iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UFD/UBX	UBX	17880284

Classification

Family	E-value	Score	Start	End
ULD/UDP/UFD/UBX	1.60e-13	51.9	108	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 5    qatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsllv 79
           +a +++R+pd+++l+ +F++s++++ +++ v++   +++ pF L+++ P++++k+ ++     +ag+vp +++++
   Q: 108  KAVIRVRFPDNHTLEATFHPSEKIQGLIDLVKRVVAHPDVPFYLYTTPPKKQIKDFSQ--DFYSAGFVPGAIVYF 180
           899*******************************************************..9**********9976 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Regulates CDC48A by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer.

Protein Sequence
(Fasta)

MFVDDPSLHT LKRRRLEITD SMEASSSAQA KIADMREKLG REVRVFETSS ISQRPSQVSS 60
ADDESDDFYE FTPADFYRLL ATKKEDKSLK TRKIREAEEA ARRSKLTKAV IRVRFPDNHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGGGGAAA AATTAGATAG AAGAAAGAGG GGTCAAAAAA ATGAAAATAA GAAAGAGGGC 60
TTATCTGTAA AAAAAACAAA ACATACTGTG CTTAAATTGA AAATCACCTA AAACAAAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0051117--F:ATPase binding
GO:0035265--P:organ growth
GO:0043241--P:protein complex disassembly

KEGG

ath:AT3G27310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000698	Aegilops tauschii	48.79	8.00e-46	176.00
IUUC-Aml-001972	Ailuropoda melanoleuca	34.13	5.00e-18	85.10
IUUC-Atr-002652	Amborella trichopoda	49.78	5.00e-55	206.00
IUUC-Apl-003798	Anas platyrhynchos	33.33	2.00e-17	82.80
IUUC-Aca-004974	Anolis carolinensis	35.34	2.00e-15	76.60
IUUC-Aly-005873	Arabidopsis lyrata	93.63	3.00e-116	410.00
IUUC-Ago-007968	Ashbya gossypii	25.36	2.00e-08	53.10
IUUC-Ame-011408	Astyanax mexicanus	33.64	1.00e-12	67.40
IUUC-Bgr-012185	Blumeria graminis	26.97	7.00e-04	38.10
IUUC-Bta-013229	Bos taurus	35.66	5.00e-20	91.70
IUUC-Bci-013663	Botrytis cinerea	30.36	5.00e-03	35.40
IUUC-Bdi-014106	Brachypodium distachyon	50.51	3.00e-51	194.00
IUUC-Bol-016462	Brassica oleracea	78.21	4.00e-95	340.00
IUUC-Bra-016945	Brassica rapa	77.43	5.00e-89	320.00
IUUC-Cja-018972	Callithrix jacchus	36.70	3.00e-16	79.70
IUUC-Cfa-020042	Canis familiaris	34.92	1.00e-18	87.00
IUUC-Cpo-022330	Cavia porcellus	33.60	8.00e-18	84.30
IUUC-Csa-023061	Chlorocebus sabaeus	34.97	1.00e-18	87.40
IUUC-Cin-025714	Ciona intestinalis	40.16	8.00e-19	87.80
IUUC-Csv-025969	Ciona savignyi	41.98	4.00e-22	97.80
IUUC-Cgl-026666	Colletotrichum gloeosporioides	33.33	6.40e+00	26.60
IUUC-Cme-027320	Cyanidioschyzon merolae	28.00	1.00e-09	58.20
IUUC-Dre-027590	Danio rerio	35.05	1.00e-14	72.40
IUUC-Dno-030001	Dasypus novemcinctus	33.80	6.00e-19	87.40
IUUC-Dor-030212	Dipodomys ordii	28.57	8.00e-09	54.70
IUUC-Dse-031476	Dothistroma septosporum	23.73	4.10e-02	32.30
IUUC-Dme-032123	Drosophila melanogaster	32.58	4.00e-14	72.00
IUUC-Eca-033956	Equus caballus	32.87	1.00e-17	84.00
IUUC-Eeu-034437	Erinaceus europaeus	33.94	4.00e-13	68.60
IUUC-Fca-036486	Felis catus	34.92	1.00e-18	87.40
IUUC-Fal-037419	Ficedula albicollis	35.79	1.00e-14	73.60
IUUC-Fox-037927	Fusarium oxysporum	37.70	1.00e-05	43.90
IUUC-Fso-038161	Fusarium solani	37.50	5.00e-05	42.00
IUUC-Gmo-039169	Gadus morhua	30.32	3.00e-16	79.00
IUUC-Gga-040858	Gallus gallus	32.62	9.00e-18	84.30
IUUC-Gac-042005	Gasterosteus aculeatus	28.17	9.00e-15	74.30
IUUC-Gma-042963	Glycine max	61.75	1.00e-70	258.00
IUUC-Hsa-046613	Homo sapiens	35.78	3.00e-14	72.80
IUUC-Hvu-047419	Hordeum vulgare	58.42	2.00e-30	123.00
IUUC-Itr-049012	Ictidomys tridecemlineatus	30.39	2.00e-18	86.70
IUUC-Kpa-049217	Komagataella pastoris	43.48	4.00e-01	28.10
IUUC-Lch-050340	Latimeria chalumnae	32.81	1.00e-17	84.00
IUUC-Lpe-050814	Leersia perrieri	48.51	9.00e-50	189.00
IUUC-Loc-052372	Lepisosteus oculatus	34.64	2.00e-19	89.70
IUUC-Lma-053308	Leptosphaeria maculans	28.03	2.00e-05	43.50
IUUC-Mcc-055837	Macaca mulatta	33.58	1.00e-18	87.40
IUUC-Meu-056520	Macropus eugenii	29.13	2.00e-08	53.10
IUUC-Mor-057043	Magnaporthe oryzae	44.19	7.00e-05	41.60
IUUC-Mtr-057638	Medicago truncatula	62.29	5.00e-54	202.00
IUUC-Mvi-060506	Microbotryum violaceum	30.70	6.00e-07	47.40
IUUC-Mmr-060594	Microcebus murinus	34.13	6.00e-18	85.10
IUUC-Mdo-063086	Monodelphis domestica	32.81	5.00e-18	85.10
IUUC-Mmu-064361	Mus musculus	29.05	6.00e-19	88.20
IUUC-Mac-065333	Musa acuminata	55.38	7.00e-53	199.00
IUUC-Mpu-066836	Mustela putorius furo	34.92	8.00e-18	84.30
IUUC-Mlu-067180	Myotis lucifugus	35.78	2.00e-14	73.20
IUUC-Ncr-068683	Neurospora crassa	40.43	3.00e-04	39.70
IUUC-Opr-070793	Ochotona princeps	33.03	1.00e-12	67.40
IUUC-Ont-071540	Oreochromis niloticus	33.33	9.00e-18	84.70
IUUC-Oba-074998	Oryza barthii	49.26	2.00e-50	191.00
IUUC-Obr-076489	Oryza brachyantha	45.92	3.00e-50	191.00
IUUC-Ogl-077919	Oryza glaberrima	49.26	2.00e-50	191.00
IUUC-Ogu-078747	Oryza glumaepatula	46.95	1.00e-48	186.00
IUUC-Oin-080147	Oryza indica	49.26	2.00e-50	191.00
IUUC-Olo-080748	Oryza longistaminata	48.08	1.00e-48	187.00
IUUC-Ome-081379	Oryza meridionalis	69.44	1.00e-09	55.10
IUUC-Oni-082994	Oryza nivara	47.42	2.00e-49	189.00
IUUC-Opu-083874	Oryza punctata	44.49	1.00e-49	189.00
IUUC-Oru-084505	Oryza rufipogon	47.42	1.00e-49	189.00
IUUC-Osa-085824	Oryza sativa	49.26	2.00e-50	191.00
IUUC-Olu-087905	Ostreococcus lucimarinus	35.42	4.00e-05	40.00
IUUC-Oga-088544	Otolemur garnettii	34.92	5.00e-18	85.50
IUUC-Oar-090181	Ovis aries	34.88	3.00e-19	89.00
IUUC-Ptr-090650	Pan troglodytes	35.78	9.00e-15	74.70
IUUC-Pan-092580	Papio anubis	34.27	3.00e-18	85.90
IUUC-Psi-093221	Pelodiscus sinensis	28.19	3.00e-17	82.80
IUUC-Ppa-095975	Physcomitrella patens	42.78	4.00e-32	130.00
IUUC-Pfo-096866	Poecilia formosa	32.68	5.00e-19	89.00
IUUC-Pab-098495	Pongo abelii	33.57	7.00e-18	84.70
IUUC-Pop-099718	Populus trichocarpa	55.51	8.00e-55	206.00
IUUC-Ppe-101204	Prunus persica	58.93	3.00e-60	224.00
IUUC-Pva-103121	Pteropus vampyrus	34.48	3.00e-18	85.90
IUUC-Pte-104201	Pyrenophora teres	26.52	2.00e-05	43.50
IUUC-Pyt-104667	Pyrenophora triticirepentis	26.52	2.00e-05	43.10
IUUC-Sce-106458	Saccharomyces cerevisiae	25.24	3.00e-04	38.90
IUUC-Sha-107534	Sarcophilus harrisii	33.59	2.00e-18	87.00
IUUC-Smo-109357	Selaginella moellendorffii	37.25	1.00e-36	145.00
IUUC-Sit-110104	Setaria italica	49.12	1.00e-55	208.00
IUUC-Sly-111163	Solanum lycopersicum	58.05	2.00e-48	184.00
IUUC-Stu-112361	Solanum tuberosum	58.90	3.00e-52	197.00
IUUC-Sbi-114807	Sorghum bicolor	49.79	1.00e-55	209.00
IUUC-Sre-114935	Sporisorium reilianum	27.78	8.00e-03	33.50
IUUC-Tgu-117269	Taeniopygia guttata	31.50	6.00e-16	78.20
IUUC-Tru-117641	Takifugu rubripes	34.38	5.00e-17	82.00
IUUC-Tni-120606	Tetraodon nigroviridis	30.62	1.00e-16	80.90
IUUC-Tca-121549	Theobroma cacao	53.87	5.00e-65	240.00
IUUC-Tre-122242	Trichoderma reesei	32.18	2.00e-05	43.50
IUUC-Tvi-122604	Trichoderma virens	35.85	2.50e-02	33.10
IUUC-Tae-125803	Triticum aestivum	48.79	7.00e-46	176.00
IUUC-Tur-126645	Triticum urartu	49.25	5.00e-45	174.00
IUUC-Tme-126884	Tuber melanosporum	40.00	6.00e-05	41.60
IUUC-Ttr-129059	Tursiops truncatus	30.07	8.00e-14	71.20
IUUC-Uma-129497	Ustilago maydis	26.88	1.00e-07	49.70
IUUC-Vvi-131634	Vitis vinifera	69.02	7.00e-72	262.00
IUUC-Xtr-132692	Xenopus tropicalis	29.84	1.00e-14	73.90
IUUC-Xma-133296	Xiphophorus maculatus	32.68	4.00e-19	89.00
IUUC-Yli-134611	Yarrowia lipolytica	26.74	1.00e-09	57.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence