iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018788.2	ENSLACT00000026433.1	ENSLACP00000023492.1
ENSLACG00000018788.2	ENSLACT00000021525.1	ENSLACP00000021384.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-55	180.8	144	182
UBD/Beta-Prp	2.00e-94	316.3	99	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+tik+WD ++  +++s
   Q: 144  HINWVRCAKFsPDgRLIVSASDDKTIKIWDKTSRECIHS 182
           999********999*****************99999875 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
           ++ h+++v++v fs dg+ lvt+s+D+t+kvw +     + +l++h + v++ +fsp+g  +vs+s+d+ti++wd  +++c++  + + 
   Q: 99   FKAHTGTVRSVHFSTDGQSLVTASDDKTVKVWTVHRQRFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKIWDKTSRECIH-SFYEP 186
           589********************************************************************************.***** PP
   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
            g+vn+v +hp+g +++++++D+tv++Wd++++kll++ +  h + v+ lsf+++g++l+++s+d+t+k+ dl +g+ ++tl+gh+ + 
   Q: 187  GGFVNYVDFHPSGTCIAAAGTDNTVKVWDIRMNKLLQHYQV-HCGGVNGLSFHPTGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPA 274
           ****************************************8.*********************************************** PP
   S: 226  ksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhn......s 265
           ++v+fs+ +++++sg+sD+++ +W  + ++ d+  +l+ ++      s
   Q: 275  TCVAFSRAGDFFASGGSDEQVMVWktNFDTADYSEVLKSQQhatsvnS 322
           **************************9999999999988775554431 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MTSSLLEDPA LERHFKGHRD TITSVDFNPN MKQAATGSMD SCLMIWNMRP HMRAYRFIGH 60
KDAVMSVQFS PSGHLVASAS RDKTVRLWVP SVKGESTIFK AHTGTVRSVH FSTDGQSLVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGACGCCG TTGCTTAGAG GCGGCAGCGG CGGCGGGGAA AGCGAAGCTG AGTTGTAACC 60
GACAAGTGAC GGTTAGAAGA AGAAAGCCGG TAAATCATCG CCGCCGCCGT CAGCAACTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

lcm:102352352

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	68.14	2.00e-170	591.00
IUUC-Apl-003466	Anas platyrhynchos	75.82	0.00e+00	659.00
IUUC-Aca-004323	Anolis carolinensis	71.62	0.00e+00	650.00
IUUC-Bta-012484	Bos taurus	68.19	1.00e-178	619.00
IUUC-Cja-019067	Callithrix jacchus	67.44	8.00e-171	592.00
IUUC-Cfa-020439	Canis familiaris	68.12	1.00e-177	615.00
IUUC-Cpo-021403	Cavia porcellus	69.21	1.00e-177	615.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	52.06	9.00e-122	429.00
IUUC-Csa-023479	Chlorocebus sabaeus	68.59	5.00e-157	546.00
IUUC-Cho-024354	Choloepus hoffmanni	70.91	6.00e-97	346.00
IUUC-Cin-025258	Ciona intestinalis	59.66	2.00e-169	588.00
IUUC-Csv-025955	Ciona savignyi	62.72	1.00e-151	529.00
IUUC-Dor-030399	Dipodomys ordii	67.67	1.00e-175	608.00
IUUC-Dme-032182	Drosophila melanogaster	47.87	1.00e-84	306.00
IUUC-Eca-034425	Equus caballus	68.60	2.00e-170	591.00
IUUC-Eeu-034607	Erinaceus europaeus	58.94	9.00e-144	503.00
IUUC-Fca-035627	Felis catus	67.73	6.00e-174	603.00
IUUC-Fal-037381	Ficedula albicollis	73.11	0.00e+00	643.00
IUUC-Gmo-038489	Gadus morhua	64.08	7.00e-159	553.00
IUUC-Gga-040559	Gallus gallus	71.40	0.00e+00	625.00
IUUC-Gac-041453	Gasterosteus aculeatus	67.82	4.00e-173	600.00
IUUC-Ggo-044773	Gorilla gorilla	68.35	6.00e-173	599.00
IUUC-Hsa-045823	Homo sapiens	68.35	2.00e-172	598.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	69.07	4.00e-178	617.00
IUUC-Loc-052836	Lepisosteus oculatus	80.67	0.00e+00	738.00
IUUC-Laf-053974	Loxodonta africana	64.67	1.00e-156	546.00
IUUC-Mcc-055494	Macaca mulatta	67.65	2.00e-169	588.00
IUUC-Meu-056646	Macropus eugenii	71.09	8.00e-128	449.00
IUUC-Mga-059295	Meleagris gallopavo	68.30	3.00e-178	617.00
IUUC-Mmr-061040	Microcebus murinus	69.11	3.00e-179	620.00
IUUC-Mdo-062519	Monodelphis domestica	69.85	6.00e-170	589.00
IUUC-Mmu-063759	Mus musculus	79.86	6.00e-146	510.00
IUUC-Mpu-066442	Mustela putorius furo	67.20	4.00e-172	597.00
IUUC-Mlu-068163	Myotis lucifugus	69.53	2.00e-179	621.00
IUUC-Nle-070160	Nomascus leucogenys	67.66	1.00e-171	595.00
IUUC-Opr-070192	Ochotona princeps	67.08	1.00e-157	549.00
IUUC-Ont-072539	Oreochromis niloticus	79.17	1.00e-156	545.00
IUUC-Ocu-074624	Oryctolagus cuniculus	68.67	5.00e-163	566.00
IUUC-Ola-087268	Oryzias latipes	63.95	1.00e-165	575.00
IUUC-Oga-088964	Otolemur garnettii	65.57	3.00e-162	564.00
IUUC-Oar-090202	Ovis aries	68.98	1.00e-173	602.00
IUUC-Ptr-091164	Pan troglodytes	68.82	2.00e-172	597.00
IUUC-Pan-092805	Papio anubis	68.34	1.00e-156	545.00
IUUC-Psi-093359	Pelodiscus sinensis	85.31	1.00e-169	588.00
IUUC-Pma-094425	Petromyzon marinus	68.34	0.00e+00	630.00
IUUC-Ppa-095677	Physcomitrella patens	48.36	5.00e-88	317.00
IUUC-Pfo-096741	Poecilia formosa	60.55	3.00e-166	578.00
IUUC-Pab-098376	Pongo abelii	68.12	4.00e-177	613.00
IUUC-Pca-101122	Procavia capensis	68.14	5.00e-176	610.00
IUUC-Rno-105282	Rattus norvegicus	65.41	4.00e-150	523.00
IUUC-Sha-106840	Sarcophilus harrisii	78.42	3.00e-117	414.00
IUUC-Smo-108731	Selaginella moellendorffii	47.23	8.00e-85	306.00
IUUC-Ssc-115392	Sus scrofa	77.04	2.00e-156	544.00
IUUC-Tgu-117340	Taeniopygia guttata	70.05	1.00e-176	612.00
IUUC-Tru-117577	Takifugu rubripes	75.33	1.00e-141	496.00
IUUC-Tsy-119404	Tarsius syrichta	62.79	8.00e-160	556.00
IUUC-Tni-120713	Tetraodon nigroviridis	74.12	6.00e-145	507.00
IUUC-Tbe-127788	Tupaia belangeri	55.11	3.00e-119	421.00
IUUC-Ttr-128608	Tursiops truncatus	65.37	2.00e-167	581.00
IUUC-Xtr-132720	Xenopus tropicalis	68.76	5.00e-176	610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence