00e-78	286.00
IUUC-Bgr-012244	Blumeria graminis	34.98	3.00e-72	266.00
IUUC-Bta-013405	Bos taurus	32.63	9.00e-80	291.00
IUUC-Bci-013849	Botrytis cinerea	32.85	2.00e-75	277.00
IUUC-Bdi-014066	Brachypodium distachyon	45.69	0.00e+00	881.00
IUUC-Bol-015544	Brassica oleracea	50.40	0.00e+00	981.00
IUUC-Bra-017792	Brassica rapa	48.45	0.00e+00	944.00
IUUC-Cel-018148	Caenorhabditis elegans	31.68	9.00e-63	234.00
IUUC-Cja-019742	Callithrix jacchus	27.42	3.00e-63	236.00
IUUC-Cfa-020112	Canis familiaris	33.28	5.00e-86	312.00
IUUC-Cpo-022152	Cavia porcellus	29.73	4.00e-110	392.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	38.19	2.00e-68	253.00
IUUC-Csa-023504	Chlorocebus sabaeus	31.54	1.00e-82	300.00
IUUC-Cin-025276	Ciona intestinalis	39.61	2.00e-87	315.00
IUUC-Csv-026283	Ciona savignyi	35.41	2.00e-75	276.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	35.70	1.00e-81	297.00
IUUC-Cne-027079	Cryptococcus neoformans	26.88	7.00e-73	268.00
IUUC-Cme-027346	Cyanidioschyzon merolae	32.08	1.00e-55	211.00
IUUC-Dre-028073	Danio rerio	43.99	2.00e-74	274.00
IUUC-Dno-030038	Dasypus novemcinctus	32.42	4.00e-89	322.00
IUUC-Dor-031100	Dipodomys ordii	30.67	2.00e-79	290.00
IUUC-Dse-031310	Dothistroma septosporum	31.62	3.00e-92	332.00
IUUC-Dme-031991	Drosophila melanogaster	33.97	2.00e-74	273.00
IUUC-Ete-033082	Echinops telfairi	31.36	2.00e-64	240.00
IUUC-Eca-033471	Equus caballus	32.32	8.00e-86	311.00
IUUC-Eeu-034993	Erinaceus europaeus	40.44	2.00e-69	257.00
IUUC-Fca-035367	Felis catus	32.63	6.00e-87	315.00
IUUC-Fal-036973	Ficedula albicollis	35.70	6.00e-75	275.00
IUUC-Fox-037677	Fusarium oxysporum	35.43	6.00e-76	278.00
IUUC-Fso-038252	Fusarium solani	33.77	6.00e-78	285.00
IUUC-Gmo-039669	Gadus morhua	36.34	2.00e-87	316.00
IUUC-Ggr-039988	Gaeumannomyces graminis	34.47	8.00e-75	275.00
IUUC-Gga-040423	Gallus gallus	33.60	2.00e-81	296.00
IUUC-Gac-042134	Gasterosteus aculeatus	35.06	3.00e-87	316.00
IUUC-Gma-042929	Glycine max	56.23	0.00e+00	1206.00
IUUC-Ggo-044528	Gorilla gorilla	31.44	5.00e-83	302.00
IUUC-Hsa-046259	Homo sapiens	31.74	2.00e-82	300.00
IUUC-Hvu-047139	Hordeum vulgare	67.68	9.00e-124	436.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	32.74	5.00e-87	315.00
IUUC-Kpa-049169	Komagataella pastoris	33.41	2.00e-65	243.00
IUUC-Lch-050471	Latimeria chalumnae	43.57	1.00e-77	284.00
IUUC-Lpe-050800	Leersia perrieri	47.27	0.00e+00	917.00
IUUC-Loc-052320	Lepisosteus oculatus	25.84	7.00e-45	175.00
IUUC-Lma-053149	Leptosphaeria maculans	30.90	5.00e-77	281.00
IUUC-Laf-053810	Loxodonta africana	32.39	9.00e-84	304.00
IUUC-Mcc-055574	Macaca mulatta	31.85	3.00e-81	296.00
IUUC-Meu-055945	Macropus eugenii	29.68	5.00e-28	119.00
IUUC-Mor-057195	Magnaporthe oryzae	31.22	7.00e-92	331.00
IUUC-Mpo-057488	Magnaporthe poae	35.43	9.00e-76	278.00
IUUC-Mtr-057955	Medicago truncatula	55.06	0.00e+00	1192.00
IUUC-Mla-059027	Melampsora laricipopulina	33.27	4.00e-63	235.00
IUUC-Mga-060156	Meleagris gallopavo	33.76	7.00e-86	311.00
IUUC-Mvi-060398	Microbotryum violaceum	34.83	1.00e-70	261.00
IUUC-Mmr-061113	Microcebus murinus	33.07	2.00e-84	307.00
IUUC-Mdo-063001	Monodelphis domestica	32.27	1.00e-84	308.00
IUUC-Mmu-063180	Mus musculus	30.40	7.00e-106	378.00
IUUC-Mac-065551	Musa acuminata	45.42	3.00e-156	544.00
IUUC-Mpu-066525	Mustela putorius furo	32.05	9.00e-87	314.00
IUUC-Mlu-067877	Myotis lucifugus	31.11	2.00e-84	306.00
IUUC-Nfi-068418	Neosartorya fischeri	28.57	5.00e-88	318.00
IUUC-Ncr-068648	Neurospora crassa	35.75	3.00e-78	286.00
IUUC-Nle-069959	Nomascus leucogenys	31.74	2.00e-82	300.00
IUUC-Opr-070522	Ochotona princeps	35.62	1.00e-61	231.00
IUUC-Ont-072293	Oreochromis niloticus	31.40	7.00e-78	285.00
IUUC-Oan-073519	Ornithorhynchus anatinus	32.85	1.00e-81	297.00
IUUC-Ocu-074492	Oryctolagus cuniculus	31.49	7.00e-111	394.00
IUUC-Oba-075567	Oryza barthii	47.34	0.00e+00	940.00
IUUC-Obr-076332	Oryza brachyantha	43.73	0.00e+00	848.00
IUUC-Ogl-077348	Oryza glaberrima	47.67	0.00e+00	970.00
IUUC-Ogu-078779	Oryza glumaepatula	47.15	0.00e+00	937.00
IUUC-Oin-079738	Oryza indica	45.00	0.00e+00	884.00
IUUC-Olo-080701	Oryza longistaminata	45.17	0.00e+00	885.00
IUUC-Ome-081708	Oryza meridionalis	46.02	0.00e+00	882.00
IUUC-Oni-082251	Oryza nivara	46.88	0.00e+00	927.00
IUUC-Opu-083528	Oryza punctata	46.82	0.00e+00	922.00
IUUC-Oru-084293	Oryza rufipogon	47.01	0.00e+00	915.00
IUUC-Osa-085549	Oryza sativa	47.50	0.00e+00	967.00
IUUC-Ola-086793	Oryzias latipes	37.78	8.00e-80	291.00
IUUC-Olu-087786	Ostreococcus lucimarinus	33.19	2.00e-69	256.00
IUUC-Oga-089006	Otolemur garnettii	31.42	5.00e-79	288.00
IUUC-Oar-089597	Ovis aries	32.95	3.00e-84	306.00
IUUC-Ptr-091520	Pan troglodytes	35.21	2.00e-82	300.00
IUUC-Pan-092333	Papio anubis	31.80	1.00e-81	297.00
IUUC-Psi-094004	Pelodiscus sinensis	35.23	5.00e-73	268.00
IUUC-Pma-094128	Petromyzon marinus	36.12	3.00e-48	185.00
IUUC-Pno-094849	Phaeosphaeria nodorum	29.92	5.00e-75	275.00
IUUC-Ppa-095714	Physcomitrella patens	45.60	0.00e+00	662.00
IUUC-Pfo-096569	Poecilia formosa	33.66	1.00e-79	290.00
IUUC-Pab-097960	Pongo abelii	31.91	8.00e-83	301.00
IUUC-Pop-098921	Populus trichocarpa	58.75	0.00e+00	1234.00
IUUC-Pca-100509	Procavia capensis	31.54	1.00e-53	204.00
IUUC-Ppe-101730	Prunus persica	60.39	0.00e+00	1036.00
IUUC-Pva-102142	Pteropus vampyrus	32.66	9.00e-83	301.00
IUUC-Pgr-103446	Puccinia graminis	32.45	1.00e-49	190.00
IUUC-Ptt-103849	Puccinia triticina	30.60	2.00e-54	207.00
IUUC-Pte-104128	Pyrenophora teres	36.13	6.00e-80	291.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	35.14	7.00e-80	291.00
IUUC-Rno-104871	Rattus norvegicus	30.58	4.00e-114	405.00
IUUC-Sce-106236	Saccharomyces cerevisiae	27.98	4.00e-49	189.00
IUUC-Sha-106962	Sarcophilus harrisii	32.39	8.00e-85	308.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	40.33	1.00e-73	270.00
IUUC-Spo-108170	Schizosaccharomyces pombe	33.08	5.00e-62	232.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	32.65	5.00e-80	292.00
IUUC-Smo-109554	Selaginella moellendorffii	43.65	0.00e+00	630.00
IUUC-Sit-110479	Setaria italica	44.81	0.00e+00	690.00
IUUC-Sly-111752	Solanum lycopersicum	54.28	0.00e+00	1176.00
IUUC-Stu-112284	Solanum tuberosum	31.54	6.00e-30	125.00
IUUC-Sar-113304	Sorex araneus	32.55	1.00e-82	300.00
IUUC-Sbi-114196	Sorghum bicolor	43.11	0.00e+00	656.00
IUUC-Sre-115151	Sporisorium reilianum	30.27	5.00e-65	242.00
IUUC-Ssc-116104	Sus scrofa	32.31	2.00e-80	293.00
IUUC-Tgu-117438	Taeniopygia guttata	33.23	8.00e-85	308.00
IUUC-Tru-118553	Takifugu rubripes	32.54	4.00e-79	289.00
IUUC-Tsy-119056	Tarsius syrichta	30.02	9.00e-98	351.00
IUUC-Tni-119933	Tetraodon nigroviridis	33.05	4.00e-109	388.00
IUUC-Tca-121376	Theobroma cacao	59.72	0.00e+00	1332.00
IUUC-Tre-121972	Trichoderma reesei	32.16	7.00e-86	311.00
IUUC-Tvi-122342	Trichoderma virens	31.95	2.00e-88	320.00
IUUC-Tae-123898	Triticum aestivum	50.58	0.00e+00	804.00
IUUC-Tur-126735	Triticum urartu	42.43	2.00e-118	419.00
IUUC-Tme-126999	Tuber melanosporum	34.61	1.00e-73	271.00
IUUC-Tbe-127280	Tupaia belangeri	43.18	2.00e-27	117.00
IUUC-Ttr-129104	Tursiops truncatus	35.22	5.00e-80	292.00
IUUC-Uma-129562	Ustilago maydis	31.89	5.00e-63	236.00
IUUC-Vda-129862	Verticillium dahliae	36.76	5.00e-83	302.00
IUUC-Vpa-130819	Vicugna pacos	34.31	8.00e-41	161.00
IUUC-Xtr-132629	Xenopus tropicalis	31.12	2.00e-78	286.00
IUUC-Xma-134065	Xiphophorus maculatus	32.67	7.00e-81	295.00
IUUC-Yli-134633	Yarrowia lipolytica	32.87	3.00e-62	233.00
IUUC-Zma-135176	Zea mays	48.70	0.00e+00	858.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence