iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095576

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545058

Gene Name

PHYPADRAFT_140736

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S169_73V6	PP1S169_73V6.2	PP1S169_73V6.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-40	133.7	191	226
UBD/Beta-Prp	3.30e-66	224.2	279	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++af ++   +++Gs D tik+WD  tg 
   Q: 191  GHLGWVRSIAFdPGnEWFCTGSADRTIKIWDSGTGQ 226
           8***********77799**************77765 PP

UBD/Beta-Prp

   S: 54   evtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
           +v+++ ++p+ +il+tg++D + +vwd++t  +v +l+ghe++v+s+  ++++  +v+Gshd ti++wdl  g+ ++ tl+ h+++v+ +++hp+
   Q: 279  GVYCLALHPTLDILMTGGRDSVCRVWDMRTKAQVFALSGHENTVCSVITQATDPQVVTGSHDTTIKLWDLAAGKTMS-TLTFHKKSVRALAMHPF 372
           799*************************************************************************9.***************** PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght..........dnvksvrfspn 233
           +  + s+s+D++ + ++l+ g+ l+ + +++   v+++s++++ + +vs++++g+  +wd+++g+    ++++t          + ++ + f++ 
   Q: 373  EHTFTSASADNI-KKFRLPKGEFLHNMLSQQRTIVNCMSINED-NVMVSAGDNGSMWFWDYKSGHN--FQQAQTivqpgsldseAGIYALSFDQT 463
           **********95.55************99999999****9997.79****************9974..44444455677888889********** PP
   S: 234  derlvsgssDgsiriW..d 250
           + rl+++ +D++i++W  d
   Q: 464  GSRLITCEADKTIKFWkeD 482
           ****************332 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MLTTGGGGTA VLEPVQPVQS VEPVEPQSLK KLSLKSLKRA LDIFAPVHGD RISAVPEGSK 60
IRVTCKVNDE YVVVKDMPVP STREGGGAKL GDNGLQSLRV PAPEQPGTNA GSASGKVGGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTGAGGGT TGGGAGTTTT CGCGCTTGGG TGGTAGCGTT CATGCGCGGG GACGTCTTCT 60
ATGATTAGGG TTTTCTCATC CTTTGGTTTG TTGCCGAGAG TGCAGCAAGT CTCGTTTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ppp:PHYPADRAFT_140736

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	65.12	0.00e+00	637.00
IUUC-Aml-001605	Ailuropoda melanoleuca	49.81	2.00e-134	471.00
IUUC-Atr-002757	Amborella trichopoda	70.26	0.00e+00	665.00
IUUC-Apl-003198	Anas platyrhynchos	50.69	1.00e-134	472.00
IUUC-Aca-004683	Anolis carolinensis	48.74	1.00e-132	465.00
IUUC-Aly-005775	Arabidopsis lyrata	65.71	0.00e+00	633.00
IUUC-Ath-007460	Arabidopsis thaliana	66.06	0.00e+00	634.00
IUUC-Ago-007884	Ashbya gossypii	52.12	3.00e-103	367.00
IUUC-Acl-008153	Aspergillus clavatus	60.64	4.00e-123	434.00
IUUC-Afl-008384	Aspergillus flavus	56.61	2.00e-124	438.00
IUUC-Afu-009045	Aspergillus fumigatus	56.08	4.00e-123	434.00
IUUC-Ani-009229	Aspergillus nidulans	60.64	7.00e-122	429.00
IUUC-Ang-009812	Aspergillus niger	63.41	2.00e-116	410.00
IUUC-Aor-010059	Aspergillus oryzae	56.61	2.00e-124	438.00
IUUC-Bgr-012042	Blumeria graminis	60.11	3.00e-128	451.00
IUUC-Bta-012406	Bos taurus	50.20	1.00e-132	466.00
IUUC-Bci-013760	Botrytis cinerea	56.50	4.00e-127	447.00
IUUC-Bdi-014776	Brachypodium distachyon	68.94	0.00e+00	655.00
IUUC-Bol-016189	Brassica oleracea	66.05	0.00e+00	640.00
IUUC-Bra-018044	Brassica rapa	66.05	0.00e+00	639.00
IUUC-Cel-018651	Caenorhabditis elegans	63.94	3.00e-128	451.00
IUUC-Cja-019974	Callithrix jacchus	49.61	7.00e-133	466.00
IUUC-Cfa-021085	Canis familiaris	49.90	2.00e-133	468.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	71.93	1.00e-154	538.00
IUUC-Csa-023883	Chlorocebus sabaeus	49.51	8.00e-133	466.00
IUUC-Cho-024623	Choloepus hoffmanni	50.10	8.00e-130	456.00
IUUC-Cin-025190	Ciona intestinalis	63.98	2.00e-131	461.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	64.02	3.00e-130	457.00
IUUC-Cne-027069	Cryptococcus neoformans	48.66	1.00e-120	426.00
IUUC-Dno-029112	Dasypus novemcinctus	49.51	1.00e-132	466.00
IUUC-Dor-031118	Dipodomys ordii	58.18	1.00e-132	465.00
IUUC-Dme-032138	Drosophila melanogaster	50.81	1.00e-134	472.00
IUUC-Ete-032411	Echinops telfairi	56.10	7.00e-109	386.00
IUUC-Eca-033521	Equus caballus	49.51	2.00e-132	464.00
IUUC-Fca-036358	Felis catus	49.90	2.00e-133	468.00
IUUC-Fal-036933	Ficedula albicollis	50.10	8.00e-134	469.00
IUUC-Fox-037713	Fusarium oxysporum	63.41	1.00e-129	455.00
IUUC-Fso-038380	Fusarium solani	63.22	5.00e-129	453.00
IUUC-Ggr-039915	Gaeumannomyces graminis	63.53	6.00e-123	433.00
IUUC-Gga-041176	Gallus gallus	50.98	1.00e-134	472.00
IUUC-Gma-042892	Glycine max	68.03	0.00e+00	655.00
IUUC-Ggo-044478	Gorilla gorilla	49.80	2.00e-132	464.00
IUUC-Hsa-046037	Homo sapiens	49.61	1.00e-132	465.00
IUUC-Hvu-047349	Hordeum vulgare	69.63	0.00e+00	653.00
IUUC-Kpa-049343	Komagataella pastoris	54.80	1.00e-110	392.00
IUUC-Lch-049830	Latimeria chalumnae	50.20	9.00e-137	479.00
IUUC-Loc-051794	Lepisosteus oculatus	49.80	2.00e-131	461.00
IUUC-Lma-053137	Leptosphaeria maculans	56.94	4.00e-122	431.00
IUUC-Mcc-055627	Macaca mulatta	49.51	8.00e-133	466.00
IUUC-Meu-056148	Macropus eugenii	49.58	2.00e-127	448.00
IUUC-Mor-056960	Magnaporthe oryzae	62.50	2.00e-127	448.00
IUUC-Mtr-057816	Medicago truncatula	67.08	0.00e+00	646.00
IUUC-Mla-059031	Melampsora laricipopulina	62.31	2.00e-118	417.00
IUUC-Mga-059337	Meleagris gallopavo	51.12	8.00e-134	469.00
IUUC-Mvi-060217	Microbotryum violaceum	61.68	8.00e-120	423.00
IUUC-Mdo-062863	Monodelphis domestica	48.09	7.00e-131	459.00
IUUC-Mmu-063988	Mus musculus	49.90	1.00e-133	469.00
IUUC-Mac-064459	Musa acuminata	67.48	2.00e-180	624.00
IUUC-Mpu-066559	Mustela putorius furo	50.49	2.00e-133	468.00
IUUC-Nfi-068492	Neosartorya fischeri	56.35	3.00e-123	434.00
IUUC-Ncr-068808	Neurospora crassa	62.01	1.00e-128	452.00
IUUC-Nle-069875	Nomascus leucogenys	49.61	8.00e-133	466.00
IUUC-Oba-075570	Oryza barthii	67.36	0.00e+00	645.00
IUUC-Obr-076366	Oryza brachyantha	81.86	5.00e-121	426.00
IUUC-Ogl-077153	Oryza glaberrima	67.36	0.00e+00	642.00
IUUC-Ogu-078540	Oryza glumaepatula	67.36	0.00e+00	645.00
IUUC-Oin-079612	Oryza indica	66.67	0.00e+00	638.00
IUUC-Olo-081077	Oryza longistaminata	66.67	0.00e+00	638.00
IUUC-Ome-081236	Oryza meridionalis	66.87	0.00e+00	639.00
IUUC-Oni-082499	Oryza nivara	67.36	0.00e+00	645.00
IUUC-Opu-083499	Oryza punctata	66.26	0.00e+00	635.00
IUUC-Oru-084276	Oryza rufipogon	67.36	0.00e+00	645.00
IUUC-Osa-085849	Oryza sativa	67.36	0.00e+00	645.00
IUUC-Olu-087637	Ostreococcus lucimarinus	71.18	9.00e-149	518.00
IUUC-Oga-087934	Otolemur garnettii	48.93	3.00e-132	464.00
IUUC-Ptr-091198	Pan troglodytes	49.61	8.00e-133	466.00
IUUC-Pan-092622	Papio anubis	49.51	8.00e-133	466.00
IUUC-Psi-093320	Pelodiscus sinensis	49.80	6.00e-133	466.00
IUUC-Pno-094826	Phaeosphaeria nodorum	49.57	3.00e-101	361.00
IUUC-Pfo-096894	Poecilia formosa	50.29	2.00e-134	471.00
IUUC-Pab-098020	Pongo abelii	49.51	5.00e-133	467.00
IUUC-Pop-099180	Populus trichocarpa	66.33	8.00e-180	622.00
IUUC-Ppe-101346	Prunus persica	66.53	0.00e+00	637.00
IUUC-Pva-102167	Pteropus vampyrus	53.33	8.00e-113	399.00
IUUC-Pgr-103516	Puccinia graminis	60.75	1.00e-116	412.00
IUUC-Ptt-103738	Puccinia triticina	51.28	3.00e-119	421.00
IUUC-Pte-104352	Pyrenophora teres	59.29	8.00e-126	443.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	58.41	8.00e-125	439.00
IUUC-Rno-105291	Rattus norvegicus	49.80	8.00e-134	469.00
IUUC-Sha-106943	Sarcophilus harrisii	47.43	1.00e-127	449.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	65.03	6.00e-125	440.00
IUUC-Spo-108049	Schizosaccharomyces pombe	64.33	1.00e-128	452.00
IUUC-Smo-109043	Selaginella moellendorffii	82.40	0.00e+00	627.00
IUUC-Sit-110431	Setaria italica	68.61	0.00e+00	651.00
IUUC-Sly-111391	Solanum lycopersicum	64.79	1.00e-169	588.00
IUUC-Stu-112364	Solanum tuberosum	68.09	2.00e-123	434.00
IUUC-Sar-113450	Sorex araneus	62.65	6.00e-131	460.00
IUUC-Sbi-113829	Sorghum bicolor	66.74	0.00e+00	644.00
IUUC-Sre-115153	Sporisorium reilianum	60.13	8.00e-116	409.00
IUUC-Ssc-116274	Sus scrofa	50.41	1.00e-133	469.00
IUUC-Tgu-117417	Taeniopygia guttata	50.50	8.00e-135	473.00
IUUC-Tru-117615	Takifugu rubripes	48.06	8.00e-127	446.00
IUUC-Tsy-119480	Tarsius syrichta	49.49	2.00e-132	465.00
IUUC-Tca-121287	Theobroma cacao	65.92	0.00e+00	653.00
IUUC-Tre-122010	Trichoderma reesei	64.02	1.00e-129	455.00
IUUC-Tvi-122475	Trichoderma virens	64.02	1.00e-129	456.00
IUUC-Tae-124397	Triticum aestivum	69.01	0.00e+00	658.00
IUUC-Tur-126116	Triticum urartu	59.91	1.00e-148	519.00
IUUC-Tme-126992	Tuber melanosporum	64.33	4.00e-131	460.00
IUUC-Tbe-127803	Tupaia belangeri	61.51	2.00e-100	358.00
IUUC-Uma-129447	Ustilago maydis	58.86	8.00e-116	409.00
IUUC-Vda-129780	Verticillium dahliae	62.72	7.00e-130	456.00
IUUC-Vpa-130557	Vicugna pacos	46.91	2.00e-47	182.00
IUUC-Vvi-130918	Vitis vinifera	68.99	0.00e+00	640.00
IUUC-Xma-133420	Xiphophorus maculatus	49.90	2.00e-137	481.00
IUUC-Zma-135804	Zea mays	66.74	0.00e+00	631.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence