iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016483

Ensembl Protein ID

Bo2g013280.1

UniProt Accession

A0A0D3AJE5; A0A0D3AJE5_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo2g013280	Bo2g013280.1	Bo2g013280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-59	195.0	142	175
UBD/Beta-Prp	9.50e-112	374.5	414	668

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd...tllvsGsdDgtikvWDl 30
           gH++ v ++ f +d   ++l+sGsdD t++vWDl
   Q: 142  GHKGVVLSVLFhPDankNILISGSDDATVRVWDL 175
           8********9**5554688**************8 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls..........tgkcvhtlkghedsvlslsfspsg 106
           ++ l++tgs+d+t+++w++t+++++    gh++ + av f +++  ++v+gs Drt+kvw+l+          + k+ +++ +h++++ s+++ +++
   Q: 414  GNVLVVTGSKDKTVRLWNATSQSCIGVGTGHNGDILAVAFAKKSFsFFVSGSGDRTLKVWSLDgisedseepiNLKTRSVVAAHDKDINSVAVARND 510
           556899**********************************887645**************8888888888999************************ PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt 203
           + + +Gs+drt+ +w l+    +  tl+gh++ + +v+++p +++++++s D+tv++W ++ g++l+t++g ht+sv   sf  +g+++vs++ dg 
   Q: 511  SLVCTGSEDRTASIWRLPDLVHVV-TLKGHKRRIFSVEFSPVDQCVMTASGDKTVKIWAISDGSCLKTFEG-HTSSVLRASFITDGTQFVSCGADGL 605
           ************************.*********************************************9.************************* PP
   S: 204  vklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllktlqlhns 265
           +klw++ t+ec+ t+  h+d v+ +++ +++e +++g+ D +i+iW d++ +d    + ++++
   Q: 606  LKLWNVNTSECIATYDQHEDKVWALAVGKKTEMVATGGGDAVINIWhDSTASDKEDEFRKEEE 668
           **********************************************99999988888877765 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAPQSLKKNY RCSRSLKQFY SGGPFIVSSD GSFIVCACGD AINIVEASDS SVKSTIEGES 60
DSLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG HEGPVMGMAC HASGGLLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCTC AGTCGCTGAA GAAGAACTAT CGTTGCTCTC GATCTCTAAA GCAGTTCTAC 60
AGCGGAGGCC CTTTCATCGT TTCCTCTGAC GGCTCTTTCA TCGTCTGCGC ATGTGGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	57.23	0.00e+00	970.00
IUUC-Atr-002486	Amborella trichopoda	62.50	0.00e+00	1101.00
IUUC-Apl-003519	Anas platyrhynchos	32.74	2.00e-111	396.00
IUUC-Aca-004363	Anolis carolinensis	34.65	1.00e-73	270.00
IUUC-Ame-010930	Astyanax mexicanus	39.60	2.00e-39	154.00
IUUC-Bta-012611	Bos taurus	36.16	2.00e-142	499.00
IUUC-Bdi-014384	Brachypodium distachyon	61.68	0.00e+00	1085.00
IUUC-Bra-017328	Brassica rapa	96.34	0.00e+00	1563.00
IUUC-Cja-019092	Callithrix jacchus	35.63	6.00e-148	517.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	62.77	7.00e-52	195.00
IUUC-Csa-024205	Chlorocebus sabaeus	35.75	9.00e-148	517.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	28.99	1.00e-104	374.00
IUUC-Dre-028138	Danio rerio	36.14	7.00e-148	517.00
IUUC-Dno-029914	Dasypus novemcinctus	34.20	1.00e-100	360.00
IUUC-Eca-034354	Equus caballus	36.33	5.00e-142	498.00
IUUC-Fal-036859	Ficedula albicollis	37.78	6.00e-156	544.00
IUUC-Gmo-038711	Gadus morhua	34.84	3.00e-136	479.00
IUUC-Gga-040263	Gallus gallus	36.96	2.00e-153	536.00
IUUC-Gac-041291	Gasterosteus aculeatus	36.91	9.00e-156	544.00
IUUC-Ggo-044693	Gorilla gorilla	35.74	2.00e-146	513.00
IUUC-Hsa-046048	Homo sapiens	35.50	4.00e-146	511.00
IUUC-Hvu-047608	Hordeum vulgare	61.29	0.00e+00	1068.00
IUUC-Lpe-050945	Leersia perrieri	61.42	0.00e+00	1032.00
IUUC-Loc-052679	Lepisosteus oculatus	37.55	1.00e-166	580.00
IUUC-Laf-053685	Loxodonta africana	35.63	2.00e-135	476.00
IUUC-Mcc-055861	Macaca mulatta	35.75	5.00e-146	511.00
IUUC-Mpo-057456	Magnaporthe poae	27.97	9.00e-71	261.00
IUUC-Mga-060080	Meleagris gallopavo	36.11	8.00e-153	534.00
IUUC-Mac-065189	Musa acuminata	61.55	0.00e+00	1105.00
IUUC-Mlu-067716	Myotis lucifugus	35.58	5.00e-157	548.00
IUUC-Nle-069832	Nomascus leucogenys	35.50	7.00e-148	517.00
IUUC-Opr-071183	Ochotona princeps	35.49	1.00e-141	496.00
IUUC-Ont-072371	Oreochromis niloticus	37.13	2.00e-159	556.00
IUUC-Oan-073491	Ornithorhynchus anatinus	34.23	6.00e-124	437.00
IUUC-Oba-075963	Oryza barthii	61.80	0.00e+00	1060.00
IUUC-Obr-076173	Oryza brachyantha	61.96	0.00e+00	1040.00
IUUC-Ogl-077692	Oryza glaberrima	61.60	0.00e+00	1057.00
IUUC-Ogu-078965	Oryza glumaepatula	61.80	0.00e+00	1060.00
IUUC-Oin-079708	Oryza indica	61.44	0.00e+00	1056.00
IUUC-Olo-080679	Oryza longistaminata	61.32	0.00e+00	1056.00
IUUC-Oni-082960	Oryza nivara	61.32	0.00e+00	1055.00
IUUC-Opu-083282	Oryza punctata	61.70	0.00e+00	1027.00
IUUC-Oru-085224	Oryza rufipogon	61.68	0.00e+00	1058.00
IUUC-Osa-085320	Oryza sativa	61.68	0.00e+00	1058.00
IUUC-Ola-086370	Oryzias latipes	31.10	5.00e-73	268.00
IUUC-Oga-088458	Otolemur garnettii	35.40	7.00e-154	537.00
IUUC-Oar-090032	Ovis aries	34.83	2.00e-104	372.00
IUUC-Pan-091691	Papio anubis	34.46	7.00e-137	481.00
IUUC-Pfo-096132	Poecilia formosa	37.83	5.00e-153	535.00
IUUC-Pab-097855	Pongo abelii	36.00	2.00e-149	522.00
IUUC-Pop-099434	Populus trichocarpa	67.28	0.00e+00	1168.00
IUUC-Pca-100232	Procavia capensis	33.24	1.00e-50	194.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.58	4.00e-93	335.00
IUUC-Spo-108361	Schizosaccharomyces pombe	30.86	1.00e-110	394.00
IUUC-Sit-110258	Setaria italica	60.26	0.00e+00	1083.00
IUUC-Sly-111521	Solanum lycopersicum	68.02	0.00e+00	1147.00
IUUC-Sar-113586	Sorex araneus	35.95	2.00e-19	90.50
IUUC-Sbi-114768	Sorghum bicolor	59.56	0.00e+00	1072.00
IUUC-Ssc-116342	Sus scrofa	28.29	1.00e-64	241.00
IUUC-Tru-118024	Takifugu rubripes	36.25	4.00e-151	528.00
IUUC-Tni-119971	Tetraodon nigroviridis	34.95	3.00e-152	531.00
IUUC-Tca-121248	Theobroma cacao	71.61	0.00e+00	1209.00
IUUC-Tae-123690	Triticum aestivum	62.82	0.00e+00	1081.00
IUUC-Vvi-131511	Vitis vinifera	71.33	0.00e+00	1206.00
IUUC-Xma-133672	Xiphophorus maculatus	37.88	2.00e-160	559.00
IUUC-Zma-135559	Zea mays	58.04	0.00e+00	1043.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence