iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g025620	Sb10g025620.1	Sb10g025620.1
Sb10g025620	Sb10g025620.2	Sb10g025620.2
Sb10g025620	Sb10g025620.3	Sb10g025620.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-43	144.6	487	525
UBD/Beta-Prp	5.50e-68	230.1	333	648

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ tg +++
   Q: 487  GHLSDVDCVQWhvNCNYIATGSSDKTVRLWDVQTGECIR 525
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........................lrsl.sgheaevtavkfspdgkilvtgseD 73
           ++h+   ++c  +s d+sl++ g+ d+++kvwd+++                                +l +gh+++v++  fsp g++l+++s+D
   Q: 333  NTHNG--LNCSSISHDGSLVVGGFSDSSVKVWDMSKIGQptkmsssqsengssqgeristldegkrTYTLfQGHSGPVYSAAFSPFGDFLLSSSSD 426
           44444..56677788*********************88899999999999999999999999999955666999999******************* PP
   S: 74   rtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
            ti++w+ + +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w +++ q l+ + +gh + v cv++h ++n++++Gs D+tvrlWd++tg
   Q: 427  STIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDKIQPLR-IMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQTG 521
           *********************************************************.************************************** PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn. 264
           +++r + g h ++v sl+++++g++++sg++dgt+ +wdl+tg+cv  l gh++ v+ ++fs ++ +l+sgs+D ++++Wd+ s++ + +++ ++ 
   Q: 522  ECIRMFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMIWDLSTGRCVSPLLGHSSCVWTLAFSCEGALLASGSADCTVKLWDVASSTKTLKTEDTKg 616
           *******9.*****************************************************************************9999999998 PP
   S: 265  .............ssvisvavlsfgdnvlvlg 283
                        ++ ++v  l+f++++l+ +
   Q: 617  ssanrlrllkalpTKATPVYSLRFSRRNLLFA 648
           88888888888887777777788887776655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEDEEMEKKV QQYLQRKGFR LTELALQEER NRLSTSAISD VALARSDNDP ARYHDGYSRL 60
RTWAYSSLDQ YKHELLRVLY PVFIHSFMDL VAEGHMQEAR SFFHTFREDH EVMHSRDLQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCACTCCT ACGCCTCGCC GGCGAGCCGC CTTCCGCCCT TTCGCTTCCG CCATCTTCTG 60
CGCGCTTTGG ATCATCGTCC TCTCCTCTCG CTTGAGATCC AGGCCCCTAA ACCCTAGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	74.34	0.00e+00	847.00
IUUC-Aml-001607	Ailuropoda melanoleuca	45.89	1.00e-89	323.00
IUUC-Atr-003136	Amborella trichopoda	69.77	0.00e+00	911.00
IUUC-Apl-004193	Anas platyrhynchos	46.97	3.00e-90	325.00
IUUC-Aca-004522	Anolis carolinensis	37.56	6.00e-116	410.00
IUUC-Aly-006476	Arabidopsis lyrata	66.82	0.00e+00	861.00
IUUC-Ath-006587	Arabidopsis thaliana	67.92	0.00e+00	875.00
IUUC-Ago-007736	Ashbya gossypii	32.42	5.00e-105	374.00
IUUC-Acl-008092	Aspergillus clavatus	30.31	3.00e-88	318.00
IUUC-Afl-008659	Aspergillus flavus	29.94	4.00e-88	318.00
IUUC-Afu-008902	Aspergillus fumigatus	29.73	3.00e-85	308.00
IUUC-Ani-009462	Aspergillus nidulans	30.31	1.00e-74	273.00
IUUC-Aor-010083	Aspergillus oryzae	30.01	4.00e-88	318.00
IUUC-Ate-010271	Aspergillus terreus	30.06	7.00e-85	307.00
IUUC-Ame-010721	Astyanax mexicanus	44.19	7.00e-88	317.00
IUUC-Bgr-012257	Blumeria graminis	31.55	4.00e-80	291.00
IUUC-Bta-013539	Bos taurus	43.39	3.00e-89	322.00
IUUC-Bci-013737	Botrytis cinerea	28.89	8.00e-83	300.00
IUUC-Bdi-015041	Brachypodium distachyon	89.91	0.00e+00	1025.00
IUUC-Bol-015483	Brassica oleracea	67.81	0.00e+00	880.00
IUUC-Bra-017147	Brassica rapa	67.66	0.00e+00	879.00
IUUC-Cel-018451	Caenorhabditis elegans	28.64	5.00e-57	214.00
IUUC-Cja-018881	Callithrix jacchus	43.65	2.00e-89	323.00
IUUC-Cfa-020056	Canis familiaris	43.65	1.00e-89	323.00
IUUC-Cpo-021454	Cavia porcellus	37.56	2.00e-113	402.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	40.48	2.00e-61	229.00
IUUC-Csa-023045	Chlorocebus sabaeus	43.65	3.00e-89	322.00
IUUC-Cho-024284	Choloepus hoffmanni	47.31	2.00e-74	272.00
IUUC-Cin-025457	Ciona intestinalis	52.40	5.00e-72	263.00
IUUC-Csv-025882	Ciona savignyi	43.44	1.00e-74	273.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	27.30	1.00e-71	263.00
IUUC-Cne-026876	Cryptococcus neoformans	30.78	8.00e-74	271.00
IUUC-Cme-027302	Cyanidioschyzon merolae	35.87	3.00e-110	391.00
IUUC-Dre-027980	Danio rerio	45.82	4.00e-89	321.00
IUUC-Dno-028863	Dasypus novemcinctus	44.30	7.00e-90	324.00
IUUC-Dor-030561	Dipodomys ordii	43.65	2.00e-89	323.00
IUUC-Dse-031547	Dothistroma septosporum	31.35	2.00e-88	319.00
IUUC-Dme-031917	Drosophila melanogaster	44.32	2.00e-76	279.00
IUUC-Ete-032712	Echinops telfairi	40.27	4.00e-68	251.00
IUUC-Eca-033927	Equus caballus	37.32	8.00e-114	403.00
IUUC-Eeu-034449	Erinaceus europaeus	45.10	8.00e-85	307.00
IUUC-Fca-036325	Felis catus	43.65	1.00e-89	323.00
IUUC-Fal-036604	Ficedula albicollis	43.95	2.00e-89	323.00
IUUC-Fox-038049	Fusarium oxysporum	25.82	1.00e-61	230.00
IUUC-Fso-038302	Fusarium solani	28.28	3.00e-70	259.00
IUUC-Gmo-038832	Gadus morhua	43.91	9.00e-88	317.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.58	6.00e-74	271.00
IUUC-Gga-041147	Gallus gallus	37.64	3.00e-114	405.00
IUUC-Gac-041373	Gasterosteus aculeatus	43.34	6.00e-86	311.00
IUUC-Gma-043230	Glycine max	71.06	0.00e+00	935.00
IUUC-Ggo-044568	Gorilla gorilla	38.13	1.00e-69	256.00
IUUC-Hsa-045971	Homo sapiens	43.65	1.00e-89	323.00
IUUC-Hvu-047695	Hordeum vulgare	87.76	0.00e+00	758.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	43.39	2.00e-89	322.00
IUUC-Kpa-049402	Komagataella pastoris	35.76	2.00e-111	395.00
IUUC-Lch-049526	Latimeria chalumnae	43.23	8.00e-80	290.00
IUUC-Lpe-051560	Leersia perrieri	84.50	0.00e+00	1043.00
IUUC-Loc-052882	Lepisosteus oculatus	44.76	6.00e-88	317.00
IUUC-Lma-053212	Leptosphaeria maculans	29.87	6.00e-72	264.00
IUUC-Laf-053859	Loxodonta africana	43.65	2.00e-89	322.00
IUUC-Mcc-054957	Macaca mulatta	43.65	6.00e-89	320.00
IUUC-Meu-056182	Macropus eugenii	40.39	7.00e-68	250.00
IUUC-Mor-057024	Magnaporthe oryzae	29.32	6.00e-73	268.00
IUUC-Mpo-057520	Magnaporthe poae	29.97	5.00e-71	261.00
IUUC-Mtr-058754	Medicago truncatula	70.80	0.00e+00	964.00
IUUC-Mla-058881	Melampsora laricipopulina	39.45	2.00e-71	263.00
IUUC-Mga-059776	Meleagris gallopavo	37.64	3.00e-115	408.00
IUUC-Mvi-060208	Microbotryum violaceum	31.85	3.00e-89	322.00
IUUC-Mmr-061783	Microcebus murinus	43.65	6.00e-89	320.00
IUUC-Mdo-062856	Monodelphis domestica	43.92	8.00e-90	324.00
IUUC-Mmu-064218	Mus musculus	43.65	2.00e-89	323.00
IUUC-Mac-064886	Musa acuminata	71.62	2.00e-149	522.00
IUUC-Mpu-065735	Mustela putorius furo	43.65	1.00e-89	323.00
IUUC-Mlu-067544	Myotis lucifugus	43.54	4.00e-88	318.00
IUUC-Nfi-068502	Neosartorya fischeri	29.86	9.00e-88	317.00
IUUC-Ncr-068891	Neurospora crassa	28.66	7.00e-70	258.00
IUUC-Nle-069389	Nomascus leucogenys	43.65	1.00e-89	323.00
IUUC-Opr-070243	Ochotona princeps	40.27	1.00e-68	253.00
IUUC-Ont-071455	Oreochromis niloticus	45.33	1.00e-89	323.00
IUUC-Oan-073181	Ornithorhynchus anatinus	44.18	8.00e-90	323.00
IUUC-Ocu-073758	Oryctolagus cuniculus	37.48	2.00e-113	402.00
IUUC-Oba-075739	Oryza barthii	80.93	0.00e+00	970.00
IUUC-Obr-076111	Oryza brachyantha	89.04	0.00e+00	1097.00
IUUC-Ogl-077914	Oryza glaberrima	86.30	0.00e+00	1072.00
IUUC-Ogu-078057	Oryza glumaepatula	76.93	0.00e+00	918.00
IUUC-Oin-079473	Oryza indica	87.91	0.00e+00	1084.00
IUUC-Olo-080557	Oryza longistaminata	65.70	0.00e+00	811.00
IUUC-Ome-081831	Oryza meridionalis	77.05	0.00e+00	917.00
IUUC-Oni-082441	Oryza nivara	78.45	0.00e+00	923.00
IUUC-Opu-083239	Oryza punctata	74.89	0.00e+00	910.00
IUUC-Oru-085131	Oryza rufipogon	78.45	0.00e+00	923.00
IUUC-Osa-086189	Oryza sativa	87.91	0.00e+00	1082.00
IUUC-Ola-086574	Oryzias latipes	46.40	2.00e-89	323.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.04	4.00e-118	417.00
IUUC-Oga-088827	Otolemur garnettii	43.65	1.00e-89	323.00
IUUC-Oar-089648	Ovis aries	43.39	3.00e-89	322.00
IUUC-Ptr-091195	Pan troglodytes	43.65	2.00e-89	322.00
IUUC-Pan-091978	Papio anubis	43.65	1.00e-89	323.00
IUUC-Psi-093598	Pelodiscus sinensis	37.56	7.00e-105	373.00
IUUC-Pma-094593	Petromyzon marinus	39.17	1.00e-56	213.00
IUUC-Pno-094823	Phaeosphaeria nodorum	32.18	6.00e-79	287.00
IUUC-Ppa-095455	Physcomitrella patens	57.66	0.00e+00	745.00
IUUC-Pfo-097120	Poecilia formosa	46.44	1.00e-89	323.00
IUUC-Pab-098771	Pongo abelii	43.65	1.00e-89	323.00
IUUC-Pop-099542	Populus trichocarpa	69.07	0.00e+00	941.00
IUUC-Pca-100727	Procavia capensis	40.82	9.00e-69	253.00
IUUC-Ppe-101686	Prunus persica	72.93	0.00e+00	968.00
IUUC-Pva-102414	Pteropus vampyrus	37.04	7.00e-66	244.00
IUUC-Pgr-103603	Puccinia graminis	42.42	2.00e-66	246.00
IUUC-Ptt-103995	Puccinia triticina	42.05	3.00e-62	233.00
IUUC-Pte-104359	Pyrenophora teres	30.62	1.00e-79	290.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.61	1.00e-77	283.00
IUUC-Rno-105064	Rattus norvegicus	45.89	3.00e-89	322.00
IUUC-Sce-106186	Saccharomyces cerevisiae	35.09	3.00e-99	355.00
IUUC-Sha-106582	Sarcophilus harrisii	38.76	5.00e-113	400.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	35.19	2.00e-110	392.00
IUUC-Spo-108142	Schizosaccharomyces pombe	34.91	4.00e-111	394.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	29.15	3.00e-79	288.00
IUUC-Smo-109097	Selaginella moellendorffii	58.80	0.00e+00	707.00
IUUC-Sit-109804	Setaria italica	94.13	0.00e+00	1186.00
IUUC-Sly-111693	Solanum lycopersicum	68.01	0.00e+00	912.00
IUUC-Sar-113381	Sorex araneus	38.13	9.00e-71	260.00
IUUC-Sre-114945	Sporisorium reilianum	42.94	1.00e-71	263.00
IUUC-Ssc-115582	Sus scrofa	44.09	6.00e-88	317.00
IUUC-Tgu-116899	Taeniopygia guttata	43.65	4.00e-90	325.00
IUUC-Tru-118011	Takifugu rubripes	44.48	1.00e-87	316.00
IUUC-Tsy-119622	Tarsius syrichta	33.24	1.00e-44	173.00
IUUC-Tni-120598	Tetraodon nigroviridis	44.48	1.00e-87	316.00
IUUC-Tca-121247	Theobroma cacao	73.54	0.00e+00	964.00
IUUC-Tre-121949	Trichoderma reesei	27.85	2.00e-76	279.00
IUUC-Tvi-122626	Trichoderma virens	31.22	9.00e-51	194.00
IUUC-Tae-125816	Triticum aestivum	86.73	0.00e+00	1009.00
IUUC-Tur-126316	Triticum urartu	77.56	0.00e+00	956.00
IUUC-Tme-126904	Tuber melanosporum	34.64	3.00e-109	388.00
IUUC-Tbe-127254	Tupaia belangeri	38.81	1.00e-67	250.00
IUUC-Ttr-128544	Tursiops truncatus	43.92	1.00e-89	323.00
IUUC-Uma-129379	Ustilago maydis	43.54	1.00e-69	257.00
IUUC-Vda-129761	Verticillium dahliae	26.49	1.00e-66	246.00
IUUC-Vpa-130485	Vicugna pacos	43.65	2.00e-89	323.00
IUUC-Vvi-131171	Vitis vinifera	73.01	0.00e+00	992.00
IUUC-Xtr-132241	Xenopus tropicalis	36.95	4.00e-66	244.00
IUUC-Xma-133583	Xiphophorus maculatus	46.84	2.00e-89	322.00
IUUC-Yli-134446	Yarrowia lipolytica	39.31	2.00e-124	439.00
IUUC-Zma-135722	Zea mays	96.06	0.00e+00	1222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence