iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012592

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

E3 ubiquitin-protein ligase RNF25

Genbank Nucleotide ID

DAAA02005932

Gene Name

RNF25

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000003817.4	ENSBTAT00000004972.4	ENSBTAP00000004972.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.0	135	201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkw.............pglknssskefr................CPlCr 46
           C iCl+ f  k+    +pC H fh +Cl ++                        r                CP+Cr
   Q: 135  CVICLYGFqeKEAFTKTPCYHYFHCHCLARYiqhmehelqaqgrE----------ReqerqhaapeqavgvqCPVCR 201
           ********65333556************99977755555443330..........24555566777777777****8 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAVSASVAAG DEDWVLPSEV EVLESIYLDE LQVVKGNGRS SPWEIYITLH PATAEDQDSQ 60
YVCFTLVLQV PTQYPHEVPQ ISIRNPRGLS DEQIHKISQA LSHVAEAGLG TAMLYELIEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCACCCCGCG CGCTCAGCGG ACAGGAGCCC CTCTCTTACC CCCAGCCTAG GAGCTTCAAG 60
CTCCTCAGGC CGAGGGACGC CGGCCCTGGC CTTCAGCTCC GCCCCTTCTG GCTGCCTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	86.06	0.00e+00	689.00
IUUC-Atr-002830	Amborella trichopoda	25.72	4.00e-16	79.00
IUUC-Apl-003293	Anas platyrhynchos	69.14	4.00e-96	344.00
IUUC-Aca-005092	Anolis carolinensis	48.24	1.00e-109	390.00
IUUC-Aly-005434	Arabidopsis lyrata	28.83	8.00e-19	87.80
IUUC-Ath-006770	Arabidopsis thaliana	27.98	6.00e-19	88.20
IUUC-Ame-011754	Astyanax mexicanus	49.80	3.00e-59	222.00
IUUC-Bdi-015061	Brachypodium distachyon	24.72	6.00e-15	75.10
IUUC-Bol-015743	Brassica oleracea	28.63	3.00e-17	82.40
IUUC-Bra-018072	Brassica rapa	27.87	6.00e-15	74.70
IUUC-Cel-018515	Caenorhabditis elegans	23.19	2.00e-06	45.80
IUUC-Cja-018930	Callithrix jacchus	83.22	0.00e+00	724.00
IUUC-Cfa-020156	Canis familiaris	86.49	0.00e+00	734.00
IUUC-Cpo-021290	Cavia porcellus	79.74	0.00e+00	705.00
IUUC-Csa-023214	Chlorocebus sabaeus	82.79	0.00e+00	728.00
IUUC-Cin-025416	Ciona intestinalis	30.97	8.00e-44	171.00
IUUC-Csv-026360	Ciona savignyi	36.82	5.00e-43	168.00
IUUC-Dre-028670	Danio rerio	47.88	3.00e-55	209.00
IUUC-Dno-029970	Dasypus novemcinctus	83.66	0.00e+00	724.00
IUUC-Dor-030152	Dipodomys ordii	79.03	0.00e+00	658.00
IUUC-Dme-031914	Drosophila melanogaster	37.80	1.00e-38	153.00
IUUC-Ete-033105	Echinops telfairi	73.70	5.00e-154	537.00
IUUC-Eca-033800	Equus caballus	85.84	0.00e+00	684.00
IUUC-Eeu-034525	Erinaceus europaeus	66.37	1.00e-128	453.00
IUUC-Fca-035644	Felis catus	87.15	0.00e+00	776.00
IUUC-Fal-037121	Ficedula albicollis	51.50	4.00e-110	391.00
IUUC-Gmo-039444	Gadus morhua	50.60	4.00e-60	225.00
IUUC-Gga-041221	Gallus gallus	44.08	2.00e-75	276.00
IUUC-Gac-042354	Gasterosteus aculeatus	50.78	2.00e-67	249.00
IUUC-Gma-043721	Glycine max	28.33	2.00e-16	80.50
IUUC-Ggo-044879	Gorilla gorilla	83.01	0.00e+00	724.00
IUUC-Hsa-045739	Homo sapiens	82.79	0.00e+00	725.00
IUUC-Itr-047915	Ictidomys tridecemlineatus	82.79	0.00e+00	683.00
IUUC-Lch-050277	Latimeria chalumnae	51.95	1.00e-72	267.00
IUUC-Lpe-051139	Leersia perrieri	26.95	9.00e-16	77.80
IUUC-Loc-052367	Lepisosteus oculatus	59.49	2.00e-21	93.20
IUUC-Laf-053559	Loxodonta africana	78.21	0.00e+00	711.00
IUUC-Mcc-055367	Macaca mulatta	75.38	0.00e+00	663.00
IUUC-Meu-056730	Macropus eugenii	70.72	2.00e-144	505.00
IUUC-Mtr-058418	Medicago truncatula	27.39	2.00e-14	73.20
IUUC-Mga-060090	Meleagris gallopavo	43.50	9.00e-67	247.00
IUUC-Mmr-060618	Microcebus murinus	84.53	0.00e+00	746.00
IUUC-Mdo-063084	Monodelphis domestica	71.05	2.00e-153	535.00
IUUC-Mmu-063854	Mus musculus	78.43	0.00e+00	681.00
IUUC-Mac-064922	Musa acuminata	28.57	6.00e-19	88.20
IUUC-Mpu-066419	Mustela putorius furo	84.53	0.00e+00	709.00
IUUC-Mlu-067289	Myotis lucifugus	82.57	0.00e+00	710.00
IUUC-Nle-069090	Nomascus leucogenys	83.44	0.00e+00	752.00
IUUC-Opr-070601	Ochotona princeps	78.21	0.00e+00	634.00
IUUC-Ont-072434	Oreochromis niloticus	53.15	2.00e-68	253.00
IUUC-Ocu-074855	Oryctolagus cuniculus	78.65	0.00e+00	668.00
IUUC-Oba-075792	Oryza barthii	26.74	5.00e-19	88.60
IUUC-Obr-076917	Oryza brachyantha	27.17	5.00e-19	88.60
IUUC-Ogl-077872	Oryza glaberrima	25.56	9.00e-17	81.30
IUUC-Ogu-078151	Oryza glumaepatula	26.14	2.00e-18	86.70
IUUC-Oin-079465	Oryza indica	26.14	2.00e-18	87.00
IUUC-Olo-080907	Oryza longistaminata	25.82	3.00e-13	70.50
IUUC-Ome-081752	Oryza meridionalis	25.95	7.00e-18	85.10
IUUC-Oni-082420	Oryza nivara	26.14	2.00e-18	86.70
IUUC-Opu-083810	Oryza punctata	27.82	6.00e-19	88.20
IUUC-Oru-085177	Oryza rufipogon	26.74	5.00e-19	88.60
IUUC-Ola-087231	Oryzias latipes	54.41	2.00e-51	195.00
IUUC-Oga-088963	Otolemur garnettii	83.88	0.00e+00	756.00
IUUC-Oar-089292	Ovis aries	95.65	0.00e+00	842.00
IUUC-Ptr-091214	Pan troglodytes	83.01	0.00e+00	728.00
IUUC-Pan-092823	Papio anubis	83.88	0.00e+00	775.00
IUUC-Psi-094084	Pelodiscus sinensis	62.02	2.00e-39	156.00
IUUC-Pfo-096406	Poecilia formosa	49.61	3.00e-62	232.00
IUUC-Pab-098212	Pongo abelii	83.44	0.00e+00	730.00
IUUC-Pop-099369	Populus trichocarpa	25.67	1.00e-15	77.40
IUUC-Pca-100897	Procavia capensis	74.07	4.00e-175	607.00
IUUC-Ppe-101702	Prunus persica	24.08	9.00e-14	71.20
IUUC-Pva-102899	Pteropus vampyrus	84.97	0.00e+00	714.00
IUUC-Rno-105369	Rattus norvegicus	78.87	0.00e+00	692.00
IUUC-Sha-107344	Sarcophilus harrisii	70.72	2.00e-146	511.00
IUUC-Smo-109636	Selaginella moellendorffii	24.50	7.00e-09	53.10
IUUC-Sit-109795	Setaria italica	28.57	2.00e-20	93.20
IUUC-Sly-111014	Solanum lycopersicum	25.40	2.00e-17	84.70
IUUC-Stu-112139	Solanum tuberosum	26.49	9.00e-20	90.90
IUUC-Sar-113487	Sorex araneus	92.66	2.00e-54	206.00
IUUC-Sbi-114714	Sorghum bicolor	28.25	3.00e-21	95.90
IUUC-Ssc-115465	Sus scrofa	85.62	0.00e+00	757.00
IUUC-Tgu-117113	Taeniopygia guttata	74.15	1.00e-96	346.00
IUUC-Tsy-119186	Tarsius syrichta	71.63	5.00e-54	204.00
IUUC-Tni-120219	Tetraodon nigroviridis	53.74	2.00e-36	144.00
IUUC-Tca-121748	Theobroma cacao	26.89	1.00e-14	73.60
IUUC-Tae-123014	Triticum aestivum	26.86	1.00e-15	77.00
IUUC-Tbe-127584	Tupaia belangeri	70.90	3.00e-112	398.00
IUUC-Ttr-128244	Tursiops truncatus	86.49	0.00e+00	712.00
IUUC-Vpa-130354	Vicugna pacos	89.44	0.00e+00	755.00
IUUC-Xtr-132402	Xenopus tropicalis	50.37	8.00e-73	267.00
IUUC-Xma-133442	Xiphophorus maculatus	49.61	2.00e-62	233.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence