iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116141

Ensembl Protein ID

ENSSSCP00000020187.1

UniProt Accession

I3L829; I3L829_PIG

Genbank Protein ID

ENSSSCP00000020187

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP340396

Gene Name

NPLOC4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000024235.1	ENSSSCT00000029529.1	ENSSSCP00000020187.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	1.10e-12	47.5	513	539

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 3    aqWaCsaCTflNePeavkCemCsrpRg 29
           a+WaC++CTf+N+P +++CemCs pR+
   Q: 513  AMWACQHCTFMNQPGTGHCEMCSLPRT 539
           79***********************95 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

RHGDLLFLFP SSLAGPSAEM ETSAPLALKA CGAPNVVEDD IDQFLSRQDG KIYRSRDPQL 60
CRHGPLGKCV HCVPLEPFDE DYLNHLEPPV KHMSFHAYIR KLTGGADKGK FVALENISCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCACGGGG ACCTGCTGTT TCTGTTCCCC TCGAGCCTCG CTGGCCCCTC TGCGGAGATG 60
GAGACGTCGG CCCCGCTGGC GTTGAAGGCC TGCGGGGCTC CCAACGTGGT GGAAGACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR016563--Npl4
IPR007717--NPL4_C
IPR007716--NPL4_Zn-bd_put
IPR001876--Znf_RanBP2

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF05021--NPL4
PF05020--zf-NPL4

SMART

SM00547--ZnF_RBZ

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0043130--F:ubiquitin binding
GO:0031625--F:ubiquitin protein ligase binding
GO:0008270--F:zinc ion binding
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000460	Aegilops tauschii	27.31	8.00e-15	74.70
IUUC-Aml-002268	Ailuropoda melanoleuca	96.66	0.00e+00	1096.00
IUUC-Atr-002939	Amborella trichopoda	27.56	2.00e-18	86.30
IUUC-Apl-003496	Anas platyrhynchos	88.19	0.00e+00	1003.00
IUUC-Aca-005230	Anolis carolinensis	88.70	0.00e+00	1023.00
IUUC-Aly-006056	Arabidopsis lyrata	30.18	1.00e-22	100.00
IUUC-Ath-006993	Arabidopsis thaliana	28.19	3.00e-21	95.90
IUUC-Ago-007954	Ashbya gossypii	38.78	1.00e-76	280.00
IUUC-Acl-008208	Aspergillus clavatus	37.37	6.00e-89	321.00
IUUC-Afl-008574	Aspergillus flavus	41.33	3.00e-86	312.00
IUUC-Afu-008825	Aspergillus fumigatus	36.82	2.00e-94	339.00
IUUC-Ani-009495	Aspergillus nidulans	39.28	3.00e-92	332.00
IUUC-Ang-009762	Aspergillus niger	37.71	8.00e-87	314.00
IUUC-Aor-010199	Aspergillus oryzae	41.09	1.00e-85	310.00
IUUC-Ate-010592	Aspergillus terreus	40.86	3.00e-90	325.00
IUUC-Ame-011587	Astyanax mexicanus	52.07	2.00e-149	521.00
IUUC-Bgr-012124	Blumeria graminis	36.73	2.00e-86	312.00
IUUC-Bta-013312	Bos taurus	97.03	0.00e+00	1113.00
IUUC-Bci-013648	Botrytis cinerea	37.82	6.00e-92	331.00
IUUC-Bdi-014326	Brachypodium distachyon	27.64	2.00e-15	76.60
IUUC-Bol-016294	Brassica oleracea	28.78	6.00e-21	94.70
IUUC-Bra-017023	Brassica rapa	28.78	4.00e-21	95.50
IUUC-Cel-018713	Caenorhabditis elegans	44.21	3.00e-131	461.00
IUUC-Cja-018869	Callithrix jacchus	95.55	0.00e+00	1074.00
IUUC-Cfa-020757	Canis familiaris	96.85	0.00e+00	1108.00
IUUC-Cpo-022390	Cavia porcellus	96.28	0.00e+00	1088.00
IUUC-Csa-023366	Chlorocebus sabaeus	95.73	0.00e+00	1100.00
IUUC-Cho-024455	Choloepus hoffmanni	87.59	0.00e+00	763.00
IUUC-Cin-025638	Ciona intestinalis	51.24	8.00e-132	463.00
IUUC-Csv-026310	Ciona savignyi	49.10	3.00e-126	445.00
IUUC-Cgl-026685	Colletotrichum gloeosporioides	37.58	5.00e-86	311.00
IUUC-Cne-026794	Cryptococcus neoformans	31.15	2.00e-68	253.00
IUUC-Cme-027248	Cyanidioschyzon merolae	25.63	3.00e-15	76.30
IUUC-Dre-027689	Danio rerio	80.82	0.00e+00	939.00
IUUC-Dno-030004	Dasypus novemcinctus	95.18	0.00e+00	1078.00
IUUC-Dor-030585	Dipodomys ordii	94.87	0.00e+00	965.00
IUUC-Dse-031202	Dothistroma septosporum	36.58	2.00e-87	316.00
IUUC-Dme-032092	Drosophila melanogaster	50.80	4.00e-169	587.00
IUUC-Ete-033009	Echinops telfairi	95.95	3.00e-98	351.00
IUUC-Eca-034001	Equus caballus	95.73	0.00e+00	1100.00
IUUC-Eeu-034485	Erinaceus europaeus	79.26	0.00e+00	777.00
IUUC-Fca-036128	Felis catus	96.28	0.00e+00	1073.00
IUUC-Fal-037523	Ficedula albicollis	90.00	0.00e+00	1039.00
IUUC-Fox-037802	Fusarium oxysporum	36.19	4.00e-92	332.00
IUUC-Fso-038152	Fusarium solani	37.45	1.00e-91	330.00
IUUC-Gmo-038486	Gadus morhua	75.79	0.00e+00	867.00
IUUC-Ggr-039916	Gaeumannomyces graminis	37.45	2.00e-85	310.00
IUUC-Gga-041208	Gallus gallus	91.67	0.00e+00	1055.00
IUUC-Gac-042304	Gasterosteus aculeatus	77.80	0.00e+00	878.00
IUUC-Gma-044178	Glycine max	26.62	2.00e-15	76.60
IUUC-Ggo-045236	Gorilla gorilla	92.02	0.00e+00	1045.00
IUUC-Hsa-046334	Homo sapiens	95.36	0.00e+00	1095.00
IUUC-Hvu-047323	Hordeum vulgare	25.79	3.00e-08	51.20
IUUC-Itr-047878	Ictidomys tridecemlineatus	95.71	3.00e-179	620.00
IUUC-Lch-050302	Latimeria chalumnae	82.84	0.00e+00	944.00
IUUC-Lpe-051362	Leersia perrieri	28.21	1.00e-17	84.00
IUUC-Loc-052548	Lepisosteus oculatus	82.66	0.00e+00	936.00
IUUC-Lma-053092	Leptosphaeria maculans	37.87	3.00e-94	339.00
IUUC-Laf-053911	Loxodonta africana	95.19	0.00e+00	1091.00
IUUC-Mcc-055830	Macaca mulatta	95.15	0.00e+00	1081.00
IUUC-Meu-056460	Macropus eugenii	57.29	8.00e-146	509.00
IUUC-Mor-057189	Magnaporthe oryzae	36.63	2.00e-88	319.00
IUUC-Mpo-057366	Magnaporthe poae	38.19	8.00e-86	310.00
IUUC-Mtr-057834	Medicago truncatula	27.06	1.00e-17	84.00
IUUC-Mla-059190	Melampsora laricipopulina	33.75	3.00e-79	289.00
IUUC-Mga-060036	Meleagris gallopavo	91.48	0.00e+00	1052.00
IUUC-Mvi-060275	Microbotryum violaceum	40.36	3.00e-77	282.00
IUUC-Mmr-061300	Microcebus murinus	95.36	0.00e+00	1091.00
IUUC-Mdo-062911	Monodelphis domestica	94.70	0.00e+00	918.00
IUUC-Mmu-063916	Mus musculus	95.72	0.00e+00	1094.00
IUUC-Mac-065601	Musa acuminata	26.75	1.00e-11	63.50
IUUC-Mpu-065912	Mustela putorius furo	96.10	0.00e+00	1100.00
IUUC-Mlu-067965	Myotis lucifugus	94.62	0.00e+00	1060.00
IUUC-Nfi-068465	Neosartorya fischeri	39.19	9.00e-95	340.00
IUUC-Ncr-068936	Neurospora crassa	37.74	3.00e-88	318.00
IUUC-Nle-069570	Nomascus leucogenys	94.99	0.00e+00	1090.00
IUUC-Opr-071097	Ochotona princeps	91.17	0.00e+00	912.00
IUUC-Ont-071430	Oreochromis niloticus	79.35	0.00e+00	921.00
IUUC-Oan-073709	Ornithorhynchus anatinus	79.57	0.00e+00	664.00
IUUC-Ocu-074875	Oryctolagus cuniculus	90.37	0.00e+00	1012.00
IUUC-Oba-075214	Oryza barthii	26.98	1.00e-17	84.00
IUUC-Obr-076758	Oryza brachyantha	28.04	3.00e-17	82.00
IUUC-Ogl-077665	Oryza glaberrima	26.98	1.00e-17	84.00
IUUC-Ogu-078899	Oryza glumaepatula	26.98	1.00e-17	84.00
IUUC-Oin-079167	Oryza indica	26.98	1.00e-17	84.00
IUUC-Olo-080451	Oryza longistaminata	27.47	9.00e-18	83.60
IUUC-Ome-081836	Oryza meridionalis	26.98	1.00e-17	84.00
IUUC-Oni-083019	Oryza nivara	26.98	1.00e-17	84.00
IUUC-Opu-083122	Oryza punctata	27.54	6.00e-18	85.10
IUUC-Oru-084900	Oryza rufipogon	26.98	1.00e-17	84.00
IUUC-Osa-086054	Oryza sativa	26.98	1.00e-17	84.00
IUUC-Ola-087077	Oryzias latipes	67.44	0.00e+00	748.00
IUUC-Olu-087601	Ostreococcus lucimarinus	26.11	2.00e-05	43.50
IUUC-Oga-088049	Otolemur garnettii	85.40	0.00e+00	908.00
IUUC-Oar-089678	Ovis aries	97.03	0.00e+00	1114.00
IUUC-Ptr-091380	Pan troglodytes	93.15	0.00e+00	996.00
IUUC-Pan-092821	Papio anubis	94.43	0.00e+00	1085.00
IUUC-Psi-093074	Pelodiscus sinensis	91.68	0.00e+00	1046.00
IUUC-Pma-094102	Petromyzon marinus	69.41	0.00e+00	814.00
IUUC-Pno-094987	Phaeosphaeria nodorum	37.68	2.00e-92	333.00
IUUC-Ppa-095368	Physcomitrella patens	27.03	2.00e-17	83.20
IUUC-Pfo-097245	Poecilia formosa	80.26	0.00e+00	885.00
IUUC-Pab-098763	Pongo abelii	95.92	0.00e+00	1100.00
IUUC-Pop-099355	Populus trichocarpa	30.26	2.00e-14	72.40
IUUC-Ppe-101990	Prunus persica	27.85	5.00e-18	85.10
IUUC-Pva-102308	Pteropus vampyrus	86.68	0.00e+00	880.00
IUUC-Pgr-103626	Puccinia graminis	33.65	5.00e-77	281.00
IUUC-Pte-104100	Pyrenophora teres	36.82	2.00e-89	322.00
IUUC-Pyt-104482	Pyrenophora triticirepentis	37.24	6.00e-91	328.00
IUUC-Rno-105582	Rattus norvegicus	95.34	0.00e+00	1089.00
IUUC-Sce-106145	Saccharomyces cerevisiae	36.43	3.00e-87	315.00
IUUC-Sha-106647	Sarcophilus harrisii	94.30	0.00e+00	1061.00
IUUC-Sja-107972	Schizosaccharomyces japonicus	39.15	4.00e-82	298.00
IUUC-Spo-108281	Schizosaccharomyces pombe	36.04	2.00e-87	316.00
IUUC-Ssl-108617	Sclerotinia sclerotiorum	40.32	3.00e-92	332.00
IUUC-Smo-108933	Selaginella moellendorffii	29.48	2.00e-17	83.20
IUUC-Sit-110083	Setaria italica	26.79	5.00e-16	78.60
IUUC-Sly-111645	Solanum lycopersicum	25.00	6.00e-16	78.20
IUUC-Stu-112422	Solanum tuberosum	25.82	3.00e-16	79.00
IUUC-Sbi-113987	Sorghum bicolor	28.21	1.00e-16	80.50
IUUC-Sre-115095	Sporisorium reilianum	37.55	9.00e-80	291.00
IUUC-Tgu-117492	Taeniopygia guttata	89.61	0.00e+00	740.00
IUUC-Tru-118463	Takifugu rubripes	77.38	0.00e+00	870.00
IUUC-Tsy-118993	Tarsius syrichta	85.25	0.00e+00	867.00
IUUC-Tni-119896	Tetraodon nigroviridis	79.26	0.00e+00	874.00
IUUC-Tca-121169	Theobroma cacao	28.43	3.00e-20	92.80
IUUC-Tre-122046	Trichoderma reesei	35.39	9.00e-89	320.00
IUUC-Tvi-122415	Trichoderma virens	37.84	3.00e-89	322.00
IUUC-Tae-123514	Triticum aestivum	27.31	5.00e-15	75.50
IUUC-Tme-127123	Tuber melanosporum	38.04	2.00e-96	346.00
IUUC-Tbe-127629	Tupaia belangeri	89.03	2.00e-126	446.00
IUUC-Ttr-128476	Tursiops truncatus	81.52	0.00e+00	848.00
IUUC-Uma-129492	Ustilago maydis	38.28	2.00e-80	293.00
IUUC-Vda-129702	Verticillium dahliae	36.34	4.00e-88	318.00
IUUC-Vvi-131090	Vitis vinifera	27.13	8.00e-14	71.20
IUUC-Xtr-131786	Xenopus tropicalis	86.00	0.00e+00	956.00
IUUC-Xma-133997	Xiphophorus maculatus	77.26	0.00e+00	881.00
IUUC-Yli-134537	Yarrowia lipolytica	38.46	1.00e-86	313.00
IUUC-Zma-134847	Zea mays	29.02	8.00e-18	84.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence