iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114027

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G125500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g011070	Sb10g011070.1	Sb10g011070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-07	31.7	292	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +  + l CgH+fh +Cl  w        ++ +CP+Cr
   Q: 292  CIICREEMTT-AKKLLCGHLFHVHCLRSW------LERQHTCPTCR 330
           ********99.88999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MIRLQTYAAF SLLATASAVY YAFSSREQFY PAMVYLSTSK ICFVLLLNTG LVAMCVAWQL 60
VKRLFLGSLR EAEVERLNEQ AWREVVEILF AVTIFRQDFS VSFLAMVAAL LLIKALHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCGTC TTCAGACGTA CGCGGCGTTC AGCCTGCTGG CGACGGCGTC GGCGGTGTAC 60
TACGCCTTCA GCAGCCGGGA GCAGTTCTAC CCGGCCATGG TCTACCTCTC CACCTCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0044322--C:endoplasmic reticulum quality control compartment
GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:1990381--F:ubiquitin-specific protease binding
GO:0051082--F:unfolded protein binding
GO:0008270--F:zinc ion binding
GO:0030968--P:endoplasmic reticulum unfolded protein response
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

sbi:SORBI_10g011070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001539	Ailuropoda melanoleuca	42.09	2.00e-76	279.00
IUUC-Atr-002892	Amborella trichopoda	70.24	3.00e-162	563.00
IUUC-Aly-006352	Arabidopsis lyrata	67.20	1.00e-161	561.00
IUUC-Ath-006773	Arabidopsis thaliana	65.84	7.00e-158	549.00
IUUC-Acl-008041	Aspergillus clavatus	33.49	3.00e-64	239.00
IUUC-Ani-009133	Aspergillus nidulans	33.50	1.00e-66	247.00
IUUC-Ang-009612	Aspergillus niger	39.53	2.00e-66	246.00
IUUC-Aor-010045	Aspergillus oryzae	32.85	8.00e-66	244.00
IUUC-Ate-010533	Aspergillus terreus	33.33	1.00e-63	236.00
IUUC-Bgr-012122	Blumeria graminis	37.63	4.00e-34	139.00
IUUC-Bta-013375	Bos taurus	42.39	2.00e-76	279.00
IUUC-Bdi-015070	Brachypodium distachyon	80.95	0.00e+00	726.00
IUUC-Bol-015674	Brassica oleracea	67.55	7.00e-160	556.00
IUUC-Bra-017516	Brassica rapa	59.48	4.00e-151	526.00
IUUC-Cel-018422	Caenorhabditis elegans	40.49	1.00e-70	259.00
IUUC-Cja-019779	Callithrix jacchus	41.19	9.00e-71	260.00
IUUC-Cfa-020189	Canis familiaris	42.39	7.00e-78	284.00
IUUC-Cpo-022209	Cavia porcellus	42.39	3.00e-77	281.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	51.10	2.00e-95	341.00
IUUC-Csa-023571	Chlorocebus sabaeus	42.39	7.00e-77	280.00
IUUC-Cho-024889	Choloepus hoffmanni	37.61	2.00e-64	239.00
IUUC-Cin-025215	Ciona intestinalis	29.55	1.00e-41	164.00
IUUC-Cne-027002	Cryptococcus neoformans	37.58	7.00e-75	274.00
IUUC-Cme-027285	Cyanidioschyzon merolae	38.03	2.00e-59	222.00
IUUC-Dno-029250	Dasypus novemcinctus	42.39	1.00e-76	280.00
IUUC-Dor-030718	Dipodomys ordii	41.49	5.00e-72	264.00
IUUC-Dme-031969	Drosophila melanogaster	40.42	1.00e-74	273.00
IUUC-Eca-033258	Equus caballus	42.39	1.00e-76	280.00
IUUC-Fca-035980	Felis catus	42.39	1.00e-77	283.00
IUUC-Fox-037902	Fusarium oxysporum	45.40	5.00e-38	151.00
IUUC-Fso-038418	Fusarium solani	33.42	7.00e-54	204.00
IUUC-Gmo-039288	Gadus morhua	41.34	7.00e-75	273.00
IUUC-Ggr-040076	Gaeumannomyces graminis	30.75	2.00e-54	206.00
IUUC-Gma-044123	Glycine max	68.89	4.00e-173	600.00
IUUC-Ggo-044858	Gorilla gorilla	42.39	1.00e-76	280.00
IUUC-Hsa-046412	Homo sapiens	42.39	1.00e-76	280.00
IUUC-Itr-048924	Ictidomys tridecemlineatus	42.39	1.00e-76	279.00
IUUC-Kpa-049117	Komagataella pastoris	26.28	5.00e-29	121.00
IUUC-Lpe-051229	Leersia perrieri	93.18	3.00e-82	297.00
IUUC-Laf-053482	Loxodonta africana	42.39	1.00e-76	280.00
IUUC-Mcc-055075	Macaca mulatta	42.39	1.00e-76	280.00
IUUC-Mor-057082	Magnaporthe oryzae	32.95	2.00e-58	220.00
IUUC-Mpo-057573	Magnaporthe poae	32.45	4.00e-53	201.00
IUUC-Mtr-058601	Medicago truncatula	66.45	7.00e-177	612.00
IUUC-Mla-059168	Melampsora laricipopulina	38.44	3.00e-76	279.00
IUUC-Mvi-060515	Microbotryum violaceum	37.90	1.00e-64	240.00
IUUC-Mmr-060922	Microcebus murinus	42.39	4.00e-77	281.00
IUUC-Mdo-062491	Monodelphis domestica	41.79	5.00e-73	267.00
IUUC-Mmu-063770	Mus musculus	42.39	9.00e-77	280.00
IUUC-Mlu-067918	Myotis lucifugus	42.90	2.00e-72	266.00
IUUC-Nfi-068389	Neosartorya fischeri	32.49	1.00e-61	230.00
IUUC-Nle-069139	Nomascus leucogenys	42.39	1.00e-76	280.00
IUUC-Opr-070898	Ochotona princeps	46.00	8.00e-49	187.00
IUUC-Ont-071991	Oreochromis niloticus	41.85	5.00e-77	281.00
IUUC-Oin-080013	Oryza indica	82.64	0.00e+00	733.00
IUUC-Olu-087894	Ostreococcus lucimarinus	48.83	6.00e-91	326.00
IUUC-Oga-089036	Otolemur garnettii	42.39	7.00e-77	280.00
IUUC-Oar-089715	Ovis aries	42.39	1.00e-76	280.00
IUUC-Ptr-091000	Pan troglodytes	42.39	2.00e-76	279.00
IUUC-Pan-092187	Papio anubis	42.39	4.00e-77	281.00
IUUC-Pma-094759	Petromyzon marinus	48.18	3.00e-36	145.00
IUUC-Ppa-095684	Physcomitrella patens	69.72	6.00e-125	440.00
IUUC-Pab-098030	Pongo abelii	42.39	1.00e-76	280.00
IUUC-Pop-099245	Populus trichocarpa	63.16	0.00e+00	642.00
IUUC-Pca-100191	Procavia capensis	41.49	9.00e-73	266.00
IUUC-Ppe-101829	Prunus persica	61.97	1.00e-178	619.00
IUUC-Pva-102689	Pteropus vampyrus	42.09	3.00e-76	278.00
IUUC-Pgr-103286	Puccinia graminis	37.50	1.00e-75	277.00
IUUC-Ptt-103919	Puccinia triticina	38.21	6.00e-74	270.00
IUUC-Rno-105723	Rattus norvegicus	42.39	1.00e-76	279.00
IUUC-Sja-107685	Schizosaccharomyces japonicus	29.87	4.00e-40	158.00
IUUC-Spo-108308	Schizosaccharomyces pombe	31.79	9.00e-46	177.00
IUUC-Sit-110276	Setaria italica	91.49	0.00e+00	851.00
IUUC-Stu-112048	Solanum tuberosum	67.00	4.00e-159	553.00
IUUC-Sre-115212	Sporisorium reilianum	40.11	1.00e-70	260.00
IUUC-Ssc-116323	Sus scrofa	42.69	5.00e-77	281.00
IUUC-Tru-118045	Takifugu rubripes	41.49	8.00e-76	277.00
IUUC-Tsy-118823	Tarsius syrichta	37.19	3.00e-52	197.00
IUUC-Tca-121462	Theobroma cacao	69.93	1.00e-175	608.00
IUUC-Tme-127197	Tuber melanosporum	39.61	9.00e-72	264.00
IUUC-Tbe-127385	Tupaia belangeri	37.91	4.00e-65	241.00
IUUC-Ttr-128795	Tursiops truncatus	42.39	1.00e-76	280.00
IUUC-Vvi-130944	Vitis vinifera	71.29	9.00e-176	608.00
IUUC-Xtr-131884	Xenopus tropicalis	41.32	9.00e-75	273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence