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Tag Content
iUUCD ID IUUC-Ncr-068909
Ensembl Protein ID ESA43241
UniProt Accession U9W2Z7; U9W2Z7_NEUCR
Genbank Protein ID ESA43241.1
Protein Name Polyadenylation factor subunit 2
Genbank Nucleotide ID CM002238
Gene Name NCU00037
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
NCU00037 ESA43240 ESA43240
NCU00037 ESA43241 ESA43241
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.90e-30 102.1 192 223
UBD/Beta-Prp 2.10e-49 167.3 111 349
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
    gHtd++++laf +dt +v++sdD t+kv+D+
   Q: 192 GHTDPIRDLAFspNDTKFVTASDDQTLKVFDF 223
    8***********666****************6 PP
   


   UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
    k++i++v ++p+++ l+t+s +g ++w+ t ++ ++ h+++++a+ +s+++++lv++ D++ik w + ++ v +++gh+d +++l+fsp++ k+v
   Q: 111 KHPINVVRWTPEGRRLLTASSSGEFTLWNGTGFNFETIMQAHDSAIRALVYSHSDDWLVSADHDGIIKYWQP-NFNNVESIRGHTDPIRDLAFSPNDTKFV 210
    68999******************************9999*******************************98.588899********************** PP
   S: 111 sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlq 210
    ++s+d+t++v+d g+ tl+gh + +hp+ l+vsGs+D v+lWd +tg++l+tl g h++ ++++ f++ + ++l++ ++d+t +++dl+
   Q: 211 TASDDQTLKVFDFAGGSTDM-TLTGHGWDAKSCDWHPSRGLIVSGSKDHLVKLWDPRTGRCLTTLHG-HKNTITKTLFERVQgNCLATSARDQTARVFDLR 309
    *******************9.*********************************************9.**********99777****************** PP
   S: 211 tgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
    + + l+gh++ ++ + + ++++l +g+sDgs++ +
   Q: 310 MMRDIALLRGHEKDISTLTWHpVHSNLLSTGGSDGSLFHY 349
    9999****************966888888889****9876 PP
   

Organism Neurospora crassa
Protein Sequence
(Fasta)
MAWTSPTTIQ SITLTLALLT LSSLLVHPFL LSTAIISHHH LWLFCPVTDY GASVVHYMRH 60
RQPRYRGSYA GEVERPSPSY IVDMLPPYAR VTNPADSVPS RHLHSSLNKI KHPINVVRWT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ncr-068909|E3,WD_repeat;UBD,Beta-Prp|Neurospora crassa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCCTGGA CATCACCGAC GACAATACAA TCGATCACGT TGACACTCGC CCTCCTCACT 60
TTATCCTCAC TTCTCGTTCA CCCGTTCCTG CTTAGCACCG CCATCATCTC ACATCACCAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ncr-068909|E3,WD_repeat;UBD,Beta-Prp|Neurospora crassa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005847--C:mRNA cleavage and polyadenylation specificity factor complex
GO:0000790--C:nuclear chromatin
GO:0031124--P:mRNA 3'-end processing

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001064 Aegilops tauschii 40.51 2.00e-90 325.00
IUUC-Aml-001363 Ailuropoda melanoleuca 44.05 1.00e-99 356.00
IUUC-Atr-003030 Amborella trichopoda 44.09 1.00e-97 348.00
IUUC-Apl-003409 Anas platyrhynchos 43.83 1.00e-97 350.00
IUUC-Aca-004694 Anolis carolinensis 44.05 4.00e-99 354.00
IUUC-Aly-006063 Arabidopsis lyrata 46.09 7.00e-102 362.00
IUUC-Ath-006583 Arabidopsis thaliana 46.63 3.00e-99 353.00
IUUC-Ago-007805 Ashbya gossypii 47.14 5.00e-98 349.00
IUUC-Acl-008075 Aspergillus clavatus 67.20 4.00e-168 582.00
IUUC-Afl-008582 Aspergillus flavus 65.57 2.00e-161 560.00
IUUC-Afu-008817 Aspergillus fumigatus 65.32 4.00e-145 506.00
IUUC-Ani-009391 Aspergillus nidulans 64.35 3.00e-157 546.00
IUUC-Ang-009750 Aspergillus niger 66.56 1.00e-123 434.00
IUUC-Aor-010085 Aspergillus oryzae 65.98 2.00e-166 577.00
IUUC-Ate-010397 Aspergillus terreus 66.28 2.00e-167 580.00
IUUC-Ame-010741 Astyanax mexicanus 49.57 1.00e-65 243.00
IUUC-Bgr-012169 Blumeria graminis 78.07 0.00e+00 629.00
IUUC-Bta-013265 Bos taurus 44.05 2.00e-99 355.00
IUUC-Bci-013762 Botrytis cinerea 76.30 0.00e+00 689.00
IUUC-Bdi-014849 Brachypodium distachyon 43.04 1.00e-98 352.00
IUUC-Bol-015325 Brassica oleracea 45.31 8.00e-103 365.00
IUUC-Bra-017064 Brassica rapa 46.35 1.00e-103 368.00
IUUC-Cel-018378 Caenorhabditis elegans 41.75 7.00e-93 333.00
IUUC-Cja-019547 Callithrix jacchus 44.05 1.00e-99 356.00
IUUC-Cfa-020031 Canis familiaris 44.05 2.00e-99 356.00
IUUC-Cpo-021554 Cavia porcellus 44.05 2.00e-99 355.00
IUUC-Cre-022830 Chlamydomonas reinhardtii 35.88 1.00e-60 225.00
IUUC-Csa-023146 Chlorocebus sabaeus 43.80 3.00e-99 355.00
IUUC-Cho-024679 Choloepus hoffmanni 45.25 2.00e-92 332.00
IUUC-Cin-025415 Ciona intestinalis 41.67 2.00e-88 318.00
IUUC-Csv-026003 Ciona savignyi 41.65 8.00e-88 315.00
IUUC-Cgl-026391 Colletotrichum gloeosporioides 80.66 0.00e+00 672.00
IUUC-Cne-026983 Cryptococcus neoformans 43.09 3.00e-88 317.00
IUUC-Cme-027147 Cyanidioschyzon merolae 44.62 8.00e-97 345.00
IUUC-Dre-028545 Danio rerio 43.29 8.00e-99 353.00
IUUC-Dno-029677 Dasypus novemcinctus 44.05 1.00e-99 356.00
IUUC-Dse-031371 Dothistroma septosporum 59.66 5.00e-147 512.00
IUUC-Dme-031663 Drosophila melanogaster 42.79 3.00e-97 347.00
IUUC-Ete-032511 Echinops telfairi 37.72 1.00e-75 276.00
IUUC-Eca-034152 Equus caballus 44.05 2.00e-99 355.00
IUUC-Eeu-034560 Erinaceus europaeus 34.46 2.00e-29 123.00
IUUC-Fca-035820 Felis catus 44.05 1.00e-99 356.00
IUUC-Fox-037958 Fusarium oxysporum 79.03 0.00e+00 691.00
IUUC-Fso-038162 Fusarium solani 79.03 0.00e+00 690.00
IUUC-Gmo-039708 Gadus morhua 44.05 3.00e-100 358.00
IUUC-Ggr-040031 Gaeumannomyces graminis 75.25 0.00e+00 638.00
IUUC-Gga-040963 Gallus gallus 43.80 2.00e-99 355.00
IUUC-Gac-041541 Gasterosteus aculeatus 43.32 4.00e-96 344.00
IUUC-Gma-044352 Glycine max 44.63 2.00e-103 367.00
IUUC-Ggo-045564 Gorilla gorilla 44.05 2.00e-99 356.00
IUUC-Hsa-045833 Homo sapiens 44.05 2.00e-99 355.00
IUUC-Hvu-047848 Hordeum vulgare 40.48 1.00e-70 258.00
IUUC-Itr-048083 Ictidomys tridecemlineatus 44.05 2.00e-99 355.00
IUUC-Kpa-049308 Komagataella pastoris 51.72 8.00e-114 401.00
IUUC-Lch-050525 Latimeria chalumnae 43.54 1.00e-97 350.00
IUUC-Lpe-051364 Leersia perrieri 38.73 1.00e-82 298.00
IUUC-Loc-052696 Lepisosteus oculatus 43.29 7.00e-98 350.00
IUUC-Lma-052951 Leptosphaeria maculans 69.21 2.00e-169 587.00
IUUC-Laf-053653 Loxodonta africana 44.05 5.00e-99 354.00
IUUC-Mcc-055797 Macaca mulatta 44.05 1.00e-99 356.00
IUUC-Meu-056331 Macropus eugenii 50.19 9.00e-84 303.00
IUUC-Mor-057168 Magnaporthe oryzae 77.47 0.00e+00 696.00
IUUC-Mpo-057510 Magnaporthe poae 74.54 1.00e-127 447.00
IUUC-Mtr-058032 Medicago truncatula 45.43 8.00e-104 369.00
IUUC-Mla-058852 Melampsora laricipopulina 46.34 8.00e-107 379.00
IUUC-Mga-059311 Meleagris gallopavo 44.05 2.00e-99 355.00
IUUC-Mvi-060544 Microbotryum violaceum 50.13 2.00e-110 391.00
IUUC-Mmr-061143 Microcebus murinus 44.05 2.00e-99 356.00
IUUC-Mdo-061977 Monodelphis domestica 44.05 2.00e-99 355.00
IUUC-Mmu-063922 Mus musculus 44.05 2.00e-99 355.00
IUUC-Mac-064961 Musa acuminata 43.80 2.00e-102 364.00
IUUC-Mpu-066079 Mustela putorius furo 46.15 1.00e-94 340.00
IUUC-Mlu-067247 Myotis lucifugus 44.05 8.00e-100 357.00
IUUC-Nfi-068255 Neosartorya fischeri 66.92 3.00e-153 533.00
IUUC-Nle-068994 Nomascus leucogenys 44.05 2.00e-99 356.00
IUUC-Opr-071079 Ochotona princeps 44.08 6.00e-100 357.00
IUUC-Ont-071971 Oreochromis niloticus 43.32 1.00e-97 349.00
IUUC-Oan-073135 Ornithorhynchus anatinus 45.78 5.00e-98 350.00
IUUC-Ocu-073982 Oryctolagus cuniculus 44.05 2.00e-99 355.00
IUUC-Oba-075297 Oryza barthii 39.24 2.00e-85 308.00
IUUC-Obr-076641 Oryza brachyantha 42.78 3.00e-99 353.00
IUUC-Ogl-077539 Oryza glaberrima 41.50 3.00e-72 264.00
IUUC-Ogu-078807 Oryza glumaepatula 39.24 2.00e-85 308.00
IUUC-Oin-079229 Oryza indica 42.78 3.00e-99 354.00
IUUC-Olo-080371 Oryza longistaminata 39.24 2.00e-85 308.00
IUUC-Ome-081149 Oryza meridionalis 38.99 1.00e-84 305.00
IUUC-Oni-082970 Oryza nivara 39.24 2.00e-85 308.00
IUUC-Opu-083415 Oryza punctata 38.99 6.00e-83 300.00
IUUC-Oru-085236 Oryza rufipogon 39.24 3.00e-85 308.00
IUUC-Ola-087421 Oryzias latipes 43.94 8.00e-99 352.00
IUUC-Olu-087821 Ostreococcus lucimarinus 41.88 5.00e-91 325.00
IUUC-Oga-088132 Otolemur garnettii 44.05 2.00e-99 355.00
IUUC-Oar-089513 Ovis aries 44.05 3.00e-99 355.00
IUUC-Ptr-090717 Pan troglodytes 44.05 2.00e-99 355.00
IUUC-Pan-092108 Papio anubis 44.05 2.00e-99 356.00
IUUC-Psi-093892 Pelodiscus sinensis 44.05 5.00e-99 354.00
IUUC-Pma-094561 Petromyzon marinus 44.58 2.00e-100 359.00
IUUC-Pno-094943 Phaeosphaeria nodorum 66.67 6.00e-174 602.00
IUUC-Ppa-095359 Physcomitrella patens 45.81 5.00e-104 370.00
IUUC-Pfo-096516 Poecilia formosa 43.69 2.00e-96 345.00
IUUC-Pab-097759 Pongo abelii 44.05 1.00e-99 356.00
IUUC-Pop-099553 Populus trichocarpa 44.05 7.00e-101 359.00
IUUC-Ppe-101957 Prunus persica 45.82 1.00e-104 372.00
IUUC-Pva-102918 Pteropus vampyrus 44.05 2.00e-99 355.00
IUUC-Pgr-103594 Puccinia graminis 49.47 5.00e-113 399.00
IUUC-Ptt-103879 Puccinia triticina 49.25 1.00e-98 352.00
IUUC-Pte-104419 Pyrenophora teres 68.13 1.00e-178 617.00
IUUC-Pyt-104718 Pyrenophora triticirepentis 69.12 6.00e-171 592.00
IUUC-Rno-105838 Rattus norvegicus 44.05 2.00e-99 355.00
IUUC-Sce-106331 Saccharomyces cerevisiae 46.45 3.00e-96 343.00
IUUC-Sha-107435 Sarcophilus harrisii 43.69 4.00e-99 354.00
IUUC-Sja-107796 Schizosaccharomyces japonicus 52.10 3.00e-122 430.00
IUUC-Spo-108163 Schizosaccharomyces pombe 53.10 9.00e-127 445.00
IUUC-Smo-108972 Selaginella moellendorffii 45.78 8.00e-104 368.00
IUUC-Sit-109729 Setaria italica 43.04 2.00e-98 351.00
IUUC-Sly-111679 Solanum lycopersicum 43.80 6.00e-103 366.00
IUUC-Sar-113157 Sorex araneus 44.05 3.00e-99 355.00
IUUC-Sbi-114853 Sorghum bicolor 42.82 6.00e-97 346.00
IUUC-Sre-115085 Sporisorium reilianum 48.77 6.00e-99 353.00
IUUC-Ssc-116286 Sus scrofa 43.43 2.00e-97 349.00
IUUC-Tgu-117219 Taeniopygia guttata 44.05 4.00e-99 355.00
IUUC-Tru-117550 Takifugu rubripes 44.05 1.00e-98 352.00
IUUC-Tsy-119294 Tarsius syrichta 44.30 1.00e-99 356.00
IUUC-Tni-120561 Tetraodon nigroviridis 43.83 2.00e-98 352.00
IUUC-Tca-121347 Theobroma cacao 45.32 3.00e-104 370.00
IUUC-Tre-122018 Trichoderma reesei 78.89 0.00e+00 682.00
IUUC-Tvi-122413 Trichoderma virens 78.65 0.00e+00 677.00
IUUC-Tae-123904 Triticum aestivum 42.03 6.00e-97 346.00
IUUC-Tme-127077 Tuber melanosporum 65.45 1.00e-152 531.00
IUUC-Tbe-127744 Tupaia belangeri 35.44 1.00e-53 203.00
IUUC-Ttr-128777 Tursiops truncatus 38.42 1.00e-74 273.00
IUUC-Uma-129568 Ustilago maydis 47.80 2.00e-95 341.00
IUUC-Vda-129834 Verticillium dahliae 75.69 0.00e+00 652.00
IUUC-Vvi-131360 Vitis vinifera 45.18 2.00e-103 368.00
IUUC-Xtr-132630 Xenopus tropicalis 44.30 6.00e-99 354.00
IUUC-Xma-133665 Xiphophorus maculatus 44.05 2.00e-98 352.00
IUUC-Yli-134556 Yarrowia lipolytica 46.98 5.00e-102 363.00
IUUC-Zma-135787 Zea mays 43.04 1.00e-98 352.00
Created Date 25-Jun-2017

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