iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001496

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01004818

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000002599.1	ENSAMET00000002833.1	ENSAMEP00000002716.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-06	27.0	21	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle ++  p++lpC H++++dCl ++        ++ rCP Cr
   Q: 21   CKICLEQLRA-PKTLPCLHTYCQDCLAQL-----ADGGHLRCPECR 60
           99******99.***************555.....499********8 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MVSQGSSPSL LEALSSDFLA CKICLEQLRA PKTLPCLHTY CQDCLAQLAD GGHLRCPECR 60
ETVPVPPAGV AAFKTNFFVN GLLDLVRARA GGDLRAGKPA CALCPLMGGA GTGGPATARC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTTCCC AGGGATCCTC GCCGTCCCTC CTGGAAGCCC TGAGCAGCGA TTTCCTGGCC 60
TGTAAAATAT GCCTGGAGCA GCTTCGTGCT CCCAAAACGT TGCCCTGCCT GCACACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004996	Anolis carolinensis	52.67	4.00e-76	279.00
IUUC-Bta-012368	Bos taurus	88.17	0.00e+00	1181.00
IUUC-Cja-019698	Callithrix jacchus	89.36	0.00e+00	1207.00
IUUC-Csa-023090	Chlorocebus sabaeus	90.01	0.00e+00	1137.00
IUUC-Dno-030051	Dasypus novemcinctus	80.49	0.00e+00	982.00
IUUC-Ete-032312	Echinops telfairi	88.48	1.00e-88	318.00
IUUC-Eca-033253	Equus caballus	95.96	1.00e-107	382.00
IUUC-Eeu-034772	Erinaceus europaeus	80.43	8.00e-53	200.00
IUUC-Fca-036198	Felis catus	80.87	0.00e+00	1029.00
IUUC-Ggo-045486	Gorilla gorilla	90.14	0.00e+00	1143.00
IUUC-Hsa-046238	Homo sapiens	90.01	0.00e+00	1139.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	84.89	0.00e+00	1066.00
IUUC-Loc-052915	Lepisosteus oculatus	30.52	4.00e-70	259.00
IUUC-Laf-053640	Loxodonta africana	84.91	0.00e+00	1056.00
IUUC-Mcc-055540	Macaca mulatta	89.88	0.00e+00	1151.00
IUUC-Mmr-060840	Microcebus murinus	88.96	0.00e+00	1163.00
IUUC-Mmu-064375	Mus musculus	78.71	0.00e+00	1028.00
IUUC-Mpu-066797	Mustela putorius furo	94.59	0.00e+00	1248.00
IUUC-Mlu-067996	Myotis lucifugus	90.38	0.00e+00	1179.00
IUUC-Nle-069238	Nomascus leucogenys	94.49	1.00e-113	402.00
IUUC-Oga-089156	Otolemur garnettii	84.91	0.00e+00	1148.00
IUUC-Oar-090056	Ovis aries	82.59	0.00e+00	1040.00
IUUC-Ptr-090837	Pan troglodytes	85.82	0.00e+00	696.00
IUUC-Psi-093493	Pelodiscus sinensis	45.32	1.00e-59	224.00
IUUC-Pab-097607	Pongo abelii	90.14	0.00e+00	1161.00
IUUC-Pva-102758	Pteropus vampyrus	87.39	0.00e+00	1130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence