iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oru-084875

Ensembl Protein ID

ORUFI07G13810.1

UniProt Accession

A0A0E0Q7X8; A0A0E0Q7X8_ORYRU

Protein Name

Ubiquitin-related modifier 1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORUFI07G13810	ORUFI07G13810.1	ORUFI07G13810.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_Other	51.06	4.00e-09	53.90	IUUC-Sce-106366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza rufipogon

Functional Description
(View)

Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.

Protein Sequence
(Fasta)

MKGLLAWVKS NLIKERPEMF LKGDSVYFLR FTTRPGVLVL INDCDWELCG GLDAELEEKD 60
VVVFISTLHG G 71

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGAGGGCTG GAGCTGCTCC TGGAGAAGTC CACCAAGGTG CACAAGGTGG ACCTCCAGCC 60
CAACGACGGC GATGGGAAGG TGACGCCCGC CCGCCTCGAC GGAGCCGCGC CGCGTGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway

Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1

Pfam

PF09138--Urm1

Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002254	Ailuropoda melanoleuca	59.15	6.00e-21	91.70
IUUC-Atr-003089	Amborella trichopoda	70.42	3.00e-25	105.00
IUUC-Apl-003382	Anas platyrhynchos	59.15	1.00e-20	90.50
IUUC-Aca-004981	Anolis carolinensis	60.56	1.00e-20	90.50
IUUC-Aly-005517	Arabidopsis lyrata	70.42	6.00e-25	104.00
IUUC-Ath-006718	Arabidopsis thaliana	71.83	1.00e-25	107.00
IUUC-Ago-007917	Ashbya gossypii	45.59	5.00e-12	61.60
IUUC-Acl-008054	Aspergillus clavatus	50.88	2.00e-10	56.60
IUUC-Afl-008704	Aspergillus flavus	50.72	1.00e-12	63.50
IUUC-Aor-009890	Aspergillus oryzae	50.72	2.00e-12	63.90
IUUC-Bta-012448	Bos taurus	59.15	5.00e-21	91.70
IUUC-Bci-013865	Botrytis cinerea	51.79	1.00e-10	57.80
IUUC-Bdi-014980	Brachypodium distachyon	85.92	6.00e-30	121.00
IUUC-Bol-016055	Brassica oleracea	67.61	3.00e-24	102.00
IUUC-Bra-016845	Brassica rapa	67.61	3.00e-24	102.00
IUUC-Cel-018485	Caenorhabditis elegans	35.62	7.00e-07	44.70
IUUC-Cja-019587	Callithrix jacchus	60.56	4.00e-21	92.00
IUUC-Cfa-020653	Canis familiaris	57.75	7.00e-21	91.30
IUUC-Cpo-021622	Cavia porcellus	60.56	4.00e-21	92.00
IUUC-Cre-023015	Chlamydomonas reinhardtii	55.88	3.00e-19	85.90
IUUC-Csa-023756	Chlorocebus sabaeus	60.42	2.00e-12	63.90
IUUC-Cgl-026518	Colletotrichum gloeosporioides	42.03	2.00e-08	50.40
IUUC-Cne-026953	Cryptococcus neoformans	56.34	3.00e-17	80.50
IUUC-Cme-027314	Cyanidioschyzon merolae	48.53	2.00e-14	69.30
IUUC-Dre-027884	Danio rerio	63.38	3.00e-22	95.50
IUUC-Dno-029262	Dasypus novemcinctus	60.00	2.00e-12	64.70
IUUC-Dor-030601	Dipodomys ordii	54.93	1.00e-15	73.90
IUUC-Dme-031893	Drosophila melanogaster	57.75	4.00e-19	85.50
IUUC-Ete-032773	Echinops telfairi	57.75	1.00e-20	90.50
IUUC-Eca-034187	Equus caballus	59.15	5.00e-21	91.70
IUUC-Eeu-034808	Erinaceus europaeus	56.34	2.00e-20	90.10
IUUC-Fca-036107	Felis catus	57.75	1.00e-20	90.50
IUUC-Fal-036607	Ficedula albicollis	57.75	7.00e-20	87.40
IUUC-Fox-037698	Fusarium oxysporum	52.17	3.00e-09	52.80
IUUC-Gmo-039492	Gadus morhua	64.79	1.00e-21	93.60
IUUC-Ggr-039965	Gaeumannomyces graminis	57.89	3.00e-08	50.40
IUUC-Gga-041268	Gallus gallus	59.15	1.00e-20	90.10
IUUC-Gac-042111	Gasterosteus aculeatus	60.56	7.00e-21	91.30
IUUC-Gma-043240	Glycine max	71.83	3.00e-25	105.00
IUUC-Ggo-045176	Gorilla gorilla	64.71	2.00e-07	47.40
IUUC-Hsa-046077	Homo sapiens	63.16	5.00e-16	75.10
IUUC-Itr-048111	Ictidomys tridecemlineatus	64.91	2.00e-16	75.90
IUUC-Kpa-049157	Komagataella pastoris	44.29	1.00e-11	60.10
IUUC-Lch-049889	Latimeria chalumnae	56.34	1.00e-19	87.00
IUUC-Lpe-050783	Leersia perrieri	88.57	4.00e-30	121.00
IUUC-Loc-052400	Lepisosteus oculatus	61.97	4.00e-21	92.00
IUUC-Lma-053259	Leptosphaeria maculans	53.19	1.00e-09	54.30
IUUC-Laf-053596	Loxodonta africana	58.90	1.00e-19	87.40
IUUC-Mcc-054845	Macaca mulatta	60.56	2.00e-21	92.80
IUUC-Meu-055968	Macropus eugenii	57.75	1.00e-20	90.10
IUUC-Mor-057126	Magnaporthe oryzae	54.35	4.00e-09	52.80
IUUC-Mpo-057311	Magnaporthe poae	50.00	2.00e-08	50.40
IUUC-Mtr-058266	Medicago truncatula	74.65	3.00e-26	108.00
IUUC-Mla-058847	Melampsora laricipopulina	57.50	1.00e-07	47.80
IUUC-Mga-059468	Meleagris gallopavo	59.15	1.00e-20	90.10
IUUC-Mvi-060235	Microbotryum violaceum	58.93	3.00e-12	63.90
IUUC-Mdo-061948	Monodelphis domestica	57.75	1.00e-20	90.50
IUUC-Mmu-063946	Mus musculus	59.15	9.00e-21	90.90
IUUC-Mac-064812	Musa acuminata	78.87	6.00e-27	111.00
IUUC-Mpu-066763	Mustela putorius furo	59.15	6.00e-21	91.30
IUUC-Mlu-066970	Myotis lucifugus	59.18	1.00e-12	63.20
IUUC-Ncr-068824	Neurospora crassa	60.53	9.00e-08	48.10
IUUC-Nle-069849	Nomascus leucogenys	60.42	3.00e-12	63.50
IUUC-Opr-070227	Ochotona princeps	60.56	4.00e-21	92.00
IUUC-Ont-072530	Oreochromis niloticus	63.38	9.00e-22	94.40
IUUC-Oan-073191	Ornithorhynchus anatinus	59.15	1.00e-20	90.50
IUUC-Ocu-074460	Oryctolagus cuniculus	57.75	1.00e-20	90.50
IUUC-Oba-075499	Oryza barthii	90.14	1.00e-30	125.00
IUUC-Obr-076896	Oryza brachyantha	85.92	1.00e-29	122.00
IUUC-Ogl-077834	Oryza glaberrima	90.14	7.00e-31	124.00
IUUC-Ogu-078622	Oryza glumaepatula	90.14	7.00e-31	124.00
IUUC-Oin-079358	Oryza indica	90.14	7.00e-31	126.00
IUUC-Olo-081035	Oryza longistaminata	90.14	1.00e-30	125.00
IUUC-Oni-082425	Oryza nivara	90.14	7.00e-31	124.00
IUUC-Opu-083461	Oryza punctata	90.00	7.00e-30	122.00
IUUC-Oga-089128	Otolemur garnettii	59.15	3.00e-21	92.40
IUUC-Oar-089896	Ovis aries	59.15	5.00e-21	91.70
IUUC-Ptr-091618	Pan troglodytes	64.71	2.00e-07	47.40
IUUC-Pan-092238	Papio anubis	60.42	3.00e-12	63.90
IUUC-Psi-093879	Pelodiscus sinensis	60.56	1.00e-20	90.50
IUUC-Pma-094484	Petromyzon marinus	59.15	2.00e-20	89.40
IUUC-Ppa-095801	Physcomitrella patens	67.61	1.00e-22	96.70
IUUC-Pfo-097192	Poecilia formosa	60.56	1.00e-20	90.10
IUUC-Pab-098203	Pongo abelii	63.16	5.00e-16	75.10
IUUC-Pop-099614	Populus trichocarpa	74.65	2.00e-25	105.00
IUUC-Pca-100507	Procavia capensis	57.14	2.00e-12	62.80
IUUC-Ppe-101174	Prunus persica	71.83	2.00e-25	106.00
IUUC-Pva-102735	Pteropus vampyrus	59.15	1.00e-20	90.10
IUUC-Pgr-103510	Puccinia graminis	57.50	3.00e-07	46.60
IUUC-Ptt-103918	Puccinia triticina	57.50	1.00e-07	48.10
IUUC-Pte-104173	Pyrenophora teres	40.58	1.00e-09	53.90
IUUC-Pyt-104806	Pyrenophora triticirepentis	40.58	2.00e-09	53.50
IUUC-Rno-105820	Rattus norvegicus	59.15	5.00e-21	91.70
IUUC-Sce-106366	Saccharomyces cerevisiae	51.06	1.00e-09	53.90
IUUC-Sja-107727	Schizosaccharomyces japonicus	50.00	2.00e-08	50.10
IUUC-Spo-108074	Schizosaccharomyces pombe	49.15	4.00e-07	45.40
IUUC-Smo-108944	Selaginella moellendorffii	66.18	8.00e-20	87.40
IUUC-Sit-110277	Setaria italica	85.92	6.00e-30	121.00
IUUC-Sly-111505	Solanum lycopersicum	70.42	7.00e-24	100.00
IUUC-Stu-112076	Solanum tuberosum	70.42	7.00e-24	100.00
IUUC-Sbi-114274	Sorghum bicolor	83.10	2.00e-29	119.00
IUUC-Sre-114953	Sporisorium reilianum	55.88	4.00e-15	72.40
IUUC-Ssc-115418	Sus scrofa	59.15	6.00e-21	91.70
IUUC-Tgu-117311	Taeniopygia guttata	59.15	5.00e-20	88.20
IUUC-Tru-118598	Takifugu rubripes	60.56	2.00e-20	89.70
IUUC-Tni-120109	Tetraodon nigroviridis	57.75	1.00e-18	84.00
IUUC-Tca-120942	Theobroma cacao	71.83	7.00e-25	104.00
IUUC-Tre-122099	Trichoderma reesei	54.35	5.00e-07	45.10
IUUC-Tvi-122285	Trichoderma virens	44.93	4.00e-07	45.80
IUUC-Tae-125193	Triticum aestivum	83.10	4.00e-29	118.00
IUUC-Tur-126677	Triticum urartu	78.95	2.00e-29	119.00
IUUC-Tme-127120	Tuber melanosporum	48.00	2.00e-09	53.10
IUUC-Tbe-128050	Tupaia belangeri	71.05	5.00e-12	61.60
IUUC-Ttr-129019	Tursiops truncatus	57.75	1.00e-20	90.10
IUUC-Uma-129483	Ustilago maydis	55.88	6.00e-15	71.60
IUUC-Vda-129690	Verticillium dahliae	63.16	5.00e-09	52.00
IUUC-Vvi-131174	Vitis vinifera	74.65	3.00e-26	108.00
IUUC-Xma-133862	Xiphophorus maculatus	60.56	1.00e-20	90.10
IUUC-Yli-134398	Yarrowia lipolytica	52.00	1.00e-10	57.00
IUUC-Zma-134964	Zea mays	84.51	1.00e-28	117.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence