iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000004384.3	ENSCJAT00000055574.1	ENSCJAP00000047811.1
ENSCJAG00000004384.3	ENSCJAT00000043015.2	ENSCJAP00000040700.2
ENSCJAG00000004384.3	ENSCJAT00000061036.1	ENSCJAP00000044852.1
ENSCJAG00000004384.3	ENSCJAT00000000377.2	ENSCJAP00000000346.2
ENSCJAG00000004384.3	ENSCJAT00000008486.2	ENSCJAP00000008026.2
ENSCJAG00000004384.3	ENSCJAT00000008491.2	ENSCJAP00000008030.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-29	102.1	522	559
UBD/Beta-Prp	1.30e-41	143.7	448	714

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllks 38
           gH++ vtc+++ + ++lvsG++D+++kvWD++tg++lk+
   Q: 522  GHQGTVTCMDL-CkNRLVSGARDCQVKVWDVDTGKCLKT 559
           8**********.4489********************986 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           ++  +++l+a +s +++i + d+ + k++     gh + v+a+ + +++++l++gs D  i+ wdl++g c+++++gh+ +v+++++++
   Q: 448  HY-SGGDLIAESS-NRKIHLLDIIQVKAIPIEfRGHAGSVRALFLCEEENFLLSGSYDLSIRYWDLRSGACTRIFNGHQGTVTCMDLCK 534
           44.4566666665.99*********99987655******************************************************** PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngk 193
             ++lvsG +d  ++vwd++tg+cl+ t+  h++ +  +++++   ++vs++  ++v++W +++g+l++tl+g h+++v++l fd+   
   Q: 535  --NRLVSGARDCQVKVWDVDTGKCLK-TF-RHKDPILATRIND--TYIVSACERGVVKVWHIAMGQLVKTLSG-HEGAVKCLFFDQ--W 614
           ..***********************9.55.5777888889988..***************************9.************..8 PP
   S: 194  elvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvl 280
           +l+sgs dg v  w++    ++c+++++  ++   +  ++    r++s+ +Dg iri++  +g+++k+++  n +  +v  + + +n +
   Q: 615  HLLSGSADGLVMAWSMAgkYERCLMAFKHPREVLHVFLLF---LRVISACADGKIRIYNFLNGNCMKVIKA-NGRGDPVLSFFIRGNRM 699
           ****************988899999999888877777666...89************************99.54555555555677777 PP
   S: 281  vlgsedskvniwklkk 296
           v  +e s+v +++++ 
   Q: 700  VVNTE-SNVLMFQFEH 714
           77766.6777777765 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MENLESRLKN APDFRCEKGN DFYSIYQKCE TCVLAWKIFS TKEWFCRIND VSQRRFLVSI 60
LKQLNSLYLL HYFQNILQTT QGKDFIYNRS LVDLSKKEGK VAKSSLNQMS DKTVEQKMKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGCAGAGT CCCAGGTGAG TTGGGGATTT TCCTCTCTTC TCAGAAATCT TATTTTAATT 60
CCTGAAGCAA ATTTCTTTCT CTTAGTGTGG ATCTTGTCTA TTTCATTAGG CATAGCAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001837	Ailuropoda melanoleuca	70.42	0.00e+00	663.00
IUUC-Apl-003572	Anas platyrhynchos	37.38	1.00e-155	543.00
IUUC-Aca-004297	Anolis carolinensis	42.48	6.00e-164	572.00
IUUC-Ame-011058	Astyanax mexicanus	36.65	9.00e-133	467.00
IUUC-Bta-012667	Bos taurus	69.28	0.00e+00	702.00
IUUC-Cfa-020784	Canis familiaris	72.77	0.00e+00	1569.00
IUUC-Cpo-021429	Cavia porcellus	69.60	0.00e+00	690.00
IUUC-Csa-023597	Chlorocebus sabaeus	85.53	0.00e+00	1248.00
IUUC-Cho-024559	Choloepus hoffmanni	65.95	0.00e+00	672.00
IUUC-Dre-027496	Danio rerio	44.33	2.00e-112	399.00
IUUC-Dno-028995	Dasypus novemcinctus	71.80	0.00e+00	1508.00
IUUC-Ete-032823	Echinops telfairi	78.92	1.00e-89	325.00
IUUC-Eca-033666	Equus caballus	70.61	0.00e+00	1274.00
IUUC-Eeu-035054	Erinaceus europaeus	68.03	4.00e-95	343.00
IUUC-Fca-035589	Felis catus	67.96	0.00e+00	1431.00
IUUC-Fal-037403	Ficedula albicollis	43.45	4.00e-115	409.00
IUUC-Gmo-038669	Gadus morhua	30.16	3.00e-69	256.00
IUUC-Gga-041227	Gallus gallus	38.30	2.00e-153	536.00
IUUC-Ggo-044603	Gorilla gorilla	54.66	2.00e-108	386.00
IUUC-Hsa-046221	Homo sapiens	85.38	0.00e+00	1863.00
IUUC-Itr-049011	Ictidomys tridecemlineatus	71.73	0.00e+00	1506.00
IUUC-Lch-050046	Latimeria chalumnae	37.08	0.00e+00	702.00
IUUC-Loc-052366	Lepisosteus oculatus	34.68	2.00e-169	590.00
IUUC-Laf-053745	Loxodonta africana	75.23	0.00e+00	1593.00
IUUC-Mcc-054826	Macaca mulatta	84.47	0.00e+00	1821.00
IUUC-Meu-056636	Macropus eugenii	46.79	2.00e-54	207.00
IUUC-Mga-060185	Meleagris gallopavo	37.47	3.00e-148	519.00
IUUC-Mdo-062382	Monodelphis domestica	46.81	0.00e+00	858.00
IUUC-Mmu-063623	Mus musculus	67.28	0.00e+00	1381.00
IUUC-Mpu-066872	Mustela putorius furo	66.12	0.00e+00	1233.00
IUUC-Mlu-067552	Myotis lucifugus	66.05	0.00e+00	630.00
IUUC-Nle-069247	Nomascus leucogenys	85.68	0.00e+00	1380.00
IUUC-Opr-070455	Ochotona princeps	69.73	0.00e+00	702.00
IUUC-Ont-071926	Oreochromis niloticus	39.29	9.00e-92	331.00
IUUC-Oan-073411	Ornithorhynchus anatinus	42.92	0.00e+00	791.00
IUUC-Ocu-073893	Oryctolagus cuniculus	71.56	0.00e+00	1276.00
IUUC-Oga-087937	Otolemur garnettii	72.27	0.00e+00	728.00
IUUC-Oar-089680	Ovis aries	67.28	0.00e+00	1435.00
IUUC-Ptr-091549	Pan troglodytes	80.67	0.00e+00	1728.00
IUUC-Pan-091904	Papio anubis	85.98	0.00e+00	1825.00
IUUC-Psi-093181	Pelodiscus sinensis	40.68	0.00e+00	783.00
IUUC-Pma-094711	Petromyzon marinus	40.42	1.00e-69	256.00
IUUC-Pab-098067	Pongo abelii	84.74	0.00e+00	1851.00
IUUC-Pca-100867	Procavia capensis	73.65	0.00e+00	845.00
IUUC-Pva-102209	Pteropus vampyrus	78.14	0.00e+00	1128.00
IUUC-Rno-105374	Rattus norvegicus	61.17	0.00e+00	1237.00
IUUC-Sha-107459	Sarcophilus harrisii	50.11	1.00e-112	399.00
IUUC-Tgu-117261	Taeniopygia guttata	41.00	1.00e-98	353.00
IUUC-Tru-117705	Takifugu rubripes	45.28	3.00e-41	160.00
IUUC-Tni-120365	Tetraodon nigroviridis	46.47	5.00e-40	157.00
IUUC-Tbe-128015	Tupaia belangeri	69.44	0.00e+00	1097.00
IUUC-Ttr-128654	Tursiops truncatus	72.51	0.00e+00	1043.00
IUUC-Vpa-130176	Vicugna pacos	67.10	0.00e+00	926.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence