iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000058733.1	ENSRNOT00000079981.1	ENSRNOP00000072909.1
ENSRNOG00000058733.1	ENSRNOT00000079524.1	ENSRNOP00000070164.1
ENSRNOG00000058733.1	ENSRNOT00000085650.1	ENSRNOP00000071134.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	5.90e-12	45.7	1027	1084

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 4    ekvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvk.elegkrGlfPenFvekl 62
           ++v+++yd +a nddeLt+ +G+v+ v    e+d++W+ g      +++G+fP  Fv+ l
   Q: 1027 RRVKTIYDCQADNDDELTFIEGEVIIVT--GEEDQEWWIGHIeGQPERKGVFPVSFVHIL 1084
           789**********************996..999*******763455789*******9866 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

LLQHALDQDR TALQKVKKSV KAIYNSGQDH VQNEENYAQV LDKFGSNFLS RDNPDLGTAF 60
VKFSTLTKEL STLLKNLLQG LSHNVIFTLD SLLKGDLKGV KGDLKKPFDK AWKDYETKFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTACTCCAGC ACGTGAGAGG CTAAGGCAGG GTGGATTCAG CTTAATCATC AGTTTCATCT 60
TTGATTTTAA TAAACTGGGA ATTTTTTTAA TTAAAGAAAT TATCAACTTC AAAAGCACTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR027267--AH/BAR-dom
IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001164--ArfGAP
IPR011993--PH_dom-like
IPR001849--PH_domain
IPR001452--SH3_domain

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50115--ARFGAP
PS50003--PH_DOMAIN
PS50002--SH3

Pfam

PF12796--Ank_2
PF01412--ArfGap
PF00169--PH
PF00018--SH3_1

PRINTS

PR00405--REVINTRACTNG

SMART

SM00248--ANK
SM00105--ArfGap
SM00233--PH
SM00326--SH3

Gene Ontology

GO:0031253--C:cell projection membrane
GO:0043197--C:dendritic spine
GO:0002102--C:podosome
GO:0005096--F:GTPase activator activity
GO:0046872--F:metal ion binding
GO:0005547--F:phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005546--F:phosphatidylinositol-4,5-bisphosphate binding
GO:0001786--F:phosphatidylserine binding
GO:0060271--P:cilium assembly
GO:0061000--P:negative regulation of dendritic spine development
GO:1903527--P:positive regulation of membrane tubulation
GO:0071803--P:positive regulation of podosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001715	Ailuropoda melanoleuca	94.38	0.00e+00	1687.00
IUUC-Apl-004017	Anas platyrhynchos	88.65	0.00e+00	1593.00
IUUC-Aca-004813	Anolis carolinensis	86.24	0.00e+00	1677.00
IUUC-Ago-007990	Ashbya gossypii	32.00	3.00e-09	56.60
IUUC-Afl-008446	Aspergillus flavus	32.79	8.00e-07	48.90
IUUC-Afu-009002	Aspergillus fumigatus	34.94	4.00e-08	53.10
IUUC-Ani-009433	Aspergillus nidulans	37.63	7.00e-17	82.40
IUUC-Ang-009739	Aspergillus niger	36.56	8.00e-16	79.00
IUUC-Aor-010082	Aspergillus oryzae	38.30	8.00e-18	85.50
IUUC-Ame-011148	Astyanax mexicanus	65.01	0.00e+00	1262.00
IUUC-Bgr-012127	Blumeria graminis	31.20	9.00e-13	68.60
IUUC-Bta-012845	Bos taurus	93.09	0.00e+00	1702.00
IUUC-Bci-013879	Botrytis cinerea	36.36	2.00e-15	77.80
IUUC-Cja-019378	Callithrix jacchus	95.03	0.00e+00	1647.00
IUUC-Cfa-020871	Canis familiaris	94.48	0.00e+00	1750.00
IUUC-Cpo-021882	Cavia porcellus	94.57	0.00e+00	1680.00
IUUC-Csa-023903	Chlorocebus sabaeus	94.75	0.00e+00	1649.00
IUUC-Cho-024955	Choloepus hoffmanni	96.32	0.00e+00	834.00
IUUC-Csv-026103	Ciona savignyi	51.26	0.00e+00	663.00
IUUC-Cgl-026399	Colletotrichum gloeosporioides	32.00	8.00e-18	85.50
IUUC-Cne-026976	Cryptococcus neoformans	37.08	9.00e-19	87.80
IUUC-Dre-027777	Danio rerio	74.03	0.00e+00	1392.00
IUUC-Dno-029662	Dasypus novemcinctus	93.74	0.00e+00	1664.00
IUUC-Dse-031303	Dothistroma septosporum	33.33	1.00e-16	82.00
IUUC-Dme-032141	Drosophila melanogaster	49.11	2.00e-173	603.00
IUUC-Ete-032263	Echinops telfairi	89.77	0.00e+00	1299.00
IUUC-Eca-034304	Equus caballus	94.61	0.00e+00	1629.00
IUUC-Eeu-035275	Erinaceus europaeus	81.00	0.00e+00	699.00
IUUC-Fal-036825	Ficedula albicollis	87.87	0.00e+00	1556.00
IUUC-Fox-037687	Fusarium oxysporum	31.25	4.00e-18	86.70
IUUC-Gmo-039588	Gadus morhua	77.10	0.00e+00	939.00
IUUC-Ggr-039997	Gaeumannomyces graminis	30.00	2.00e-13	71.20
IUUC-Gga-041168	Gallus gallus	88.13	0.00e+00	1596.00
IUUC-Gac-041493	Gasterosteus aculeatus	79.04	0.00e+00	973.00
IUUC-Ggo-045273	Gorilla gorilla	92.45	0.00e+00	1564.00
IUUC-Hsa-045946	Homo sapiens	95.03	0.00e+00	1640.00
IUUC-Itr-048570	Ictidomys tridecemlineatus	95.19	0.00e+00	1622.00
IUUC-Kpa-049331	Komagataella pastoris	45.76	2.00e-12	65.90
IUUC-Lch-050495	Latimeria chalumnae	53.33	0.00e+00	993.00
IUUC-Loc-052152	Lepisosteus oculatus	79.05	0.00e+00	1514.00
IUUC-Lma-053193	Leptosphaeria maculans	40.82	5.00e-09	55.80
IUUC-Laf-053716	Loxodonta africana	94.76	0.00e+00	1707.00
IUUC-Mcc-054921	Macaca mulatta	94.75	0.00e+00	1651.00
IUUC-Meu-056172	Macropus eugenii	73.77	0.00e+00	953.00
IUUC-Mor-057115	Magnaporthe oryzae	41.25	9.00e-18	85.50
IUUC-Mpo-057623	Magnaporthe poae	36.49	2.00e-13	70.90
IUUC-Mla-059095	Melampsora laricipopulina	45.78	4.00e-19	89.40
IUUC-Mga-059751	Meleagris gallopavo	88.25	0.00e+00	1630.00
IUUC-Mvi-060310	Microbotryum violaceum	38.96	1.00e-14	75.10
IUUC-Mmr-060919	Microcebus murinus	95.67	0.00e+00	1681.00
IUUC-Mdo-062814	Monodelphis domestica	90.18	0.00e+00	1673.00
IUUC-Mmu-063683	Mus musculus	98.53	0.00e+00	1793.00
IUUC-Mpu-066167	Mustela putorius furo	94.38	0.00e+00	1713.00
IUUC-Mlu-067593	Myotis lucifugus	90.88	0.00e+00	1650.00
IUUC-Ncr-068796	Neurospora crassa	40.28	5.00e-17	82.80
IUUC-Nle-069303	Nomascus leucogenys	94.65	0.00e+00	1661.00
IUUC-Opr-070730	Ochotona princeps	85.53	0.00e+00	746.00
IUUC-Ont-071978	Oreochromis niloticus	75.13	0.00e+00	1394.00
IUUC-Oan-073362	Ornithorhynchus anatinus	81.94	5.00e-66	242.00
IUUC-Ocu-074259	Oryctolagus cuniculus	93.01	0.00e+00	1693.00
IUUC-Oba-075644	Oryza barthii	41.75	5.00e-16	78.20
IUUC-Ogl-077781	Oryza glaberrima	41.75	5.00e-16	78.20
IUUC-Oin-079062	Oryza indica	41.75	5.00e-16	78.20
IUUC-Oni-082151	Oryza nivara	41.75	6.00e-16	78.20
IUUC-Oru-084368	Oryza rufipogon	41.75	5.00e-16	78.20
IUUC-Osa-085311	Oryza sativa	40.78	2.00e-15	76.30
IUUC-Ola-087435	Oryzias latipes	59.37	0.00e+00	848.00
IUUC-Oga-088179	Otolemur garnettii	95.29	0.00e+00	1603.00
IUUC-Oar-090066	Ovis aries	86.62	0.00e+00	1572.00
IUUC-Ptr-091408	Pan troglodytes	95.12	0.00e+00	1644.00
IUUC-Pan-092196	Papio anubis	94.84	0.00e+00	1650.00
IUUC-Psi-093612	Pelodiscus sinensis	86.76	0.00e+00	1652.00
IUUC-Pma-094175	Petromyzon marinus	50.57	0.00e+00	720.00
IUUC-Ppa-095411	Physcomitrella patens	40.54	1.00e-14	73.20
IUUC-Pfo-096707	Poecilia formosa	74.11	0.00e+00	1395.00
IUUC-Pab-098254	Pongo abelii	89.62	0.00e+00	1538.00
IUUC-Pca-100662	Procavia capensis	86.46	0.00e+00	1580.00
IUUC-Pva-102540	Pteropus vampyrus	89.78	0.00e+00	1558.00
IUUC-Pte-104047	Pyrenophora teres	40.23	6.00e-18	84.70
IUUC-Pyt-104690	Pyrenophora triticirepentis	33.33	4.00e-14	73.20
IUUC-Sce-106322	Saccharomyces cerevisiae	25.00	6.00e-08	52.00
IUUC-Sha-106473	Sarcophilus harrisii	90.26	0.00e+00	1658.00
IUUC-Sja-107965	Schizosaccharomyces japonicus	32.73	1.00e-15	78.60
IUUC-Spo-108088	Schizosaccharomyces pombe	37.04	3.00e-16	80.10
IUUC-Ssl-108437	Sclerotinia sclerotiorum	29.79	3.00e-12	67.00
IUUC-Sly-111592	Solanum lycopersicum	31.93	2.00e-05	44.30
IUUC-Sar-113741	Sorex araneus	30.43	6.00e-14	73.90
IUUC-Sre-114990	Sporisorium reilianum	47.22	1.00e-19	91.30
IUUC-Ssc-116267	Sus scrofa	65.37	0.00e+00	865.00
IUUC-Tgu-117155	Taeniopygia guttata	85.82	0.00e+00	1311.00
IUUC-Tru-117958	Takifugu rubripes	74.55	0.00e+00	1429.00
IUUC-Tni-119805	Tetraodon nigroviridis	73.75	0.00e+00	1343.00
IUUC-Tre-122184	Trichoderma reesei	32.74	1.00e-16	81.60
IUUC-Tvi-122676	Trichoderma virens	31.45	2.00e-17	84.00
IUUC-Tme-127201	Tuber melanosporum	32.58	8.00e-18	85.50
IUUC-Tbe-127496	Tupaia belangeri	66.39	1.00e-81	298.00
IUUC-Ttr-128174	Tursiops truncatus	84.35	0.00e+00	1477.00
IUUC-Uma-129415	Ustilago maydis	45.00	4.00e-20	92.80
IUUC-Vda-129911	Verticillium dahliae	37.63	2.00e-17	84.30
IUUC-Xtr-131957	Xenopus tropicalis	76.35	0.00e+00	1365.00
IUUC-Xma-133604	Xiphophorus maculatus	60.03	0.00e+00	770.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence