iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-070073

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01113492

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000017951.1	ENSNLET00000022907.1	ENSNLEP00000021806.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	98.37	0.00e+00	2075.00	IUUC-Hsa-045964
E3 activity/RING/RING	89.26	0.00e+00	1905.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAASFPPTLG LSSAPDEIQH PHIKFSEWKF KLFRVRSFEK TPEEAQKEKK DSFEGKPSLE 60
QSPPVLDKAE GQKPVPTQPL LKAHPKFSKK FHDNGKARGK AIHQANLRHL CRICGNSFKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACCAAGG AGAGAGCAGA GAACACACTT TGCCTTCTCT GTGGTATTGA GTAATATCAA 60
CCAAACTGCA GACATCTCAA CACTTTGGCC AGGCAGCCTG CTGAGCAAGG TAACACTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0033151--P:V(D)J recombination

KEGG

nle:100595879

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	91.56	0.00e+00	1949.00
IUUC-Apl-003271	Anas platyrhynchos	76.81	0.00e+00	1669.00
IUUC-Aca-004400	Anolis carolinensis	74.47	0.00e+00	1635.00
IUUC-Ame-011295	Astyanax mexicanus	58.01	0.00e+00	1208.00
IUUC-Bta-012421	Bos taurus	91.37	0.00e+00	1938.00
IUUC-Cja-019891	Callithrix jacchus	95.59	0.00e+00	1996.00
IUUC-Cfa-020740	Canis familiaris	83.70	0.00e+00	1824.00
IUUC-Cpo-021800	Cavia porcellus	90.18	0.00e+00	1843.00
IUUC-Csa-024203	Chlorocebus sabaeus	96.37	0.00e+00	1817.00
IUUC-Cho-024926	Choloepus hoffmanni	46.81	5.00e-07	47.80
IUUC-Dre-028416	Danio rerio	58.58	0.00e+00	1206.00
IUUC-Dno-029101	Dasypus novemcinctus	91.05	0.00e+00	1903.00
IUUC-Eca-033385	Equus caballus	92.81	0.00e+00	1956.00
IUUC-Fca-036545	Felis catus	91.47	0.00e+00	1956.00
IUUC-Fal-037208	Ficedula albicollis	76.06	0.00e+00	1668.00
IUUC-Gmo-039622	Gadus morhua	54.95	0.00e+00	1169.00
IUUC-Gga-041182	Gallus gallus	75.94	0.00e+00	1619.00
IUUC-Gac-041682	Gasterosteus aculeatus	57.16	0.00e+00	1207.00
IUUC-Ggo-044510	Gorilla gorilla	98.18	0.00e+00	2072.00
IUUC-Hsa-045964	Homo sapiens	98.37	0.00e+00	2074.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	92.04	0.00e+00	1939.00
IUUC-Lch-050041	Latimeria chalumnae	69.57	0.00e+00	1479.00
IUUC-Loc-052464	Lepisosteus oculatus	64.04	0.00e+00	1370.00
IUUC-Laf-053544	Loxodonta africana	92.04	0.00e+00	1950.00
IUUC-Mcc-054867	Macaca mulatta	97.32	0.00e+00	2058.00
IUUC-Meu-055986	Macropus eugenii	82.16	0.00e+00	1611.00
IUUC-Mga-059262	Meleagris gallopavo	76.43	0.00e+00	1632.00
IUUC-Mdo-062686	Monodelphis domestica	81.76	0.00e+00	1791.00
IUUC-Mmu-064297	Mus musculus	89.45	0.00e+00	1942.00
IUUC-Mpu-066027	Mustela putorius furo	91.66	0.00e+00	1927.00
IUUC-Mlu-067885	Myotis lucifugus	92.43	0.00e+00	1965.00
IUUC-Ont-071400	Oreochromis niloticus	59.98	0.00e+00	1266.00
IUUC-Oan-072920	Ornithorhynchus anatinus	94.42	0.00e+00	785.00
IUUC-Ocu-074616	Oryctolagus cuniculus	93.29	0.00e+00	1947.00
IUUC-Ola-086828	Oryzias latipes	59.86	0.00e+00	1238.00
IUUC-Oga-088675	Otolemur garnettii	94.10	1.00e-154	538.00
IUUC-Oar-090380	Ovis aries	90.99	0.00e+00	1950.00
IUUC-Ptr-090648	Pan troglodytes	98.47	0.00e+00	2077.00
IUUC-Pan-092036	Papio anubis	97.22	0.00e+00	2056.00
IUUC-Psi-093130	Pelodiscus sinensis	80.40	0.00e+00	1759.00
IUUC-Pfo-097273	Poecilia formosa	60.06	0.00e+00	1226.00
IUUC-Pca-100134	Procavia capensis	85.73	0.00e+00	1789.00
IUUC-Rno-105632	Rattus norvegicus	89.74	0.00e+00	1943.00
IUUC-Sha-107238	Sarcophilus harrisii	81.47	0.00e+00	1790.00
IUUC-Sar-113591	Sorex araneus	79.30	0.00e+00	1638.00
IUUC-Ssc-115720	Sus scrofa	91.28	0.00e+00	1922.00
IUUC-Tgu-117030	Taeniopygia guttata	76.11	0.00e+00	1643.00
IUUC-Tru-117669	Takifugu rubripes	57.50	0.00e+00	1150.00
IUUC-Tsy-119578	Tarsius syrichta	88.59	0.00e+00	1896.00
IUUC-Tni-120073	Tetraodon nigroviridis	58.16	0.00e+00	1192.00
IUUC-Tbe-128029	Tupaia belangeri	86.33	0.00e+00	982.00
IUUC-Ttr-128677	Tursiops truncatus	94.46	0.00e+00	814.00
IUUC-Vpa-130346	Vicugna pacos	95.03	0.00e+00	883.00
IUUC-Xtr-132442	Xenopus tropicalis	85.57	3.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence