iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132402

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

LOC496760 protein; Ring finger protein 25

Genbank Nucleotide ID

AAMC01105984

Gene Name

rnf25; LOC496760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000018815.3	ENSXETT00000040807.3	ENSXETP00000040807.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-07	32.0	175	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C iCl+ f++g  +  +pC H+fh  Cl ++      +k+++  + +CP+Cr
   Q: 175  CVICLYNFQEGdsLTKTPCFHHFHSYCLGRYaqhsTEQKQMEELSVLCPVCR 226
           ********66655777************9998888788888888889****8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

ERGYGFFSVE GLHVSINYST QDSKHSRGDH GICSLTAFRG SAGFMEFVMT VNRADCNESL 60
QQELQVLESI YPDELQICRG ERVVLSITLH PATGHDEETQ YVRITLELSL PPKYPAEVPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAAAGAGG CTATGGATTT TTTAGTGTAG AGGGGTTACA TGTTTCCATA AACTACAGCA 60
CCCAGGATTC CAAACACAGC CGAGGGGATC ATGGGATTTG TAGTCTAACA GCTTTTAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD
PF13639--zf-RING_2

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	50.97	9.00e-65	240.00
IUUC-Atr-002830	Amborella trichopoda	26.67	1.00e-12	67.40
IUUC-Apl-003293	Anas platyrhynchos	51.59	2.00e-69	255.00
IUUC-Aca-005092	Anolis carolinensis	53.20	4.00e-66	245.00
IUUC-Aly-005434	Arabidopsis lyrata	26.73	1.00e-12	66.60
IUUC-Ath-006770	Arabidopsis thaliana	28.87	4.00e-11	62.00
IUUC-Ame-011754	Astyanax mexicanus	45.31	9.00e-53	201.00
IUUC-Bta-012592	Bos taurus	50.00	6.00e-72	264.00
IUUC-Bdi-015061	Brachypodium distachyon	27.27	4.00e-13	68.90
IUUC-Bol-015743	Brassica oleracea	28.98	3.00e-12	65.90
IUUC-Bra-018072	Brassica rapa	28.98	3.00e-11	62.40
IUUC-Cel-018515	Caenorhabditis elegans	24.68	5.00e-08	51.20
IUUC-Cja-018930	Callithrix jacchus	51.59	3.00e-66	245.00
IUUC-Cfa-020156	Canis familiaris	51.36	4.00e-70	258.00
IUUC-Cpo-021290	Cavia porcellus	50.00	1.00e-66	246.00
IUUC-Csa-023214	Chlorocebus sabaeus	52.36	2.00e-71	262.00
IUUC-Cin-025416	Ciona intestinalis	33.21	5.00e-38	151.00
IUUC-Csv-026360	Ciona savignyi	29.85	1.00e-39	156.00
IUUC-Dre-028670	Danio rerio	46.40	4.00e-48	185.00
IUUC-Dno-029970	Dasypus novemcinctus	47.96	3.00e-68	252.00
IUUC-Dor-030152	Dipodomys ordii	48.43	1.00e-52	200.00
IUUC-Dme-031914	Drosophila melanogaster	36.21	2.00e-39	156.00
IUUC-Ete-033105	Echinops telfairi	52.40	2.00e-63	236.00
IUUC-Eca-033800	Equus caballus	50.97	6.00e-70	258.00
IUUC-Eeu-034525	Erinaceus europaeus	41.70	1.00e-38	153.00
IUUC-Fca-035644	Felis catus	51.59	9.00e-71	260.00
IUUC-Fal-037121	Ficedula albicollis	54.28	2.00e-76	279.00
IUUC-Gmo-039444	Gadus morhua	46.64	5.00e-56	211.00
IUUC-Gga-041221	Gallus gallus	52.57	1.00e-49	190.00
IUUC-Gac-042354	Gasterosteus aculeatus	42.56	3.00e-60	225.00
IUUC-Gma-043721	Glycine max	28.57	3.00e-13	70.10
IUUC-Ggo-044879	Gorilla gorilla	51.60	1.00e-68	253.00
IUUC-Hsa-045739	Homo sapiens	51.60	2.00e-68	253.00
IUUC-Itr-047915	Ictidomys tridecemlineatus	51.74	2.00e-65	242.00
IUUC-Kpa-049298	Komagataella pastoris	27.50	3.00e-04	39.30
IUUC-Lch-050277	Latimeria chalumnae	52.19	2.00e-60	226.00
IUUC-Lpe-051139	Leersia perrieri	26.60	1.00e-14	73.90
IUUC-Loc-052367	Lepisosteus oculatus	48.19	5.00e-16	75.10
IUUC-Laf-053559	Loxodonta africana	49.81	7.00e-71	260.00
IUUC-Mcc-055367	Macaca mulatta	51.94	3.00e-55	209.00
IUUC-Meu-056730	Macropus eugenii	52.17	2.00e-55	209.00
IUUC-Mtr-058418	Medicago truncatula	24.30	4.00e-14	72.00
IUUC-Mga-060090	Meleagris gallopavo	53.71	2.00e-47	183.00
IUUC-Mmr-060618	Microcebus murinus	49.46	8.00e-71	261.00
IUUC-Mdo-063084	Monodelphis domestica	51.78	8.00e-57	214.00
IUUC-Mmu-063854	Mus musculus	44.04	9.00e-72	263.00
IUUC-Mac-064922	Musa acuminata	25.00	6.00e-16	78.20
IUUC-Mpu-066419	Mustela putorius furo	50.40	1.00e-68	253.00
IUUC-Mlu-067289	Myotis lucifugus	51.78	1.00e-65	243.00
IUUC-Nle-069090	Nomascus leucogenys	45.69	2.00e-70	259.00
IUUC-Opr-070601	Ochotona princeps	50.38	3.00e-64	238.00
IUUC-Ont-072434	Oreochromis niloticus	45.63	2.00e-62	232.00
IUUC-Ocu-074855	Oryctolagus cuniculus	54.37	2.00e-67	249.00
IUUC-Oba-075792	Oryza barthii	25.93	5.00e-15	75.50
IUUC-Obr-076917	Oryza brachyantha	27.40	3.00e-14	72.40
IUUC-Ogl-077872	Oryza glaberrima	27.81	2.00e-13	69.70
IUUC-Ogu-078151	Oryza glumaepatula	28.97	5.00e-15	75.50
IUUC-Oin-079465	Oryza indica	28.97	3.00e-15	75.90
IUUC-Olo-080907	Oryza longistaminata	25.00	3.00e-10	60.50
IUUC-Ome-081752	Oryza meridionalis	28.67	2.00e-14	73.60
IUUC-Oni-082420	Oryza nivara	28.97	6.00e-15	75.10
IUUC-Opu-083810	Oryza punctata	28.67	8.00e-15	74.30
IUUC-Oru-085177	Oryza rufipogon	25.93	4.00e-15	75.50
IUUC-Ola-087231	Oryzias latipes	47.32	4.00e-49	187.00
IUUC-Oga-088963	Otolemur garnettii	51.57	9.00e-70	257.00
IUUC-Oar-089292	Ovis aries	49.26	2.00e-71	263.00
IUUC-Ptr-091214	Pan troglodytes	51.60	3.00e-68	252.00
IUUC-Pan-092823	Papio anubis	49.82	1.00e-71	263.00
IUUC-Psi-094084	Pelodiscus sinensis	53.45	1.00e-27	117.00
IUUC-Pfo-096406	Poecilia formosa	44.94	2.00e-59	222.00
IUUC-Pab-098212	Pongo abelii	51.20	2.00e-67	249.00
IUUC-Pop-099369	Populus trichocarpa	25.55	1.00e-10	60.80
IUUC-Pca-100897	Procavia capensis	46.06	3.00e-59	222.00
IUUC-Ppe-101702	Prunus persica	28.91	3.00e-10	59.30
IUUC-Pva-102899	Pteropus vampyrus	50.00	2.00e-71	262.00
IUUC-Rno-105369	Rattus norvegicus	50.99	2.00e-70	259.00
IUUC-Sha-107344	Sarcophilus harrisii	51.78	6.00e-57	214.00
IUUC-Smo-109636	Selaginella moellendorffii	27.10	8.00e-12	62.80
IUUC-Sit-109795	Setaria italica	27.12	2.00e-15	76.30
IUUC-Sly-111014	Solanum lycopersicum	25.90	3.00e-15	77.00
IUUC-Stu-112139	Solanum tuberosum	25.50	9.00e-16	77.40
IUUC-Sar-113487	Sorex araneus	52.88	3.00e-23	102.00
IUUC-Sbi-114714	Sorghum bicolor	26.40	1.00e-14	73.90
IUUC-Ssc-115465	Sus scrofa	51.57	2.00e-69	256.00
IUUC-Tgu-117113	Taeniopygia guttata	56.17	5.00e-74	271.00
IUUC-Tsy-119186	Tarsius syrichta	57.14	2.00e-12	67.00
IUUC-Tni-120219	Tetraodon nigroviridis	46.67	7.00e-31	125.00
IUUC-Tca-121748	Theobroma cacao	26.98	4.00e-12	65.10
IUUC-Tae-123014	Triticum aestivum	29.69	9.00e-13	67.80
IUUC-Tbe-127584	Tupaia belangeri	40.15	3.00e-40	159.00
IUUC-Ttr-128244	Tursiops truncatus	50.79	9.00e-70	257.00
IUUC-Vpa-130354	Vicugna pacos	51.18	4.00e-70	258.00
IUUC-Xma-133442	Xiphophorus maculatus	45.95	1.00e-59	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence