iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012903

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02060368

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000020084.5	ENSBTAT00000012816.5	ENSBTAP00000012816.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.30e-09	35.4	340	387
E3 activity/RING/RING	4.40e-08	33.7	344	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+++ ++++e++l++    cP+++++l+e
   Q: 340  SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPY-CPLCKESLKE 387
           68***********************************9.*******986 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH f+++Cl++          + +CPlC+
   Q: 344  CSLCMRLFFE-PVTTPCGHSFCKNCLERC------LDHTPYCPLCK 382
           **********.9**************999......9*********7 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

PVTVPCGHSY CRRCLRRELR ARCRLCRDRL PPAAAPDAPG TSPRPPPATA IAASGFRTSV 60
VLNHLAEKWF PGQRERARAA GRLGELLYQG RYREALAAAC EELRAEPSDL TLKIYRAESY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGTGACAG TGCCCTGTGG CCACAGCTAC TGCCGCCGCT GCCTGCGGAG AGAGCTCCGC 60
GCGCGCTGCC GCCTCTGCCG GGACCGGCTG CCGCCCGCCG CGGCCCCCGA TGCCCCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0005622--C:intracellular
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

bta:504489

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	93.26	0.00e+00	1018.00
IUUC-Atr-002972	Amborella trichopoda	40.36	2.00e-43	170.00
IUUC-Apl-003309	Anas platyrhynchos	77.29	0.00e+00	639.00
IUUC-Aca-004288	Anolis carolinensis	65.99	0.00e+00	814.00
IUUC-Aly-005476	Arabidopsis lyrata	37.40	2.00e-40	159.00
IUUC-Ath-006654	Arabidopsis thaliana	37.40	8.00e-41	161.00
IUUC-Acl-008224	Aspergillus clavatus	30.34	5.00e-39	155.00
IUUC-Afu-008802	Aspergillus fumigatus	29.32	1.00e-38	154.00
IUUC-Ang-009643	Aspergillus niger	30.08	8.00e-39	155.00
IUUC-Ate-010489	Aspergillus terreus	32.89	2.00e-40	160.00
IUUC-Ame-010716	Astyanax mexicanus	51.85	1.00e-176	613.00
IUUC-Bdi-014333	Brachypodium distachyon	40.76	1.00e-41	164.00
IUUC-Bol-016150	Brassica oleracea	36.96	3.00e-40	159.00
IUUC-Bra-016716	Brassica rapa	36.07	8.00e-38	151.00
IUUC-Cja-019312	Callithrix jacchus	87.04	0.00e+00	1069.00
IUUC-Cfa-020159	Canis familiaris	92.67	0.00e+00	1121.00
IUUC-Cpo-022528	Cavia porcellus	89.87	0.00e+00	963.00
IUUC-Csa-023361	Chlorocebus sabaeus	87.20	0.00e+00	1011.00
IUUC-Cho-024549	Choloepus hoffmanni	83.27	0.00e+00	837.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	32.92	5.00e-47	182.00
IUUC-Cme-027153	Cyanidioschyzon merolae	30.13	5.00e-29	122.00
IUUC-Dre-028195	Danio rerio	50.46	8.00e-177	613.00
IUUC-Dno-029284	Dasypus novemcinctus	90.64	0.00e+00	1008.00
IUUC-Dor-031123	Dipodomys ordii	77.43	0.00e+00	700.00
IUUC-Dme-031919	Drosophila melanogaster	36.95	7.00e-65	242.00
IUUC-Ete-032455	Echinops telfairi	89.58	0.00e+00	759.00
IUUC-Eca-033248	Equus caballus	94.99	0.00e+00	776.00
IUUC-Eeu-034441	Erinaceus europaeus	92.31	0.00e+00	803.00
IUUC-Fca-035551	Felis catus	94.19	0.00e+00	1048.00
IUUC-Fal-036731	Ficedula albicollis	75.52	0.00e+00	827.00
IUUC-Gmo-039315	Gadus morhua	48.58	7.00e-161	560.00
IUUC-Gga-040888	Gallus gallus	77.64	0.00e+00	673.00
IUUC-Gac-042121	Gasterosteus aculeatus	53.43	1.00e-177	616.00
IUUC-Gma-042919	Glycine max	33.68	2.00e-38	153.00
IUUC-Ggo-044985	Gorilla gorilla	91.43	0.00e+00	1045.00
IUUC-Hsa-046592	Homo sapiens	87.04	0.00e+00	1067.00
IUUC-Hvu-047145	Hordeum vulgare	41.32	2.00e-24	106.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	92.00	0.00e+00	1086.00
IUUC-Lch-050404	Latimeria chalumnae	59.97	0.00e+00	709.00
IUUC-Laf-053431	Loxodonta africana	90.26	0.00e+00	998.00
IUUC-Mcc-055751	Macaca mulatta	85.37	0.00e+00	979.00
IUUC-Meu-055901	Macropus eugenii	39.08	1.00e-104	373.00
IUUC-Mor-056963	Magnaporthe oryzae	41.21	4.00e-41	162.00
IUUC-Mtr-058075	Medicago truncatula	33.57	7.00e-43	168.00
IUUC-Mla-058946	Melampsora laricipopulina	34.78	2.00e-46	180.00
IUUC-Mvi-060228	Microbotryum violaceum	34.38	1.00e-47	185.00
IUUC-Mmr-061283	Microcebus murinus	91.42	0.00e+00	1073.00
IUUC-Mdo-062203	Monodelphis domestica	46.79	9.00e-143	501.00
IUUC-Mmu-063169	Mus musculus	87.30	0.00e+00	1027.00
IUUC-Mac-065566	Musa acuminata	38.53	1.00e-44	174.00
IUUC-Mpu-066537	Mustela putorius furo	93.11	0.00e+00	1063.00
IUUC-Mlu-067497	Myotis lucifugus	92.88	0.00e+00	1030.00
IUUC-Nfi-068337	Neosartorya fischeri	29.32	4.00e-39	155.00
IUUC-Nle-068971	Nomascus leucogenys	92.68	0.00e+00	988.00
IUUC-Opr-070791	Ochotona princeps	91.19	0.00e+00	902.00
IUUC-Ont-071548	Oreochromis niloticus	52.91	0.00e+00	630.00
IUUC-Oan-072747	Ornithorhynchus anatinus	82.09	0.00e+00	694.00
IUUC-Ocu-074928	Oryctolagus cuniculus	93.48	0.00e+00	780.00
IUUC-Oba-075239	Oryza barthii	42.13	6.00e-42	165.00
IUUC-Obr-076158	Oryza brachyantha	42.08	2.00e-43	170.00
IUUC-Ogu-078154	Oryza glumaepatula	42.64	3.00e-42	166.00
IUUC-Oin-079067	Oryza indica	35.45	3.00e-42	166.00
IUUC-Olo-080663	Oryza longistaminata	42.13	8.00e-42	164.00
IUUC-Oni-082119	Oryza nivara	35.45	2.00e-42	166.00
IUUC-Opu-083266	Oryza punctata	42.11	5.00e-31	128.00
IUUC-Oru-085190	Oryza rufipogon	42.13	9.00e-42	164.00
IUUC-Ola-086977	Oryzias latipes	53.14	0.00e+00	627.00
IUUC-Oga-088719	Otolemur garnettii	89.24	0.00e+00	1079.00
IUUC-Oar-089577	Ovis aries	99.07	0.00e+00	1096.00
IUUC-Ptr-090711	Pan troglodytes	87.20	0.00e+00	1070.00
IUUC-Pan-092587	Papio anubis	87.04	0.00e+00	1050.00
IUUC-Psi-093128	Pelodiscus sinensis	74.04	0.00e+00	866.00
IUUC-Ppa-095462	Physcomitrella patens	32.10	4.00e-08	52.40
IUUC-Pfo-096474	Poecilia formosa	52.80	0.00e+00	629.00
IUUC-Pab-097800	Pongo abelii	86.28	0.00e+00	1048.00
IUUC-Pop-100044	Populus trichocarpa	33.68	5.00e-43	168.00
IUUC-Ppe-101621	Prunus persica	41.03	6.00e-36	145.00
IUUC-Pgr-103289	Puccinia graminis	26.27	4.00e-26	112.00
IUUC-Rno-105718	Rattus norvegicus	90.33	0.00e+00	1004.00
IUUC-Sit-110495	Setaria italica	40.10	5.00e-41	162.00
IUUC-Sly-111396	Solanum lycopersicum	33.90	6.00e-42	165.00
IUUC-Sar-113220	Sorex araneus	88.13	0.00e+00	727.00
IUUC-Sbi-114779	Sorghum bicolor	38.65	1.00e-28	120.00
IUUC-Ssc-115733	Sus scrofa	95.46	0.00e+00	1145.00
IUUC-Tgu-117431	Taeniopygia guttata	68.97	0.00e+00	853.00
IUUC-Tru-118274	Takifugu rubripes	52.54	2.00e-172	598.00
IUUC-Tsy-119043	Tarsius syrichta	91.93	0.00e+00	992.00
IUUC-Tni-120766	Tetraodon nigroviridis	49.47	2.00e-167	582.00
IUUC-Tca-121632	Theobroma cacao	32.17	6.00e-44	171.00
IUUC-Tae-124676	Triticum aestivum	34.47	2.00e-43	170.00
IUUC-Tur-126297	Triticum urartu	40.74	5.00e-32	132.00
IUUC-Tme-127112	Tuber melanosporum	37.35	7.00e-47	181.00
IUUC-Tbe-127284	Tupaia belangeri	89.66	0.00e+00	773.00
IUUC-Vda-129721	Verticillium dahliae	27.56	4.00e-36	145.00
IUUC-Vpa-130408	Vicugna pacos	87.59	0.00e+00	920.00
IUUC-Vvi-130910	Vitis vinifera	32.53	4.00e-38	152.00
IUUC-Xtr-132417	Xenopus tropicalis	60.81	0.00e+00	720.00
IUUC-Xma-134099	Xiphophorus maculatus	52.46	0.00e+00	627.00
IUUC-Zma-135914	Zea mays	39.84	1.00e-24	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence