iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020740

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03011372

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000006808.1	ENSCAFT00000010954.1	ENSCAFP00000010152.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	83.70	0.00e+00	1822.00	IUUC-Hsa-045964
E3 activity/RING/RING	81.40	0.00e+00	1773.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Canis familiaris

Protein Sequence
(Fasta)

MAVSLPPTLG LTSAPDEIQH PHIKFSEWKF KLFRVRSLEK APEEAQIEKK VSSEGKPSLE 60
QSPAVPDKAD GQEAALSPPA LKAHPKFLKE PHDDGKTRDK AIHQANLRHL CRICGNSLKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTCT CTTTGCCACC CACCCTGGGA CTCACTTCTG CCCCAGATGA GATCCAGCAC 60
CCACATATTA AATTTTCAGA ATGGAAATTT AAACTGTTCA GGGTGCGGTC TCTTGAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0002250--P:adaptive immune response
GO:0010390--P:histone monoubiquitination
GO:0043154--P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0070244--P:negative regulation of thymocyte apoptotic process
GO:0045582--P:positive regulation of T cell differentiation
GO:0002331--P:pre-B cell allelic exclusion
GO:0051865--P:protein autoubiquitination
GO:0033077--P:T cell differentiation in thymus
GO:0043029--P:T cell homeostasis
GO:0048538--P:thymus development
GO:0033151--P:V(D)J recombination

KEGG

cfa:483420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	87.34	0.00e+00	1857.00
IUUC-Apl-003271	Anas platyrhynchos	71.29	0.00e+00	1544.00
IUUC-Aca-004400	Anolis carolinensis	70.62	0.00e+00	1537.00
IUUC-Ame-011295	Astyanax mexicanus	58.12	0.00e+00	1196.00
IUUC-Bta-012421	Bos taurus	84.51	0.00e+00	1798.00
IUUC-Cja-019891	Callithrix jacchus	83.60	0.00e+00	1764.00
IUUC-Cpo-021800	Cavia porcellus	83.48	0.00e+00	1715.00
IUUC-Csa-024203	Chlorocebus sabaeus	82.07	0.00e+00	1562.00
IUUC-Cho-024926	Choloepus hoffmanni	48.94	4.00e-07	48.10
IUUC-Dre-028416	Danio rerio	58.57	0.00e+00	1170.00
IUUC-Dno-029101	Dasypus novemcinctus	82.74	0.00e+00	1742.00
IUUC-Eca-033385	Equus caballus	84.37	0.00e+00	1793.00
IUUC-Fca-036545	Felis catus	86.10	0.00e+00	1831.00
IUUC-Fal-037208	Ficedula albicollis	70.75	0.00e+00	1543.00
IUUC-Gmo-039622	Gadus morhua	65.84	0.00e+00	1063.00
IUUC-Gga-041182	Gallus gallus	70.23	0.00e+00	1490.00
IUUC-Gac-041682	Gasterosteus aculeatus	58.49	0.00e+00	1188.00
IUUC-Ggo-044510	Gorilla gorilla	83.99	0.00e+00	1790.00
IUUC-Hsa-045964	Homo sapiens	83.70	0.00e+00	1789.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	82.74	0.00e+00	1762.00
IUUC-Lch-050041	Latimeria chalumnae	66.57	0.00e+00	1395.00
IUUC-Loc-052464	Lepisosteus oculatus	62.12	0.00e+00	1335.00
IUUC-Laf-053544	Loxodonta africana	83.41	0.00e+00	1784.00
IUUC-Mcc-054867	Macaca mulatta	83.60	0.00e+00	1787.00
IUUC-Meu-055986	Macropus eugenii	75.43	0.00e+00	1465.00
IUUC-Mga-059262	Meleagris gallopavo	70.52	0.00e+00	1499.00
IUUC-Mdo-062686	Monodelphis domestica	76.12	0.00e+00	1665.00
IUUC-Mmu-064297	Mus musculus	81.40	0.00e+00	1775.00
IUUC-Mpu-066027	Mustela putorius furo	86.58	0.00e+00	1818.00
IUUC-Mlu-067885	Myotis lucifugus	85.23	0.00e+00	1810.00
IUUC-Nle-070073	Nomascus leucogenys	83.70	0.00e+00	1789.00
IUUC-Ont-071400	Oreochromis niloticus	60.92	0.00e+00	1256.00
IUUC-Oan-072920	Ornithorhynchus anatinus	91.88	0.00e+00	763.00
IUUC-Ocu-074616	Oryctolagus cuniculus	83.32	0.00e+00	1767.00
IUUC-Ola-086828	Oryzias latipes	59.94	0.00e+00	1223.00
IUUC-Oga-088675	Otolemur garnettii	88.19	8.00e-144	502.00
IUUC-Oar-090380	Ovis aries	84.28	0.00e+00	1806.00
IUUC-Ptr-090648	Pan troglodytes	83.70	0.00e+00	1790.00
IUUC-Pan-092036	Papio anubis	83.51	0.00e+00	1783.00
IUUC-Psi-093130	Pelodiscus sinensis	73.97	0.00e+00	1610.00
IUUC-Pfo-097273	Poecilia formosa	59.50	0.00e+00	1210.00
IUUC-Pca-100134	Procavia capensis	79.41	0.00e+00	1664.00
IUUC-Rno-105632	Rattus norvegicus	81.50	0.00e+00	1768.00
IUUC-Sha-107238	Sarcophilus harrisii	77.27	0.00e+00	1691.00
IUUC-Sar-113591	Sorex araneus	74.90	0.00e+00	1531.00
IUUC-Ssc-115720	Sus scrofa	83.51	0.00e+00	1774.00
IUUC-Tgu-117030	Taeniopygia guttata	71.78	0.00e+00	1528.00
IUUC-Tru-117669	Takifugu rubripes	57.06	0.00e+00	1121.00
IUUC-Tsy-119578	Tarsius syrichta	81.59	0.00e+00	1731.00
IUUC-Tni-120073	Tetraodon nigroviridis	58.00	0.00e+00	1174.00
IUUC-Tbe-128029	Tupaia belangeri	77.70	0.00e+00	861.00
IUUC-Ttr-128677	Tursiops truncatus	88.19	0.00e+00	768.00
IUUC-Vpa-130346	Vicugna pacos	89.34	0.00e+00	835.00
IUUC-Xtr-132442	Xenopus tropicalis	84.54	2.00e-97	347.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence