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Tag Content
UUCD2 ID IUUC-Pca-100275
UUCD1 version UUC-PrC-00239
Ensembl Protein ID ENSPCAP00000012463.1
UniProt Accession Q864D4; Q864D4_PROCA
Genbank Protein ID AAP12386.1
Protein Name Recombination activating protein 1
Genbank Nucleotide ID AY239192
Gene Name RAG-1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000013367.1 ENSPCAT00000013338.1 ENSPCAP00000012463.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 3.20e-06 27.3 11 52
E3 activity/RING/U-box 6.70e-06 25.8 7 71
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
    C+iCl+ + d p++ CgH f++ Cl w ++ +rCP+Cr
   Q: 11 CLICLNYLTD-PVTICCGHNFCRACLcLSW----EKAESPARCPICR 52
    **********.999****************....77999999****8 PP
   


   E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl....asggk..tcPvtrqplteedlvPnltlrrliq 66
    +e++C I l+ +dPv++++G+ + r+++ +l a+ + cP++r++ ++++++ n +++l++
   Q: 7 KELNCLICLNYLTDPVTICCGHNFCRACL--CLswekAE--SpaRCPICRETSEQTEFKTNVLIKNLVS 71
    6899************************9..66332333..3569********************9986 PP
   

Organism Procavia capensis
Protein Sequence
(Fasta)
MASVFEKELN CLICLNYLTD PVTICCGHNF CRACLCLSWE KAESPARCPI CRETSEQTEF 60
KTNVLIKNLV SLARQASLRQ FLSSEEQMCE AHKETKKMFC EENKSLLCLL CSSSEEHEAH 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pca-100275|E3,RING;E3,U-box|Procavia capensis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCGTCAG TCTTTGAGAA GGAACTCAAC TGCTTAATCT GCTTGAACTA CCTAACAGAC 60
CCTGTCACCA TATGCTGTGG ACACAACTTC TGTAGGGCCT GTCTCTGCCT TTCCTGGGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pca-100275|E3,RING;E3,U-box|Procavia capensis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0539--Nucleus

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Bta-012834 Bos taurus 39.64 5.00e-84 304.00
IUUC-Cja-019010 Callithrix jacchus 52.34 8.00e-125 440.00
IUUC-Csa-024131 Chlorocebus sabaeus 58.09 8.00e-148 516.00
IUUC-Cho-024585 Choloepus hoffmanni 60.59 6.00e-156 543.00
IUUC-Dno-029845 Dasypus novemcinctus 59.91 2.00e-147 515.00
IUUC-Eca-033627 Equus caballus 56.63 6.00e-142 496.00
IUUC-Gma-042739 Glycine max 40.68 1.00e-08 53.50
IUUC-Hsa-046700 Homo sapiens 58.65 2.00e-146 511.00
IUUC-Laf-053917 Loxodonta africana 73.26 0.00e+00 631.00
IUUC-Mcc-054788 Macaca mulatta 57.30 4.00e-142 497.00
IUUC-Mtr-057657 Medicago truncatula 42.37 5.00e-09 55.10
IUUC-Mmr-061646 Microcebus murinus 50.11 3.00e-114 404.00
IUUC-Nle-069150 Nomascus leucogenys 56.63 2.00e-134 471.00
IUUC-Opr-070996 Ochotona princeps 43.67 1.00e-92 333.00
IUUC-Ocu-074806 Oryctolagus cuniculus 53.76 1.00e-127 449.00
IUUC-Oga-088482 Otolemur garnettii 56.56 1.00e-135 476.00
IUUC-Oar-090163 Ovis aries 45.37 2.00e-98 352.00
IUUC-Ptr-090899 Pan troglodytes 59.10 1.00e-147 515.00
IUUC-Pab-098214 Pongo abelii 59.10 5.00e-148 516.00
IUUC-Ssc-115481 Sus scrofa 51.00 5.00e-119 421.00
Created Date 25-Jun-2017

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