iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Cancer Mutation
TCGA	ICGC	COSMIC	CGAP
IntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	TCGA	ICGC
COSMIC	THPA	HPM
DNA & RNA Element
UTRdb	AREsite	circBase	circRNADb
CircNet	microRNA	TRANSFAC	TargetScan
RepTar	miRNAMap	SomamiR	miRcode
RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	HINT
Mentha	InWeb_IM
Disease-associated Variation
GWASdb	OMIM
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus	BioGRID
mUbiSiDa
DNA Methylation
TCGA	ICGC	COSMIC
Protein Expression/Proteomics
THPA	HPM	GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.20e-10	41.9	151	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekk 73
           ++v+ ++g++  l+ +  dtV++LK++++ ++gi p  qr+ ++Gk+L d   L++ +++ + +i ++  +
   Q: 151  LKVRLSTGKDVRLSASLPDTVGQLKRQLHAQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQ 221
           789******9999999999***********************************************98765 PP

Organism

Homo sapiens

Protein Sequence
(Fasta)

MGNCVGRQRR ERPAAPGHPR KRAGRNEPLK KERLKWKSDY PMTDGQLRSK RDEFWDTAPA 60
FEGRKEIWDA LKAAAYAAEA NDHELAQAIL DGASITLPHG TLCECYDELG NRYQLPIYCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCCTGCCT GGTGCCCCGA GCGAGCCGGG AGTAGCTGCG GCGGTGCCCG CCCCCTCTCT 60
CCGCCCCTCC AGCGGAGCTG GTCTCCGGCC GGGCACCGTC GCGGGCCCCC CTGGCCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032752--UBD
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF16455--UBD
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

KEGG

hsa:80019

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001383	Ailuropoda melanoleuca	91.00	5.00e-84	303.00
IUUC-Apl-003196	Anas platyrhynchos	83.33	3.00e-75	274.00
IUUC-Aca-004269	Anolis carolinensis	83.33	8.00e-80	289.00
IUUC-Bta-013114	Bos taurus	98.59	3.00e-97	347.00
IUUC-Cja-019457	Callithrix jacchus	99.06	4.00e-98	350.00
IUUC-Cfa-020741	Canis familiaris	98.95	6.00e-83	300.00
IUUC-Cpo-021371	Cavia porcellus	99.06	2.00e-97	348.00
IUUC-Csa-023250	Chlorocebus sabaeus	99.53	8.00e-98	349.00
IUUC-Dre-027583	Danio rerio	73.78	3.00e-87	314.00
IUUC-Dno-030068	Dasypus novemcinctus	96.71	6.00e-99	353.00
IUUC-Dor-030232	Dipodomys ordii	97.65	4.00e-97	347.00
IUUC-Eca-033708	Equus caballus	97.65	3.00e-93	334.00
IUUC-Eeu-035163	Erinaceus europaeus	97.88	2.00e-82	298.00
IUUC-Fca-035668	Felis catus	99.06	8.00e-98	349.00
IUUC-Fal-036699	Ficedula albicollis	84.88	2.00e-88	318.00
IUUC-Gmo-039077	Gadus morhua	72.57	1.00e-81	296.00
IUUC-Gga-041047	Gallus gallus	81.53	3.00e-88	317.00
IUUC-Gac-042551	Gasterosteus aculeatus	68.75	3.00e-77	281.00
IUUC-Ggo-044627	Gorilla gorilla	100.00	2.00e-98	351.00
IUUC-Itr-048767	Ictidomys tridecemlineatus	98.95	9.00e-81	292.00
IUUC-Loc-052047	Lepisosteus oculatus	80.20	2.00e-82	298.00
IUUC-Laf-053550	Loxodonta africana	99.06	2.00e-100	357.00
IUUC-Meu-056853	Macropus eugenii	79.80	1.00e-78	285.00
IUUC-Mmu-063366	Mus musculus	98.59	2.00e-97	348.00
IUUC-Mpu-066364	Mustela putorius furo	97.18	2.00e-96	345.00
IUUC-Mlu-067342	Myotis lucifugus	98.95	8.00e-85	306.00
IUUC-Nle-069026	Nomascus leucogenys	100.00	2.00e-98	351.00
IUUC-Opr-070485	Ochotona princeps	95.79	2.00e-94	338.00
IUUC-Ont-072182	Oreochromis niloticus	71.88	8.00e-80	290.00
IUUC-Oan-072707	Ornithorhynchus anatinus	84.58	4.00e-87	314.00
IUUC-Ocu-074767	Oryctolagus cuniculus	97.18	9.00e-100	355.00
IUUC-Ola-086457	Oryzias latipes	64.35	3.00e-76	278.00
IUUC-Oga-088568	Otolemur garnettii	98.95	3.00e-83	300.00
IUUC-Oar-090346	Ovis aries	98.95	2.00e-83	301.00
IUUC-Ptr-091385	Pan troglodytes	100.00	2.00e-98	351.00
IUUC-Pan-092096	Papio anubis	100.00	4.00e-84	303.00
IUUC-Pca-100398	Procavia capensis	97.65	3.00e-100	357.00
IUUC-Pva-103033	Pteropus vampyrus	99.06	8.00e-98	349.00
IUUC-Rno-104982	Rattus norvegicus	99.06	5.00e-98	350.00
IUUC-Sha-107383	Sarcophilus harrisii	88.10	8.00e-96	342.00
IUUC-Sar-113655	Sorex araneus	97.35	4.00e-82	297.00
IUUC-Ssc-116443	Sus scrofa	97.65	2.00e-100	358.00
IUUC-Tgu-116742	Taeniopygia guttata	84.14	1.00e-97	348.00
IUUC-Ttr-129064	Tursiops truncatus	97.27	2.00e-98	351.00
IUUC-Vpa-130248	Vicugna pacos	97.79	1.00e-75	275.00
IUUC-Xtr-131999	Xenopus tropicalis	74.46	9.00e-90	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence