iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010372.1	ENSSHAT00000012198.1	ENSSHAP00000012100.1
ENSSHAG00000010372.1	ENSSHAT00000012199.1	ENSSHAP00000012101.1
ENSSHAG00000010372.1	ENSSHAT00000012200.1	ENSSHAP00000012102.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-29	100.1	95	128

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H ++++c+++ ++ + +v+Gs+D t+k+WD+rt 
   Q: 95   HDAPIRCVEYcPEvNVMVTGSWDQTVKLWDPRTP 128
           999********999****************9985 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MTGSNEFKLN QPPEDGISSV KFSPNTSQFL LVSSWDTSVR LYDVPANTMR LKYQHTGAVL 60
DCAFYDPTHA WSGGLDHQLK MHDLNTDQEN LVGTHDAPIR CVEYCPEVNV MVTGSWDQTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCGGGT CCAATGAGTT CAAGTTGAAC CAGCCTCCAG AAGATGGCAT CTCCTCAGTG 60
AAGTTCAGTC CCAACACATC CCAGTTCCTG CTGGTCTCTT CCTGGGATAC TTCGGTTCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0005654--C:nucleoplasm
GO:0008608--P:attachment of spindle microtubules to kinetochore
GO:0000070--P:mitotic sister chromatid segregation
GO:0051983--P:regulation of chromosome segregation
GO:0071173--P:spindle assembly checkpoint

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000710	Aegilops tauschii	50.00	3.00e-65	241.00
IUUC-Aml-002418	Ailuropoda melanoleuca	99.69	0.00e+00	683.00
IUUC-Atr-002511	Amborella trichopoda	53.73	1.00e-103	369.00
IUUC-Apl-003201	Anas platyrhynchos	96.59	0.00e+00	665.00
IUUC-Aca-004657	Anolis carolinensis	97.84	0.00e+00	673.00
IUUC-Aly-005707	Arabidopsis lyrata	55.66	3.00e-105	374.00
IUUC-Ath-007454	Arabidopsis thaliana	55.03	4.00e-104	370.00
IUUC-Ago-008004	Ashbya gossypii	36.66	4.00e-56	211.00
IUUC-Acl-008120	Aspergillus clavatus	38.07	1.00e-69	256.00
IUUC-Afu-009061	Aspergillus fumigatus	38.18	7.00e-71	260.00
IUUC-Ani-009457	Aspergillus nidulans	39.15	5.00e-72	264.00
IUUC-Ang-009848	Aspergillus niger	37.64	4.00e-68	251.00
IUUC-Aor-009886	Aspergillus oryzae	36.86	5.00e-64	237.00
IUUC-Ate-010388	Aspergillus terreus	38.35	6.00e-69	254.00
IUUC-Ame-011039	Astyanax mexicanus	87.65	2.00e-177	613.00
IUUC-Bgr-012134	Blumeria graminis	37.25	1.00e-68	253.00
IUUC-Bta-012959	Bos taurus	99.69	0.00e+00	685.00
IUUC-Bci-013818	Botrytis cinerea	40.00	2.00e-69	255.00
IUUC-Bdi-014928	Brachypodium distachyon	53.42	5.00e-104	370.00
IUUC-Bol-016443	Brassica oleracea	55.49	4.00e-105	374.00
IUUC-Bra-016981	Brassica rapa	55.35	3.00e-106	377.00
IUUC-Cel-018211	Caenorhabditis elegans	43.33	4.00e-77	281.00
IUUC-Cja-018807	Callithrix jacchus	98.78	0.00e+00	686.00
IUUC-Cfa-020279	Canis familiaris	99.19	2.00e-149	520.00
IUUC-Cpo-022411	Cavia porcellus	99.08	0.00e+00	687.00
IUUC-Cre-022964	Chlamydomonas reinhardtii	46.63	4.00e-79	287.00
IUUC-Csa-024046	Chlorocebus sabaeus	99.60	1.00e-152	531.00
IUUC-Cho-024930	Choloepus hoffmanni	98.47	0.00e+00	683.00
IUUC-Cin-025561	Ciona intestinalis	70.28	7.00e-141	493.00
IUUC-Csv-026129	Ciona savignyi	68.73	7.00e-139	486.00
IUUC-Cgl-026764	Colletotrichum gloeosporioides	37.82	6.00e-67	247.00
IUUC-Cne-026832	Cryptococcus neoformans	39.08	2.00e-54	206.00
IUUC-Cme-027243	Cyanidioschyzon merolae	35.38	8.00e-49	187.00
IUUC-Dre-028257	Danio rerio	85.80	2.00e-164	571.00
IUUC-Dno-029433	Dasypus novemcinctus	99.08	0.00e+00	688.00
IUUC-Dor-030318	Dipodomys ordii	98.78	0.00e+00	685.00
IUUC-Dme-031609	Drosophila melanogaster	60.56	1.00e-116	412.00
IUUC-Ete-032903	Echinops telfairi	82.26	3.00e-155	540.00
IUUC-Eca-034333	Equus caballus	99.08	0.00e+00	687.00
IUUC-Fca-035848	Felis catus	99.08	0.00e+00	687.00
IUUC-Fal-037239	Ficedula albicollis	96.91	0.00e+00	672.00
IUUC-Fox-037712	Fusarium oxysporum	36.81	1.00e-65	243.00
IUUC-Fso-038165	Fusarium solani	37.39	5.00e-65	241.00
IUUC-Gmo-039586	Gadus morhua	85.45	7.00e-172	595.00
IUUC-Ggr-040019	Gaeumannomyces graminis	37.43	2.00e-58	219.00
IUUC-Gga-040565	Gallus gallus	96.60	0.00e+00	669.00
IUUC-Gac-041299	Gasterosteus aculeatus	86.24	4.00e-175	606.00
IUUC-Gma-042865	Glycine max	53.77	1.00e-102	365.00
IUUC-Ggo-045135	Gorilla gorilla	99.08	0.00e+00	687.00
IUUC-Hsa-045788	Homo sapiens	99.08	0.00e+00	687.00
IUUC-Itr-048845	Ictidomys tridecemlineatus	99.69	0.00e+00	685.00
IUUC-Lch-050423	Latimeria chalumnae	93.83	0.00e+00	652.00
IUUC-Lpe-051670	Leersia perrieri	55.28	1.00e-107	382.00
IUUC-Loc-052148	Lepisosteus oculatus	89.81	0.00e+00	629.00
IUUC-Lma-053147	Leptosphaeria maculans	39.47	8.00e-69	253.00
IUUC-Laf-054429	Loxodonta africana	99.07	0.00e+00	675.00
IUUC-Mcc-055649	Macaca mulatta	99.08	0.00e+00	687.00
IUUC-Meu-056019	Macropus eugenii	86.07	2.00e-163	567.00
IUUC-Mpo-057390	Magnaporthe poae	37.84	1.00e-58	219.00
IUUC-Mtr-058803	Medicago truncatula	53.73	1.00e-103	369.00
IUUC-Mla-059131	Melampsora laricipopulina	39.94	4.00e-69	254.00
IUUC-Mga-059227	Meleagris gallopavo	96.30	0.00e+00	663.00
IUUC-Mmr-060811	Microcebus murinus	99.08	0.00e+00	687.00
IUUC-Mdo-062582	Monodelphis domestica	95.82	0.00e+00	673.00
IUUC-Mmu-064048	Mus musculus	99.69	0.00e+00	685.00
IUUC-Mac-064572	Musa acuminata	54.46	5.00e-104	370.00
IUUC-Mpu-066592	Mustela putorius furo	99.08	0.00e+00	687.00
IUUC-Mlu-067466	Myotis lucifugus	98.14	0.00e+00	669.00
IUUC-Nfi-068486	Neosartorya fischeri	38.22	8.00e-70	256.00
IUUC-Ncr-068899	Neurospora crassa	38.57	3.00e-69	255.00
IUUC-Nle-069273	Nomascus leucogenys	99.08	0.00e+00	687.00
IUUC-Opr-070473	Ochotona princeps	93.27	0.00e+00	647.00
IUUC-Ont-072515	Oreochromis niloticus	87.65	7.00e-178	615.00
IUUC-Oan-073344	Ornithorhynchus anatinus	99.64	4.00e-169	586.00
IUUC-Ocu-073931	Oryctolagus cuniculus	98.47	0.00e+00	686.00
IUUC-Oba-075450	Oryza barthii	55.28	1.00e-107	382.00
IUUC-Obr-076202	Oryza brachyantha	55.28	1.00e-107	382.00
IUUC-Ogl-077809	Oryza glaberrima	55.28	1.00e-107	382.00
IUUC-Ogu-078034	Oryza glumaepatula	51.60	6.00e-103	367.00
IUUC-Oin-079586	Oryza indica	55.28	1.00e-107	382.00
IUUC-Olo-080351	Oryza longistaminata	50.96	3.00e-94	337.00
IUUC-Ome-081913	Oryza meridionalis	45.20	2.00e-79	288.00
IUUC-Oni-082048	Oryza nivara	55.28	1.00e-107	382.00
IUUC-Opu-083951	Oryza punctata	55.28	2.00e-107	382.00
IUUC-Oru-084904	Oryza rufipogon	55.28	2.00e-107	381.00
IUUC-Osa-085399	Oryza sativa	55.28	1.00e-107	382.00
IUUC-Ola-086605	Oryzias latipes	87.96	6.00e-178	616.00
IUUC-Oga-088115	Otolemur garnettii	99.08	0.00e+00	687.00
IUUC-Oar-089301	Ovis aries	98.78	0.00e+00	685.00
IUUC-Pan-092156	Papio anubis	99.08	0.00e+00	687.00
IUUC-Psi-094031	Pelodiscus sinensis	98.15	0.00e+00	678.00
IUUC-Pma-094724	Petromyzon marinus	82.10	1.00e-167	581.00
IUUC-Pno-094848	Phaeosphaeria nodorum	39.76	3.00e-52	197.00
IUUC-Ppa-096018	Physcomitrella patens	57.83	1.00e-109	389.00
IUUC-Pfo-096256	Poecilia formosa	87.65	4.00e-177	613.00
IUUC-Pab-097757	Pongo abelii	99.08	0.00e+00	687.00
IUUC-Pop-099511	Populus trichocarpa	55.17	2.00e-105	375.00
IUUC-Pca-100326	Procavia capensis	98.32	7.00e-143	498.00
IUUC-Ppe-101462	Prunus persica	55.35	9.00e-105	373.00
IUUC-Pva-102523	Pteropus vampyrus	99.08	0.00e+00	687.00
IUUC-Pgr-103482	Puccinia graminis	40.29	1.00e-56	213.00
IUUC-Ptt-103911	Puccinia triticina	39.09	9.00e-66	244.00
IUUC-Pte-104350	Pyrenophora teres	38.60	2.00e-68	252.00
IUUC-Pyt-104538	Pyrenophora triticirepentis	38.60	3.00e-68	251.00
IUUC-Rno-105388	Rattus norvegicus	64.51	7.00e-108	384.00
IUUC-Sja-107725	Schizosaccharomyces japonicus	37.20	3.00e-55	208.00
IUUC-Spo-108103	Schizosaccharomyces pombe	38.19	1.00e-54	206.00
IUUC-Ssl-108521	Sclerotinia sclerotiorum	35.78	5.00e-37	147.00
IUUC-Smo-109187	Selaginella moellendorffii	54.38	3.00e-104	371.00
IUUC-Sit-110412	Setaria italica	52.55	7.00e-99	353.00
IUUC-Sly-111541	Solanum lycopersicum	54.49	1.00e-102	365.00
IUUC-Stu-112371	Solanum tuberosum	54.17	3.00e-102	364.00
IUUC-Sar-113159	Sorex araneus	77.31	9.00e-106	375.00
IUUC-Sbi-114880	Sorghum bicolor	54.97	1.00e-106	379.00
IUUC-Sre-115205	Sporisorium reilianum	30.53	6.00e-46	177.00
IUUC-Ssc-116399	Sus scrofa	99.08	0.00e+00	687.00
IUUC-Tgu-117029	Taeniopygia guttata	96.59	0.00e+00	667.00
IUUC-Tru-118385	Takifugu rubripes	87.65	6.00e-177	612.00
IUUC-Tsy-118842	Tarsius syrichta	98.17	0.00e+00	681.00
IUUC-Tni-120539	Tetraodon nigroviridis	86.46	2.00e-174	604.00
IUUC-Tca-121027	Theobroma cacao	54.72	3.00e-103	368.00
IUUC-Tre-122098	Trichoderma reesei	36.81	5.00e-62	231.00
IUUC-Tvi-122569	Trichoderma virens	37.10	2.00e-64	238.00
IUUC-Tae-123002	Triticum aestivum	54.66	2.00e-106	379.00
IUUC-Tur-126282	Triticum urartu	51.36	7.00e-67	246.00
IUUC-Tme-127210	Tuber melanosporum	48.10	4.00e-83	301.00
IUUC-Tbe-128159	Tupaia belangeri	68.20	8.00e-123	432.00
IUUC-Ttr-128743	Tursiops truncatus	99.08	0.00e+00	687.00
IUUC-Uma-129496	Ustilago maydis	32.69	3.00e-40	159.00
IUUC-Vda-129882	Verticillium dahliae	40.23	5.00e-70	257.00
IUUC-Vpa-130790	Vicugna pacos	99.24	3.00e-159	553.00
IUUC-Vvi-131671	Vitis vinifera	54.35	5.00e-104	370.00
IUUC-Xtr-132887	Xenopus tropicalis	82.72	2.00e-158	551.00
IUUC-Xma-134127	Xiphophorus maculatus	87.65	6.00e-177	612.00
IUUC-Yli-134366	Yarrowia lipolytica	40.60	2.00e-53	202.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence