iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095474

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545053

Gene Name

PHYPADRAFT_140226

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S164_107V6	PP1S164_107V6.1	PP1S164_107V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-07	30.7	69	110
E3 activity/RING/U-box	7.30e-07	29.9	66	121

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+f+  Cl++w    ++ s  + CP+C+
   Q: 69   CNICLELAQD-PVVTLCGHLFCWPCLYRW---LQMHSICQECPVCK 110
           99********.9999**************...666899*******6 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
            f C I lel +dPvv+ +G+ +   ++ +wl+      +cPv++ +++e++++P 
   Q: 66   SFDCNICLELAQDPVVTLCGHLFCWPCLYRWLQMHSIcqECPVCKGSVEEDKVIPL 121
           599*****************************77776779**************96 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MNEDTVSVRA SAGRTYGSSS AEAAHEESVM KHGEDGGSSR VQDDGDPHPV GGEETSAAGS 60
SDQGGSFDCN ICLELAQDPV VTLCGHLFCW PCLYRWLQMH SICQECPVCK GSVEEDKVIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACAATT CGATAACCCC CTGCCCCCCT CACCGCTCCC CCTCCTCCCA GCTTGCTCGC 60
TCTTGGGACT GTTCGGGTGC GTGTTCAGCT TTTCCATTCC TCCTTTCCTC CTTCCCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_140226

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	55.41	2.00e-43	168.00
IUUC-Aml-001875	Ailuropoda melanoleuca	58.11	2.00e-23	101.00
IUUC-Atr-002444	Amborella trichopoda	49.79	4.00e-46	177.00
IUUC-Apl-003744	Anas platyrhynchos	59.15	7.00e-23	98.20
IUUC-Aca-004254	Anolis carolinensis	57.14	6.00e-24	102.00
IUUC-Aly-005785	Arabidopsis lyrata	60.27	5.00e-43	166.00
IUUC-Ath-007401	Arabidopsis thaliana	60.26	1.00e-43	168.00
IUUC-Ame-011667	Astyanax mexicanus	62.71	2.00e-20	91.70
IUUC-Bta-012734	Bos taurus	58.11	2.00e-23	101.00
IUUC-Bdi-014183	Brachypodium distachyon	60.00	2.00e-45	174.00
IUUC-Bol-016132	Brassica oleracea	56.32	3.00e-48	183.00
IUUC-Bra-017631	Brassica rapa	48.68	1.00e-48	185.00
IUUC-Cel-018228	Caenorhabditis elegans	43.33	8.00e-27	112.00
IUUC-Cja-019136	Callithrix jacchus	58.11	1.00e-23	101.00
IUUC-Cfa-020308	Canis familiaris	58.11	2.00e-23	101.00
IUUC-Cpo-021347	Cavia porcellus	58.11	1.00e-23	101.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	56.18	6.00e-25	104.00
IUUC-Csa-023755	Chlorocebus sabaeus	58.11	7.00e-24	102.00
IUUC-Cin-025421	Ciona intestinalis	37.93	9.00e-08	51.60
IUUC-Cme-027164	Cyanidioschyzon merolae	36.24	2.00e-21	95.50
IUUC-Dre-028094	Danio rerio	56.94	1.00e-22	98.60
IUUC-Dno-029402	Dasypus novemcinctus	58.11	2.00e-23	101.00
IUUC-Dor-030373	Dipodomys ordii	58.11	2.00e-23	101.00
IUUC-Dme-031966	Drosophila melanogaster	46.90	1.00e-26	112.00
IUUC-Ete-032786	Echinops telfairi	58.11	9.00e-24	102.00
IUUC-Eca-034261	Equus caballus	58.11	2.00e-23	101.00
IUUC-Eeu-034614	Erinaceus europaeus	47.30	5.00e-16	76.60
IUUC-Fca-036049	Felis catus	58.11	2.00e-23	101.00
IUUC-Fal-037085	Ficedula albicollis	57.33	1.00e-23	101.00
IUUC-Gmo-039369	Gadus morhua	55.41	1.00e-22	98.20
IUUC-Gga-040514	Gallus gallus	58.11	2.00e-23	101.00
IUUC-Gac-041719	Gasterosteus aculeatus	58.82	3.00e-22	97.40
IUUC-Gma-043248	Glycine max	50.98	9.00e-50	189.00
IUUC-Ggo-044504	Gorilla gorilla	58.11	2.00e-23	101.00
IUUC-Hsa-045707	Homo sapiens	58.11	2.00e-23	101.00
IUUC-Hvu-047043	Hordeum vulgare	59.60	4.00e-44	170.00
IUUC-Itr-048343	Ictidomys tridecemlineatus	58.11	1.00e-23	102.00
IUUC-Kpa-049131	Komagataella pastoris	36.25	5.00e-09	55.50
IUUC-Lch-050658	Latimeria chalumnae	58.11	2.00e-23	101.00
IUUC-Lpe-050836	Leersia perrieri	59.33	7.00e-46	177.00
IUUC-Loc-052118	Lepisosteus oculatus	61.54	2.00e-22	97.80
IUUC-Laf-054438	Loxodonta africana	58.11	9.00e-24	102.00
IUUC-Mcc-054833	Macaca mulatta	41.56	4.00e-26	110.00
IUUC-Meu-055984	Macropus eugenii	51.95	1.00e-20	91.70
IUUC-Mtr-058130	Medicago truncatula	44.13	2.00e-43	167.00
IUUC-Mga-059554	Meleagris gallopavo	58.11	2.00e-23	101.00
IUUC-Mvi-060316	Microbotryum violaceum	49.12	2.00e-11	62.00
IUUC-Mmr-061662	Microcebus murinus	48.05	4.00e-15	73.60
IUUC-Mdo-062774	Monodelphis domestica	58.11	2.00e-23	101.00
IUUC-Mmu-063372	Mus musculus	58.11	5.00e-23	100.00
IUUC-Mac-065390	Musa acuminata	54.44	8.00e-48	182.00
IUUC-Mpu-066033	Mustela putorius furo	58.90	2.00e-24	107.00
IUUC-Mlu-067254	Myotis lucifugus	58.11	2.00e-23	101.00
IUUC-Nle-069850	Nomascus leucogenys	58.11	2.00e-23	101.00
IUUC-Opr-070197	Ochotona princeps	58.57	4.00e-22	97.10
IUUC-Ont-071950	Oreochromis niloticus	57.75	7.00e-23	99.40
IUUC-Oan-073480	Ornithorhynchus anatinus	58.11	2.00e-23	101.00
IUUC-Ocu-074208	Oryctolagus cuniculus	40.91	7.00e-25	105.00
IUUC-Oba-075461	Oryza barthii	53.61	8.00e-44	169.00
IUUC-Obr-076749	Oryza brachyantha	53.38	3.00e-40	157.00
IUUC-Ogl-077129	Oryza glaberrima	53.61	9.00e-44	169.00
IUUC-Ogu-078727	Oryza glumaepatula	53.61	9.00e-44	169.00
IUUC-Oin-079194	Oryza indica	53.61	9.00e-44	169.00
IUUC-Olo-080653	Oryza longistaminata	53.61	9.00e-44	169.00
IUUC-Ome-081636	Oryza meridionalis	53.61	6.00e-44	169.00
IUUC-Oni-082546	Oryza nivara	53.61	7.00e-44	169.00
IUUC-Opu-083228	Oryza punctata	54.00	2.00e-40	158.00
IUUC-Oru-084914	Oryza rufipogon	53.61	7.00e-44	169.00
IUUC-Osa-086216	Oryza sativa	53.61	9.00e-44	169.00
IUUC-Ola-086800	Oryzias latipes	61.90	9.00e-22	95.50
IUUC-Oga-088197	Otolemur garnettii	56.25	5.00e-24	103.00
IUUC-Oar-090284	Ovis aries	53.49	1.00e-24	105.00
IUUC-Ptr-091106	Pan troglodytes	58.11	2.00e-23	101.00
IUUC-Pan-092671	Papio anubis	58.11	7.00e-24	102.00
IUUC-Psi-093323	Pelodiscus sinensis	58.11	2.00e-23	101.00
IUUC-Pfo-096943	Poecilia formosa	60.32	3.00e-21	94.00
IUUC-Pab-097845	Pongo abelii	58.11	2.00e-23	101.00
IUUC-Pop-098889	Populus trichocarpa	56.89	3.00e-48	183.00
IUUC-Pca-100319	Procavia capensis	41.29	3.00e-26	110.00
IUUC-Ppe-101752	Prunus persica	55.17	7.00e-51	193.00
IUUC-Pva-102298	Pteropus vampyrus	58.11	2.00e-23	101.00
IUUC-Rno-105293	Rattus norvegicus	58.11	7.00e-24	102.00
IUUC-Sha-107361	Sarcophilus harrisii	58.11	7.00e-24	102.00
IUUC-Smo-109663	Selaginella moellendorffii	62.02	6.00e-39	151.00
IUUC-Sit-109934	Setaria italica	59.33	2.00e-44	171.00
IUUC-Sly-111255	Solanum lycopersicum	54.29	2.00e-46	178.00
IUUC-Stu-112117	Solanum tuberosum	63.33	1.00e-43	168.00
IUUC-Sar-113669	Sorex araneus	55.32	1.00e-11	60.10
IUUC-Sbi-114116	Sorghum bicolor	58.94	2.00e-43	167.00
IUUC-Ssc-116228	Sus scrofa	58.11	2.00e-23	101.00
IUUC-Tgu-116886	Taeniopygia guttata	57.33	1.00e-23	101.00
IUUC-Tsy-119615	Tarsius syrichta	48.65	1.00e-26	110.00
IUUC-Tni-120909	Tetraodon nigroviridis	55.56	5.00e-25	106.00
IUUC-Tca-121264	Theobroma cacao	59.35	8.00e-50	189.00
IUUC-Tae-124257	Triticum aestivum	58.94	2.00e-43	168.00
IUUC-Tur-126443	Triticum urartu	58.94	1.00e-43	168.00
IUUC-Tbe-127360	Tupaia belangeri	58.11	1.00e-23	101.00
IUUC-Ttr-129044	Tursiops truncatus	58.11	2.00e-23	101.00
IUUC-Vpa-130365	Vicugna pacos	56.76	1.00e-22	98.60
IUUC-Vvi-131725	Vitis vinifera	57.14	7.00e-52	196.00
IUUC-Xtr-131916	Xenopus tropicalis	55.84	5.00e-24	102.00
IUUC-Xma-133333	Xiphophorus maculatus	59.38	3.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence