iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000020836.15	ENSMUST00000102493.7	ENSMUSP00000099551.1
ENSMUSG00000020836.15	ENSMUST00000021190.8	ENSMUSP00000021190.2
ENSMUSG00000020836.15	ENSMUST00000079770.2	ENSMUSP00000078703.2
ENSMUSG00000020836.15	ENSMUST00000052515.11	ENSMUSP00000056862.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
IID	Mentha
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus	dbPTM
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-16	60.3	79	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWD 29
           gHt++v ++++   +d+ ++s+sdD t++vW 
   Q: 79   GHTGPVLDIDWcphNDNVIASASDDTTVMVWQ 110
           8***********9877***************7 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MSRRVVRQSK FRHVFGQAAK ADQAYEDIRV SKVTWDSAFC AVNPKFLAII VEAGGGGAFI 60
VLPLAKTGRV DKNYPLVTGH TGPVLDIDWC PHNDNVIASA SDDTTVMVWQ IPDYTPVRNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGTATGCG AGGGACGGTG GCAGACACGA GGCACGAACA CCCCGCCAGC GCACGCACAC 60
TTACTTTTCC CTTTTTACAG CGGAGTTGAG ACGCCCGCCG GACTTTCGCG CGCTGGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027337--CORO6
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization

KEGG

mmu:216961

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001462	Ailuropoda melanoleuca	90.74	0.00e+00	899.00
IUUC-Aca-005215	Anolis carolinensis	81.78	0.00e+00	808.00
IUUC-Ago-007901	Ashbya gossypii	40.63	2.00e-90	326.00
IUUC-Ame-011142	Astyanax mexicanus	72.40	0.00e+00	746.00
IUUC-Bgr-011990	Blumeria graminis	41.04	2.00e-99	356.00
IUUC-Bta-013160	Bos taurus	87.69	0.00e+00	848.00
IUUC-Cel-018669	Caenorhabditis elegans	53.68	4.00e-117	415.00
IUUC-Cja-019934	Callithrix jacchus	92.78	0.00e+00	920.00
IUUC-Cfa-020414	Canis familiaris	92.99	0.00e+00	923.00
IUUC-Cpo-022256	Cavia porcellus	95.54	0.00e+00	945.00
IUUC-Csa-023319	Chlorocebus sabaeus	92.99	0.00e+00	897.00
IUUC-Dor-030506	Dipodomys ordii	92.78	0.00e+00	921.00
IUUC-Eca-033550	Equus caballus	96.40	0.00e+00	947.00
IUUC-Eeu-035286	Erinaceus europaeus	90.94	6.00e-165	572.00
IUUC-Fca-035787	Felis catus	95.55	0.00e+00	942.00
IUUC-Fal-036912	Ficedula albicollis	80.47	0.00e+00	816.00
IUUC-Gmo-038645	Gadus morhua	71.13	0.00e+00	727.00
IUUC-Gga-040968	Gallus gallus	79.41	0.00e+00	796.00
IUUC-Gac-042489	Gasterosteus aculeatus	69.70	0.00e+00	706.00
IUUC-Ggo-044731	Gorilla gorilla	93.21	0.00e+00	922.00
IUUC-Hsa-046725	Homo sapiens	93.43	0.00e+00	924.00
IUUC-Itr-048296	Ictidomys tridecemlineatus	91.31	0.00e+00	898.00
IUUC-Kpa-049089	Komagataella pastoris	43.28	1.00e-94	340.00
IUUC-Loc-052779	Lepisosteus oculatus	70.51	0.00e+00	724.00
IUUC-Laf-054086	Loxodonta africana	91.53	0.00e+00	910.00
IUUC-Mcc-055571	Macaca mulatta	96.18	0.00e+00	924.00
IUUC-Mga-059353	Meleagris gallopavo	79.91	0.00e+00	810.00
IUUC-Mmr-060830	Microcebus murinus	92.37	0.00e+00	916.00
IUUC-Mdo-062184	Monodelphis domestica	86.29	0.00e+00	838.00
IUUC-Mpu-066824	Mustela putorius furo	93.21	0.00e+00	926.00
IUUC-Mlu-066994	Myotis lucifugus	94.69	0.00e+00	935.00
IUUC-Nle-069218	Nomascus leucogenys	93.43	0.00e+00	924.00
IUUC-Opr-071137	Ochotona princeps	93.84	0.00e+00	929.00
IUUC-Ont-071691	Oreochromis niloticus	71.76	0.00e+00	714.00
IUUC-Oan-073671	Ornithorhynchus anatinus	80.72	0.00e+00	751.00
IUUC-Ocu-074167	Oryctolagus cuniculus	92.99	0.00e+00	922.00
IUUC-Ola-086676	Oryzias latipes	69.20	0.00e+00	725.00
IUUC-Oga-088077	Otolemur garnettii	92.99	0.00e+00	924.00
IUUC-Oar-089260	Ovis aries	92.57	0.00e+00	919.00
IUUC-Ptr-090488	Pan troglodytes	93.42	0.00e+00	923.00
IUUC-Pan-091682	Papio anubis	92.80	0.00e+00	892.00
IUUC-Pfo-096186	Poecilia formosa	70.91	0.00e+00	707.00
IUUC-Pab-098768	Pongo abelii	88.11	0.00e+00	851.00
IUUC-Pca-100926	Procavia capensis	87.08	0.00e+00	766.00
IUUC-Pva-102483	Pteropus vampyrus	88.54	0.00e+00	854.00
IUUC-Rno-104937	Rattus norvegicus	95.55	0.00e+00	899.00
IUUC-Sce-106378	Saccharomyces cerevisiae	41.09	3.00e-92	332.00
IUUC-Sja-107992	Schizosaccharomyces japonicus	42.82	9.00e-98	351.00
IUUC-Ssc-116384	Sus scrofa	81.05	0.00e+00	756.00
IUUC-Tgu-117038	Taeniopygia guttata	81.07	0.00e+00	746.00
IUUC-Tru-118281	Takifugu rubripes	68.61	0.00e+00	706.00
IUUC-Tbe-127703	Tupaia belangeri	88.30	0.00e+00	642.00
IUUC-Ttr-128355	Tursiops truncatus	90.02	0.00e+00	870.00
IUUC-Vda-129792	Verticillium dahliae	41.94	6.00e-94	338.00
IUUC-Xtr-132642	Xenopus tropicalis	70.19	0.00e+00	713.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence