iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000017438.2	ENSCJAT00000034064.2	ENSCJAP00000032223.2
ENSCJAG00000017438.2	ENSCJAT00000034137.2	ENSCJAP00000032296.2
ENSCJAG00000017438.2	ENSCJAT00000034059.2	ENSCJAP00000032219.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-57	190.4	1700	1732
UBD/Beta-Prp	2.10e-127	425.4	723	940

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htd.svtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d ++++la  ++ ++++s++ Dgt+++WD+ 
   Q: 1700 HVDgPIWGLAThPSrDFFLSAAEDGTVRLWDIA 1732
           5553699999898889***************75 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrslsgheae.vtavkfspdgkilvtgseD..rtikvwdlstgkcvh 88
           ++gh+++ ++ ++++p k+++atg  +rd +i +wd++t k l+ l+gh ++ v+a++fs dgk lv+++ D  +ti +wd ++g+ ++
   Q: 723  YMGHDDDILC-LTIHPLKDYVATGqvGRDPSIHIWDTETIKPLSILKGHHQFgVSAIDFSADGKRLVSVGIDdsHTIVLWDWKKGEKLS 810
           5778887777.************95569******************8877644****************9999**************** PP
   S: 89   tlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           + +g +d++  ++++p+  dkl++++  +  + w    g  +         g++++ +c+v+  ++ + +sG+  + v +W  +  +l+
   Q: 811  ITRGSKDKIFVVKMNPYVpDKLITAG-IKHMKFWRKAGGGLIGRkgyiGTLGKNDTMMCAVYGWTEEMAFSGTSTGDVCIW--RDIFLV 896
           ****************9978888887.9999***88888888779998455677799************************..889*** PP
   S: 173  rtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
           +t +  h+++v s+   +  k +v+g++dg v lwd + ++c++t+ 
   Q: 897  KTVKA-HDGPVFSMHALE--KGFVTGGKDGIVALWDDSFERCLKTYA 940
           ***98.********9888..67**********************996 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MAARSAPSCH LRLEWVYGYR GHQCRNNLYY TAAKEIVYFV AGVGVVYSPR EHRQKFYRGH 60
SDDIISLALH PERVLVATGQ VGKEPYICIW DSYTVQTISV LKDVHTHGIA CLAFDLDGQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTCTCGGC CCAGCGCTAC GGGCTGAGGA GACCAGGCGA GCCGACGCGA GCGGAGGCGG 60
CGAAGGCTCG GGGCACCCAC TTGACAGCCG GCGGCGCTCG CGGCCCTCAG CATGTTTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome

KEGG

cjc:100414555

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002225	Ailuropoda melanoleuca	96.26	0.00e+00	3836.00
IUUC-Apl-003360	Anas platyrhynchos	90.91	0.00e+00	3551.00
IUUC-Ame-011681	Astyanax mexicanus	85.07	0.00e+00	3513.00
IUUC-Bta-012838	Bos taurus	95.91	0.00e+00	3873.00
IUUC-Cfa-020531	Canis familiaris	96.11	0.00e+00	3895.00
IUUC-Cpo-022304	Cavia porcellus	92.85	0.00e+00	3629.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	34.41	2.00e-100	362.00
IUUC-Csa-023621	Chlorocebus sabaeus	97.93	0.00e+00	3579.00
IUUC-Cho-024944	Choloepus hoffmanni	76.65	0.00e+00	1501.00
IUUC-Dre-028772	Danio rerio	84.62	0.00e+00	3504.00
IUUC-Dno-030063	Dasypus novemcinctus	95.21	0.00e+00	3819.00
IUUC-Dor-030980	Dipodomys ordii	86.54	0.00e+00	1575.00
IUUC-Ete-032554	Echinops telfairi	92.31	0.00e+00	1043.00
IUUC-Eca-033909	Equus caballus	96.62	0.00e+00	3577.00
IUUC-Eeu-035180	Erinaceus europaeus	78.47	0.00e+00	1458.00
IUUC-Fal-037219	Ficedula albicollis	91.28	0.00e+00	3675.00
IUUC-Gmo-039146	Gadus morhua	80.44	0.00e+00	3311.00
IUUC-Gga-041095	Gallus gallus	90.65	0.00e+00	2647.00
IUUC-Gac-041341	Gasterosteus aculeatus	83.02	0.00e+00	3398.00
IUUC-Hsa-045997	Homo sapiens	98.84	0.00e+00	3930.00
IUUC-Lch-050306	Latimeria chalumnae	84.53	0.00e+00	3175.00
IUUC-Loc-052215	Lepisosteus oculatus	84.77	0.00e+00	3541.00
IUUC-Laf-054044	Loxodonta africana	94.95	0.00e+00	3833.00
IUUC-Mcc-054733	Macaca mulatta	98.94	0.00e+00	3929.00
IUUC-Mga-059666	Meleagris gallopavo	89.68	0.00e+00	3506.00
IUUC-Mmr-060995	Microcebus murinus	97.57	0.00e+00	3889.00
IUUC-Mdo-062482	Monodelphis domestica	93.02	0.00e+00	3768.00
IUUC-Mmu-063533	Mus musculus	95.75	0.00e+00	3820.00
IUUC-Mpu-066704	Mustela putorius furo	96.21	0.00e+00	3887.00
IUUC-Mlu-067592	Myotis lucifugus	95.65	0.00e+00	3837.00
IUUC-Nle-069911	Nomascus leucogenys	98.53	0.00e+00	3916.00
IUUC-Ont-071966	Oreochromis niloticus	84.81	0.00e+00	3511.00
IUUC-Ola-086738	Oryzias latipes	84.16	0.00e+00	3461.00
IUUC-Oga-088436	Otolemur garnettii	94.76	0.00e+00	3789.00
IUUC-Oar-090153	Ovis aries	95.52	0.00e+00	3723.00
IUUC-Ptr-091008	Pan troglodytes	98.53	0.00e+00	3906.00
IUUC-Pan-092404	Papio anubis	98.48	0.00e+00	3903.00
IUUC-Psi-093417	Pelodiscus sinensis	90.34	0.00e+00	3530.00
IUUC-Pfo-096073	Poecilia formosa	84.88	0.00e+00	3516.00
IUUC-Pab-097900	Pongo abelii	98.33	0.00e+00	3910.00
IUUC-Pca-100107	Procavia capensis	80.82	0.00e+00	2543.00
IUUC-Pva-102880	Pteropus vampyrus	92.05	0.00e+00	3511.00
IUUC-Rno-106084	Rattus norvegicus	95.55	0.00e+00	3882.00
IUUC-Sha-106974	Sarcophilus harrisii	92.73	0.00e+00	3760.00
IUUC-Sar-113401	Sorex araneus	84.44	0.00e+00	1824.00
IUUC-Ssc-116057	Sus scrofa	96.04	0.00e+00	3780.00
IUUC-Tru-118444	Takifugu rubripes	83.50	0.00e+00	3429.00
IUUC-Tsy-118941	Tarsius syrichta	84.87	0.00e+00	2848.00
IUUC-Tni-120683	Tetraodon nigroviridis	83.12	0.00e+00	3280.00
IUUC-Tbe-127467	Tupaia belangeri	88.92	0.00e+00	1868.00
IUUC-Ttr-129138	Tursiops truncatus	91.89	0.00e+00	3532.00
IUUC-Vpa-130083	Vicugna pacos	90.48	0.00e+00	3444.00
IUUC-Xtr-131835	Xenopus tropicalis	88.24	0.00e+00	3657.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence