iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-047971

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01014053

Gene Name

RNF180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000012278.2	ENSSTOT00000012283.2	ENSSTOP00000011008.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	88.06	0.00e+00	1056.00	IUUC-Hsa-045752

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MKKSEELITK NHNQEEISIL RCWKCRKCIA NSDCFMNYLE NQVIKDRHDS VDVESICHVW 60
HMNIEALPEW INCLIQKAQW TVGKLNCPFC GARLGGFNFV STPKCSCGQL AAVHLSKSRT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCCTAC AGATGAAAAA AAGTGAAGAA TTGATAACTA AAAATCATAA TCAAGAAGAA 60
ATAAGTATTC TTCGTTGTTG GAAATGTAGA AAATGTATAG CAAATTCTGA TTGCTTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR033263--RNF180
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0031227--C:intrinsic component of endoplasmic reticulum membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030534--P:adult behavior
GO:0042415--P:norepinephrine metabolic process
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0000209--P:protein polyubiquitination
GO:0050790--P:regulation of catalytic activity
GO:0042428--P:serotonin metabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002250	Ailuropoda melanoleuca	85.99	0.00e+00	1047.00
IUUC-Apl-003598	Anas platyrhynchos	50.00	1.00e-140	493.00
IUUC-Aca-004364	Anolis carolinensis	46.29	5.00e-135	474.00
IUUC-Ame-011498	Astyanax mexicanus	69.28	6.00e-70	256.00
IUUC-Bta-012990	Bos taurus	84.95	0.00e+00	1033.00
IUUC-Cja-019420	Callithrix jacchus	88.06	0.00e+00	1021.00
IUUC-Cfa-020028	Canis familiaris	85.81	0.00e+00	1045.00
IUUC-Cpo-021698	Cavia porcellus	83.92	0.00e+00	847.00
IUUC-Csa-023637	Chlorocebus sabaeus	86.68	0.00e+00	1030.00
IUUC-Cho-025073	Choloepus hoffmanni	72.92	0.00e+00	853.00
IUUC-Dre-027523	Danio rerio	72.37	6.00e-70	257.00
IUUC-Dno-030040	Dasypus novemcinctus	81.82	0.00e+00	786.00
IUUC-Dor-030405	Dipodomys ordii	86.01	0.00e+00	987.00
IUUC-Eca-033366	Equus caballus	86.51	0.00e+00	1058.00
IUUC-Fca-035526	Felis catus	86.83	0.00e+00	815.00
IUUC-Fal-037590	Ficedula albicollis	47.42	1.00e-141	496.00
IUUC-Gmo-039484	Gadus morhua	52.63	2.00e-44	172.00
IUUC-Gga-040136	Gallus gallus	49.22	2.00e-153	535.00
IUUC-Gac-041811	Gasterosteus aculeatus	52.20	2.00e-43	169.00
IUUC-Ggo-044673	Gorilla gorilla	87.72	0.00e+00	1023.00
IUUC-Hsa-045752	Homo sapiens	88.06	0.00e+00	1030.00
IUUC-Lch-050309	Latimeria chalumnae	48.65	5.00e-134	471.00
IUUC-Loc-052203	Lepisosteus oculatus	44.12	6.00e-121	427.00
IUUC-Laf-053398	Loxodonta africana	85.47	0.00e+00	1036.00
IUUC-Mcc-054745	Macaca mulatta	89.45	0.00e+00	1040.00
IUUC-Mmr-060583	Microcebus murinus	88.58	0.00e+00	1073.00
IUUC-Mdo-062873	Monodelphis domestica	67.36	0.00e+00	762.00
IUUC-Mmu-063393	Mus musculus	78.59	0.00e+00	771.00
IUUC-Mac-065655	Musa acuminata	35.71	1.00e-07	50.40
IUUC-Mpu-066186	Mustela putorius furo	86.01	0.00e+00	1045.00
IUUC-Mlu-068079	Myotis lucifugus	81.72	0.00e+00	980.00
IUUC-Nle-069164	Nomascus leucogenys	88.75	0.00e+00	1032.00
IUUC-Opr-070362	Ochotona princeps	76.83	0.00e+00	891.00
IUUC-Oan-073509	Ornithorhynchus anatinus	49.78	2.00e-54	204.00
IUUC-Ocu-073894	Oryctolagus cuniculus	77.75	0.00e+00	726.00
IUUC-Oga-088485	Otolemur garnettii	86.85	0.00e+00	992.00
IUUC-Oar-089831	Ovis aries	84.95	0.00e+00	1032.00
IUUC-Ptr-091570	Pan troglodytes	88.06	0.00e+00	1029.00
IUUC-Psi-093962	Pelodiscus sinensis	55.75	0.00e+00	627.00
IUUC-Pfo-096369	Poecilia formosa	68.99	5.00e-64	237.00
IUUC-Pab-098224	Pongo abelii	72.32	0.00e+00	775.00
IUUC-Pca-100186	Procavia capensis	78.03	0.00e+00	876.00
IUUC-Pva-102511	Pteropus vampyrus	86.51	0.00e+00	1055.00
IUUC-Rno-105170	Rattus norvegicus	79.64	0.00e+00	891.00
IUUC-Sha-107501	Sarcophilus harrisii	68.32	0.00e+00	696.00
IUUC-Sja-107944	Schizosaccharomyces japonicus	46.67	2.00e-07	48.90
IUUC-Ssc-115668	Sus scrofa	86.15	0.00e+00	945.00
IUUC-Tgu-117098	Taeniopygia guttata	49.62	8.00e-142	496.00
IUUC-Tru-118625	Takifugu rubripes	71.43	2.00e-63	234.00
IUUC-Tsy-118959	Tarsius syrichta	87.54	0.00e+00	1016.00
IUUC-Tni-120324	Tetraodon nigroviridis	31.40	4.00e-64	238.00
IUUC-Tbe-127448	Tupaia belangeri	84.55	0.00e+00	882.00
IUUC-Ttr-128470	Tursiops truncatus	82.70	0.00e+00	971.00
IUUC-Vpa-130097	Vicugna pacos	83.68	0.00e+00	937.00
IUUC-Xtr-132848	Xenopus tropicalis	39.79	1.00e-106	380.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence