iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027657

Ensembl Protein ID

ENSDARP00000065205.5

UniProt Accession

F1QHZ6; F1QHZ6_DANRE

Genbank Protein ID

ENSDARP00000065205

Protein Name

WD repeat domain 78

Genbank Nucleotide ID

BX088595

Gene Name

wdr78

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000044400.5	ENSDART00000065206.5	ENSDARP00000065205.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-11	45.0	479	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           +++vt+l+f  s+ + l++G +Dgti ++++ t  
   Q: 479  ESGVTALDFsaSNaNQLAVGMYDGTIAIYNVQTSE 513
           578********999****************98865 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSNTTVTQKR RTLKVAKSSK TLNVSSGVFR PNQSTTKSIN PLFSGKSFGS TGDSKVVDKI 60
SAQTPKHTAM VVDENGQDVT PHPLYNPDPG VLQSKQGKVF TALDTSLTTM TEFPSIAFQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATGAAACA CCATTACCGA CTTGTCCTGC ATAACTTCTA GCCATCCACC CATCTGTCCT 60
TACCGCTTTT AAAAGTCTAA AACATGTCTA ACACAACAGT CACACAGAAG AGACGCACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	43.60	7.00e-169	588.00
IUUC-Apl-004037	Anas platyrhynchos	45.60	0.00e+00	642.00
IUUC-Aca-004686	Anolis carolinensis	45.92	0.00e+00	642.00
IUUC-Ame-010641	Astyanax mexicanus	56.19	0.00e+00	786.00
IUUC-Bta-012779	Bos taurus	43.95	7.00e-175	607.00
IUUC-Cja-019217	Callithrix jacchus	45.04	0.00e+00	628.00
IUUC-Cfa-020613	Canis familiaris	43.58	9.00e-171	593.00
IUUC-Cpo-022374	Cavia porcellus	45.99	6.00e-180	624.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	40.31	5.00e-69	256.00
IUUC-Csa-023471	Chlorocebus sabaeus	45.31	1.00e-172	600.00
IUUC-Cho-024485	Choloepus hoffmanni	38.58	7.00e-139	488.00
IUUC-Cin-025295	Ciona intestinalis	42.38	1.00e-165	577.00
IUUC-Csv-025888	Ciona savignyi	43.99	3.00e-168	585.00
IUUC-Dno-029422	Dasypus novemcinctus	54.08	7.00e-120	424.00
IUUC-Eca-033418	Equus caballus	44.44	1.00e-164	573.00
IUUC-Eeu-035088	Erinaceus europaeus	50.79	3.00e-51	197.00
IUUC-Fca-035471	Felis catus	43.78	2.00e-166	579.00
IUUC-Fal-036908	Ficedula albicollis	41.94	1.00e-133	470.00
IUUC-Gmo-038672	Gadus morhua	44.93	5.00e-163	568.00
IUUC-Gga-040422	Gallus gallus	40.49	3.00e-172	598.00
IUUC-Gac-042448	Gasterosteus aculeatus	45.48	1.00e-174	607.00
IUUC-Ggo-045567	Gorilla gorilla	44.17	4.00e-165	575.00
IUUC-Hsa-046857	Homo sapiens	45.95	2.00e-175	609.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	49.89	4.00e-130	457.00
IUUC-Lch-050496	Latimeria chalumnae	49.30	0.00e+00	721.00
IUUC-Loc-052759	Lepisosteus oculatus	56.02	0.00e+00	782.00
IUUC-Laf-053515	Loxodonta africana	44.72	4.00e-179	621.00
IUUC-Mcc-054741	Macaca mulatta	45.68	4.00e-176	611.00
IUUC-Meu-056698	Macropus eugenii	53.38	2.00e-91	330.00
IUUC-Mga-059689	Meleagris gallopavo	43.63	2.00e-171	595.00
IUUC-Mmr-061641	Microcebus murinus	43.50	1.00e-127	450.00
IUUC-Mdo-061968	Monodelphis domestica	44.95	7.00e-175	607.00
IUUC-Mmu-063908	Mus musculus	44.40	3.00e-165	575.00
IUUC-Mpu-065957	Mustela putorius furo	43.58	3.00e-165	575.00
IUUC-Mlu-067454	Myotis lucifugus	42.78	7.00e-170	591.00
IUUC-Nle-069312	Nomascus leucogenys	46.19	2.00e-179	623.00
IUUC-Opr-070363	Ochotona princeps	46.94	2.00e-112	400.00
IUUC-Ont-072322	Oreochromis niloticus	42.82	1.00e-165	576.00
IUUC-Oan-073666	Ornithorhynchus anatinus	45.06	2.00e-178	619.00
IUUC-Ocu-074719	Oryctolagus cuniculus	43.86	0.00e+00	637.00
IUUC-Ola-087351	Oryzias latipes	49.52	4.00e-83	301.00
IUUC-Olu-087835	Ostreococcus lucimarinus	30.99	3.00e-41	162.00
IUUC-Oga-088476	Otolemur garnettii	44.76	3.00e-167	582.00
IUUC-Oar-089261	Ovis aries	43.00	4.00e-169	588.00
IUUC-Pan-091774	Papio anubis	44.95	3.00e-175	608.00
IUUC-Psi-093526	Pelodiscus sinensis	56.22	4.00e-129	456.00
IUUC-Ppa-095355	Physcomitrella patens	49.02	3.00e-41	162.00
IUUC-Pfo-096510	Poecilia formosa	38.14	9.00e-137	481.00
IUUC-Pab-098218	Pongo abelii	45.49	8.00e-175	607.00
IUUC-Pva-102551	Pteropus vampyrus	47.20	3.00e-102	366.00
IUUC-Rno-105674	Rattus norvegicus	43.46	2.00e-170	592.00
IUUC-Sha-107552	Sarcophilus harrisii	45.19	0.00e+00	628.00
IUUC-Smo-109353	Selaginella moellendorffii	43.62	2.00e-67	249.00
IUUC-Sar-113136	Sorex araneus	40.97	1.00e-141	497.00
IUUC-Ssc-116203	Sus scrofa	45.29	2.00e-153	535.00
IUUC-Tgu-117141	Taeniopygia guttata	40.23	4.00e-131	462.00
IUUC-Tni-119670	Tetraodon nigroviridis	40.45	5.00e-117	415.00
IUUC-Tbe-127913	Tupaia belangeri	45.58	2.00e-113	403.00
IUUC-Ttr-128515	Tursiops truncatus	42.86	1.00e-156	547.00
IUUC-Vpa-130560	Vicugna pacos	46.07	1.00e-99	358.00
IUUC-Xtr-131755	Xenopus tropicalis	46.93	0.00e+00	697.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence