iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026388

Ensembl Protein ID

ELA29419

UniProt Accession

L2FSP4; L2FSP4_COLGN

Genbank Protein ID

ELA29419.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit

Genbank Nucleotide ID

KB020859

Gene Name

CGGC5_10094

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_10094	ELA29419	ELA29419

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-25	85.4	141	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+d v+c +f ++ +++vsGs+D t+k+WD+r
   Q: 141  GHQDYVRCAEFmNGtNTIVSGSYDATVKIWDPR 173
           8***********8889***************75 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MAATVGPLPQ VKLPSGPSPV TAEQRYWKSF KNQLQIPSPT SYPITHISST SSDGLFAVTT 60
GTRVQLYSSR TRKLEKTITR FADVFDTSSR SILKTWNTHK QPVWATRFSD SELTTLLSAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCTA CCGTGGGACC CCTCCCGCAG GTGAAGCTGC CCTCGGGCCC GTCCCCGGTG 60
ACGGCCGAGC AGCGCTACTG GAAGTCCTTC AAGAACCAGC TGCAGATCCC CTCGCCGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0072686--C:mitotic spindle
GO:0033553--C:rDNA heterochromatin
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0019013--C:viral nucleocapsid
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0045943--P:positive regulation of transcription from RNA polymerase I promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002117	Ailuropoda melanoleuca	29.24	2.00e-45	175.00
IUUC-Atr-003068	Amborella trichopoda	24.20	1.00e-25	108.00
IUUC-Apl-003926	Anas platyrhynchos	29.58	9.00e-48	182.00
IUUC-Aca-004271	Anolis carolinensis	30.06	2.00e-46	178.00
IUUC-Aly-005525	Arabidopsis lyrata	27.49	2.00e-34	138.00
IUUC-Ath-006954	Arabidopsis thaliana	28.99	2.00e-34	138.00
IUUC-Ago-007973	Ashbya gossypii	31.95	5.00e-57	213.00
IUUC-Acl-008287	Aspergillus clavatus	47.01	3.00e-118	417.00
IUUC-Afl-008504	Aspergillus flavus	46.46	5.00e-122	429.00
IUUC-Afu-008983	Aspergillus fumigatus	47.01	5.00e-108	383.00
IUUC-Ani-009315	Aspergillus nidulans	45.01	9.00e-102	362.00
IUUC-Ang-009690	Aspergillus niger	45.74	5.00e-113	399.00
IUUC-Aor-010181	Aspergillus oryzae	46.46	5.00e-122	429.00
IUUC-Ate-010498	Aspergillus terreus	46.11	1.00e-109	389.00
IUUC-Ame-011814	Astyanax mexicanus	29.81	1.00e-46	179.00
IUUC-Bgr-012273	Blumeria graminis	45.37	7.00e-127	445.00
IUUC-Bta-013068	Bos taurus	30.06	1.00e-46	179.00
IUUC-Bci-013930	Botrytis cinerea	51.01	1.00e-143	501.00
IUUC-Bdi-014876	Brachypodium distachyon	25.05	1.00e-27	115.00
IUUC-Bol-015366	Brassica oleracea	26.22	4.00e-31	127.00
IUUC-Bra-017589	Brassica rapa	25.74	9.00e-32	129.00
IUUC-Cel-018159	Caenorhabditis elegans	23.54	1.00e-21	96.30
IUUC-Cja-019139	Callithrix jacchus	29.10	1.00e-45	175.00
IUUC-Cfa-020742	Canis familiaris	28.80	4.00e-43	167.00
IUUC-Cpo-021707	Cavia porcellus	29.04	2.00e-44	171.00
IUUC-Cre-022665	Chlamydomonas reinhardtii	30.99	2.00e-41	161.00
IUUC-Csa-023024	Chlorocebus sabaeus	29.86	4.00e-48	184.00
IUUC-Cho-024487	Choloepus hoffmanni	31.77	5.00e-24	103.00
IUUC-Cin-025294	Ciona intestinalis	30.40	3.00e-53	201.00
IUUC-Cne-026945	Cryptococcus neoformans	31.89	7.00e-58	216.00
IUUC-Dre-028316	Danio rerio	30.39	3.00e-44	171.00
IUUC-Dno-028985	Dasypus novemcinctus	28.83	1.00e-44	172.00
IUUC-Dor-030219	Dipodomys ordii	26.16	3.00e-21	94.40
IUUC-Dse-031495	Dothistroma septosporum	39.18	3.00e-88	317.00
IUUC-Dme-031769	Drosophila melanogaster	26.26	2.00e-33	135.00
IUUC-Eca-033816	Equus caballus	29.65	4.00e-45	174.00
IUUC-Fca-035751	Felis catus	29.24	2.00e-44	171.00
IUUC-Fal-036733	Ficedula albicollis	28.94	2.00e-48	184.00
IUUC-Fox-037743	Fusarium oxysporum	61.35	1.00e-177	614.00
IUUC-Fso-038395	Fusarium solani	60.41	9.00e-177	611.00
IUUC-Gmo-038803	Gadus morhua	30.06	3.00e-43	167.00
IUUC-Ggr-040092	Gaeumannomyces graminis	46.85	1.00e-125	441.00
IUUC-Gga-040714	Gallus gallus	28.88	1.00e-50	192.00
IUUC-Gac-042640	Gasterosteus aculeatus	28.92	6.00e-52	196.00
IUUC-Gma-043711	Glycine max	32.59	2.00e-35	141.00
IUUC-Ggo-045616	Gorilla gorilla	29.39	2.00e-44	171.00
IUUC-Hsa-046720	Homo sapiens	30.24	1.00e-44	172.00
IUUC-Itr-048796	Ictidomys tridecemlineatus	29.30	2.00e-46	177.00
IUUC-Kpa-049291	Komagataella pastoris	32.03	1.00e-62	232.00
IUUC-Lch-049729	Latimeria chalumnae	29.66	4.00e-42	164.00
IUUC-Lpe-051141	Leersia perrieri	24.86	4.00e-29	120.00
IUUC-Loc-051756	Lepisosteus oculatus	30.00	7.00e-49	186.00
IUUC-Lma-053083	Leptosphaeria maculans	44.51	2.00e-107	381.00
IUUC-Laf-054067	Loxodonta africana	30.23	6.00e-44	170.00
IUUC-Mcc-055096	Macaca mulatta	29.86	4.00e-48	184.00
IUUC-Meu-056604	Macropus eugenii	27.41	4.00e-32	130.00
IUUC-Mor-057186	Magnaporthe oryzae	49.29	3.00e-137	479.00
IUUC-Mtr-058346	Medicago truncatula	26.92	3.00e-39	154.00
IUUC-Mla-059116	Melampsora laricipopulina	33.53	3.00e-62	231.00
IUUC-Mga-060038	Meleagris gallopavo	31.17	2.00e-41	160.00
IUUC-Mvi-060272	Microbotryum violaceum	30.70	7.00e-51	193.00
IUUC-Mmr-060877	Microcebus murinus	29.24	7.00e-46	176.00
IUUC-Mdo-062168	Monodelphis domestica	29.61	1.00e-41	162.00
IUUC-Mmu-063441	Mus musculus	30.27	1.00e-45	176.00
IUUC-Mac-065330	Musa acuminata	31.90	7.00e-22	97.10
IUUC-Mpu-065704	Mustela putorius furo	29.65	1.00e-45	175.00
IUUC-Mlu-067640	Myotis lucifugus	29.65	1.00e-45	175.00
IUUC-Nfi-068589	Neosartorya fischeri	47.55	7.00e-109	385.00
IUUC-Ncr-068769	Neurospora crassa	50.36	1.00e-137	481.00
IUUC-Nle-069105	Nomascus leucogenys	29.95	3.00e-41	161.00
IUUC-Opr-070203	Ochotona princeps	29.07	2.00e-51	194.00
IUUC-Ont-072054	Oreochromis niloticus	29.66	3.00e-49	187.00
IUUC-Oan-073624	Ornithorhynchus anatinus	30.72	2.00e-48	184.00
IUUC-Ocu-074326	Oryctolagus cuniculus	29.10	7.00e-44	169.00
IUUC-Obr-076038	Oryza brachyantha	25.19	4.00e-24	104.00
IUUC-Ogl-077463	Oryza glaberrima	29.34	7.00e-25	107.00
IUUC-Ogu-078631	Oryza glumaepatula	26.80	1.00e-26	112.00
IUUC-Oin-079242	Oryza indica	29.34	3.00e-25	107.00
IUUC-Olo-080652	Oryza longistaminata	26.97	2.00e-19	88.60
IUUC-Ome-081109	Oryza meridionalis	32.61	2.00e-22	99.80
IUUC-Oni-082187	Oryza nivara	29.34	3.00e-25	107.00
IUUC-Opu-083995	Oryza punctata	28.70	4.00e-24	104.00
IUUC-Oru-084962	Oryza rufipogon	30.65	8.00e-23	100.00
IUUC-Osa-086201	Oryza sativa	30.65	8.00e-23	100.00
IUUC-Ola-087115	Oryzias latipes	30.28	2.00e-50	191.00
IUUC-Olu-087842	Ostreococcus lucimarinus	29.20	2.00e-41	162.00
IUUC-Oga-088204	Otolemur garnettii	29.04	2.00e-45	174.00
IUUC-Oar-089297	Ovis aries	29.24	5.00e-46	176.00
IUUC-Ptr-090953	Pan troglodytes	29.45	4.00e-46	177.00
IUUC-Pan-092451	Papio anubis	29.59	4.00e-45	174.00
IUUC-Psi-092999	Pelodiscus sinensis	28.35	3.00e-46	177.00
IUUC-Pma-094304	Petromyzon marinus	28.09	3.00e-43	167.00
IUUC-Pno-095060	Phaeosphaeria nodorum	44.57	3.00e-101	360.00
IUUC-Ppa-095433	Physcomitrella patens	31.37	3.00e-51	194.00
IUUC-Pfo-096433	Poecilia formosa	29.42	6.00e-44	170.00
IUUC-Pab-098677	Pongo abelii	29.45	1.00e-46	179.00
IUUC-Pop-099329	Populus trichocarpa	30.32	4.00e-31	127.00
IUUC-Pca-100444	Procavia capensis	28.87	1.00e-16	79.30
IUUC-Ppe-101318	Prunus persica	24.90	1.00e-36	145.00
IUUC-Pva-102162	Pteropus vampyrus	25.82	3.00e-37	147.00
IUUC-Pgr-103329	Puccinia graminis	30.43	3.00e-57	214.00
IUUC-Ptt-103837	Puccinia triticina	30.76	6.00e-58	216.00
IUUC-Pte-104133	Pyrenophora teres	44.08	4.00e-108	383.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	43.65	4.00e-107	380.00
IUUC-Rno-105004	Rattus norvegicus	29.86	1.00e-44	172.00
IUUC-Sce-106443	Saccharomyces cerevisiae	32.04	4.00e-59	220.00
IUUC-Sha-107199	Sarcophilus harrisii	28.80	1.00e-42	165.00
IUUC-Sja-107670	Schizosaccharomyces japonicus	36.50	2.00e-81	294.00
IUUC-Spo-108125	Schizosaccharomyces pombe	33.92	1.00e-78	285.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	51.01	7.00e-144	502.00
IUUC-Smo-109588	Selaginella moellendorffii	28.24	4.00e-48	184.00
IUUC-Sit-110043	Setaria italica	28.83	3.00e-23	101.00
IUUC-Stu-112396	Solanum tuberosum	27.36	1.00e-39	155.00
IUUC-Sar-113359	Sorex araneus	30.31	5.00e-28	116.00
IUUC-Sre-114995	Sporisorium reilianum	34.60	2.00e-59	221.00
IUUC-Ssc-115397	Sus scrofa	30.06	5.00e-46	177.00
IUUC-Tgu-116834	Taeniopygia guttata	29.37	5.00e-49	187.00
IUUC-Tru-118764	Takifugu rubripes	31.01	3.00e-50	191.00
IUUC-Tsy-119118	Tarsius syrichta	28.63	1.00e-44	172.00
IUUC-Tni-120053	Tetraodon nigroviridis	29.55	4.00e-54	204.00
IUUC-Tca-121842	Theobroma cacao	26.91	6.00e-36	143.00
IUUC-Tre-122172	Trichoderma reesei	60.49	2.00e-173	600.00
IUUC-Tvi-122288	Trichoderma virens	59.18	6.00e-157	545.00
IUUC-Tae-124909	Triticum aestivum	25.00	7.00e-26	110.00
IUUC-Tme-127164	Tuber melanosporum	40.08	2.00e-88	318.00
IUUC-Tbe-127458	Tupaia belangeri	30.24	2.00e-44	171.00
IUUC-Ttr-128680	Tursiops truncatus	29.65	2.00e-39	155.00
IUUC-Uma-129508	Ustilago maydis	33.13	2.00e-53	201.00
IUUC-Vda-129696	Verticillium dahliae	58.33	1.00e-168	584.00
IUUC-Vpa-130820	Vicugna pacos	29.65	1.00e-45	176.00
IUUC-Vvi-131126	Vitis vinifera	27.40	3.00e-41	161.00
IUUC-Xtr-131826	Xenopus tropicalis	29.48	2.00e-53	201.00
IUUC-Xma-133373	Xiphophorus maculatus	29.74	3.00e-43	167.00
IUUC-Yli-134432	Yarrowia lipolytica	31.79	9.00e-62	229.00
IUUC-Zma-135241	Zea mays	28.23	4.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence