iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012611

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin beta-like protein 3

Genbank Nucleotide ID

DAAA02057306

Gene Name

TBL3; BOS_22521

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000020366.4	ENSBTAT00000027147.3	ENSBTAP00000027147.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-56	184.9	519	558
UBD/Beta-Prp	4.30e-101	338.1	413	642

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W l ++ +lk+
   Q: 519  GHRRGLWCVQFsPMdQVLATASADGTIKLWALQDFSCLKT 558
           8999*******977789*******************9986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...........tgkcvhtlk....ghedsvlslsfspsgdklvsGshdr 116
           ++++ sgh+  v ++++s+ ++ +lvtgs+D t+k+w+l             g+ +   +     h++++ s+++ p+++ l++Gs+dr
   Q: 413  CVAQGSGHTHSVGTICCSRLKEtFLVTGSQDCTVKLWPLPeallskgtgheGGPVFLQAQatqrCHDKDINSVAVAPNDKLLATGSQDR 501
           5677899**********998878**************8877888999999966666655555558************************ PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           t+++w l+  q l  t+sgh++  +cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s + dg +k
   Q: 502  TAKLWALPRCQLLG-TFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLLK 588
           *************9.*********************************************9.*************************** PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllk 258
           lw ++++ecvrtl +h+d v+ ++ s+ d+r ++g+sD  + +W d++  +   
   Q: 589  LWTIKNNECVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWkDVTEAEQAE 642
           ********************************************8777665554 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAEVAAGVGR FKSNYAVERK IEPFYKGGKV QLDQTGQHLF CVCGTRVNIL DVASGAVLRS 60
LEQEDQEDIT AFDLSPDDKV LVTASRALLL AQWAWQEGSV TRLWKAIHTA PVATMAFDPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGGTGAC GCCATCTCTG CGAGCCCAAG GTGCGGAATG GCTCCCGGGT CTCCCTCACG 60
CGGTGGCACC GGCGACATGG CTGAGGTGGC GGCCGGAGTG GGCCGCTTCA AGTCCAAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	36.00	3.00e-146	512.00
IUUC-Aml-002376	Ailuropoda melanoleuca	89.83	0.00e+00	1395.00
IUUC-Atr-002486	Amborella trichopoda	39.09	1.00e-162	566.00
IUUC-Apl-003519	Anas platyrhynchos	61.01	0.00e+00	892.00
IUUC-Aca-004363	Anolis carolinensis	55.30	5.00e-148	517.00
IUUC-Aly-006152	Arabidopsis lyrata	36.07	3.00e-151	529.00
IUUC-Ath-006966	Arabidopsis thaliana	35.83	1.00e-148	520.00
IUUC-Ago-007746	Ashbya gossypii	29.15	2.00e-102	366.00
IUUC-Acl-008009	Aspergillus clavatus	29.00	7.00e-105	375.00
IUUC-Afl-008681	Aspergillus flavus	28.81	1.00e-94	341.00
IUUC-Afu-008798	Aspergillus fumigatus	29.01	1.00e-93	337.00
IUUC-Ani-009278	Aspergillus nidulans	27.39	6.00e-98	352.00
IUUC-Ang-009640	Aspergillus niger	29.56	3.00e-100	359.00
IUUC-Aor-010160	Aspergillus oryzae	28.81	1.00e-94	341.00
IUUC-Ate-010320	Aspergillus terreus	28.65	1.00e-103	371.00
IUUC-Ame-010930	Astyanax mexicanus	61.19	2.00e-74	271.00
IUUC-Bgr-012054	Blumeria graminis	28.35	2.00e-101	363.00
IUUC-Bci-013797	Botrytis cinerea	30.46	2.00e-112	400.00
IUUC-Bdi-014384	Brachypodium distachyon	38.56	6.00e-164	571.00
IUUC-Bol-016483	Brassica oleracea	35.83	1.00e-151	530.00
IUUC-Bra-017798	Brassica rapa	36.20	5.00e-151	528.00
IUUC-Cel-018664	Caenorhabditis elegans	32.04	1.00e-121	430.00
IUUC-Cja-019092	Callithrix jacchus	89.59	0.00e+00	1439.00
IUUC-Cfa-021040	Canis familiaris	88.83	0.00e+00	1399.00
IUUC-Cpo-022529	Cavia porcellus	88.21	0.00e+00	1391.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	58.78	2.00e-45	174.00
IUUC-Csa-024205	Chlorocebus sabaeus	89.34	0.00e+00	1441.00
IUUC-Cin-025560	Ciona intestinalis	45.64	0.00e+00	726.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.64	9.00e-115	407.00
IUUC-Cne-027082	Cryptococcus neoformans	30.33	4.00e-114	405.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.17	8.00e-30	126.00
IUUC-Dre-028138	Danio rerio	53.14	0.00e+00	874.00
IUUC-Dno-029914	Dasypus novemcinctus	66.44	0.00e+00	825.00
IUUC-Dor-030685	Dipodomys ordii	75.51	0.00e+00	899.00
IUUC-Dse-031429	Dothistroma septosporum	29.69	2.00e-98	353.00
IUUC-Dme-031995	Drosophila melanogaster	32.14	6.00e-120	425.00
IUUC-Ete-033086	Echinops telfairi	88.81	0.00e+00	779.00
IUUC-Eca-034354	Equus caballus	92.31	0.00e+00	1406.00
IUUC-Eeu-034832	Erinaceus europaeus	86.24	0.00e+00	798.00
IUUC-Fca-036136	Felis catus	85.38	0.00e+00	1344.00
IUUC-Fal-036859	Ficedula albicollis	65.40	0.00e+00	1044.00
IUUC-Fox-037863	Fusarium oxysporum	30.89	6.00e-103	368.00
IUUC-Fso-038389	Fusarium solani	30.90	2.00e-113	403.00
IUUC-Gmo-038711	Gadus morhua	57.50	0.00e+00	903.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.83	6.00e-105	375.00
IUUC-Gga-040263	Gallus gallus	65.79	0.00e+00	1083.00
IUUC-Gac-041291	Gasterosteus aculeatus	61.34	0.00e+00	1036.00
IUUC-Gma-044328	Glycine max	39.17	1.00e-165	576.00
IUUC-Ggo-044693	Gorilla gorilla	89.71	0.00e+00	1420.00
IUUC-Hsa-046048	Homo sapiens	89.71	0.00e+00	1419.00
IUUC-Hvu-047608	Hordeum vulgare	38.04	1.00e-162	567.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	89.24	0.00e+00	1444.00
IUUC-Kpa-049209	Komagataella pastoris	32.66	2.00e-120	427.00
IUUC-Lch-050085	Latimeria chalumnae	62.17	0.00e+00	990.00
IUUC-Lpe-050945	Leersia perrieri	38.07	7.00e-158	551.00
IUUC-Loc-052679	Lepisosteus oculatus	64.67	0.00e+00	1080.00
IUUC-Laf-053685	Loxodonta africana	86.19	0.00e+00	1316.00
IUUC-Mcc-055861	Macaca mulatta	89.84	0.00e+00	1422.00
IUUC-Meu-056820	Macropus eugenii	69.88	0.00e+00	959.00
IUUC-Mor-057234	Magnaporthe oryzae	28.01	2.00e-103	370.00
IUUC-Mpo-057456	Magnaporthe poae	29.96	1.00e-85	310.00
IUUC-Mtr-058122	Medicago truncatula	39.29	4.00e-167	582.00
IUUC-Mla-058980	Melampsora laricipopulina	28.11	2.00e-93	337.00
IUUC-Mga-060080	Meleagris gallopavo	64.42	0.00e+00	1068.00
IUUC-Mvi-060338	Microbotryum violaceum	35.91	5.00e-145	508.00
IUUC-Mmr-060762	Microcebus murinus	90.21	0.00e+00	1394.00
IUUC-Mdo-061975	Monodelphis domestica	74.53	0.00e+00	1165.00
IUUC-Mmu-064038	Mus musculus	88.23	0.00e+00	1383.00
IUUC-Mac-065189	Musa acuminata	36.98	4.00e-157	548.00
IUUC-Mpu-066526	Mustela putorius furo	89.73	0.00e+00	1390.00
IUUC-Mlu-067716	Myotis lucifugus	89.62	0.00e+00	1484.00
IUUC-Nfi-068474	Neosartorya fischeri	29.29	4.00e-96	346.00
IUUC-Ncr-068826	Neurospora crassa	27.84	4.00e-94	339.00
IUUC-Nle-069832	Nomascus leucogenys	89.71	0.00e+00	1445.00
IUUC-Opr-071183	Ochotona princeps	81.56	0.00e+00	1293.00
IUUC-Ont-072371	Oreochromis niloticus	62.27	0.00e+00	1027.00
IUUC-Oan-073491	Ornithorhynchus anatinus	66.71	0.00e+00	945.00
IUUC-Oba-075963	Oryza barthii	37.55	3.00e-160	558.00
IUUC-Obr-076173	Oryza brachyantha	38.71	6.00e-160	558.00
IUUC-Ogl-077692	Oryza glaberrima	37.55	3.00e-160	559.00
IUUC-Ogu-078965	Oryza glumaepatula	37.55	3.00e-160	559.00
IUUC-Oin-079708	Oryza indica	37.55	1.00e-160	560.00
IUUC-Olo-080679	Oryza longistaminata	37.47	2.00e-157	549.00
IUUC-Oni-082960	Oryza nivara	37.42	3.00e-160	559.00
IUUC-Opu-083282	Oryza punctata	37.36	3.00e-154	539.00
IUUC-Oru-085224	Oryza rufipogon	37.55	2.00e-160	559.00
IUUC-Osa-085320	Oryza sativa	37.55	2.00e-160	559.00
IUUC-Ola-086370	Oryzias latipes	46.74	6.00e-130	457.00
IUUC-Olu-087814	Ostreococcus lucimarinus	33.60	5.00e-104	372.00
IUUC-Oga-088458	Otolemur garnettii	87.45	0.00e+00	1465.00
IUUC-Oar-090032	Ovis aries	87.28	0.00e+00	1042.00
IUUC-Ptr-090749	Pan troglodytes	89.46	0.00e+00	1408.00
IUUC-Pan-091691	Papio anubis	86.89	0.00e+00	1353.00
IUUC-Psi-093200	Pelodiscus sinensis	64.69	0.00e+00	1065.00
IUUC-Pma-094165	Petromyzon marinus	52.70	0.00e+00	644.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.02	5.00e-88	318.00
IUUC-Ppa-095336	Physcomitrella patens	40.67	3.00e-162	565.00
IUUC-Pfo-096132	Poecilia formosa	61.78	0.00e+00	986.00
IUUC-Pab-097855	Pongo abelii	89.59	0.00e+00	1441.00
IUUC-Pop-099434	Populus trichocarpa	36.25	4.00e-152	531.00
IUUC-Pca-100232	Procavia capensis	87.84	3.00e-170	592.00
IUUC-Ppe-101665	Prunus persica	37.41	3.00e-159	555.00
IUUC-Pva-102178	Pteropus vampyrus	89.83	0.00e+00	1415.00
IUUC-Pgr-103288	Puccinia graminis	30.30	1.00e-83	304.00
IUUC-Ptt-103808	Puccinia triticina	31.22	2.00e-84	307.00
IUUC-Pte-104205	Pyrenophora teres	30.15	4.00e-105	376.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.02	1.00e-95	344.00
IUUC-Rno-105617	Rattus norvegicus	87.83	0.00e+00	1378.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.56	3.00e-108	386.00
IUUC-Sha-107378	Sarcophilus harrisii	73.98	0.00e+00	1152.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	33.92	3.00e-121	429.00
IUUC-Spo-108361	Schizosaccharomyces pombe	34.05	1.00e-121	431.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.33	3.00e-114	406.00
IUUC-Smo-109257	Selaginella moellendorffii	39.58	5.00e-159	555.00
IUUC-Sit-110258	Setaria italica	37.65	9.00e-165	573.00
IUUC-Sly-111521	Solanum lycopersicum	37.73	3.00e-155	542.00
IUUC-Stu-112718	Solanum tuberosum	47.86	2.00e-34	137.00
IUUC-Sar-113586	Sorex araneus	81.36	5.00e-67	248.00
IUUC-Sbi-114768	Sorghum bicolor	38.41	3.00e-167	582.00
IUUC-Sre-115159	Sporisorium reilianum	34.03	3.00e-95	343.00
IUUC-Ssc-116342	Sus scrofa	68.73	0.00e+00	936.00
IUUC-Tgu-117320	Taeniopygia guttata	64.07	0.00e+00	1005.00
IUUC-Tru-118024	Takifugu rubripes	60.77	0.00e+00	983.00
IUUC-Tni-119971	Tetraodon nigroviridis	61.08	0.00e+00	989.00
IUUC-Tca-121248	Theobroma cacao	37.56	1.00e-157	550.00
IUUC-Tre-122079	Trichoderma reesei	30.87	1.00e-105	377.00
IUUC-Tvi-122554	Trichoderma virens	30.22	7.00e-105	375.00
IUUC-Tae-125865	Triticum aestivum	38.10	1.00e-161	563.00
IUUC-Tur-126436	Triticum urartu	37.24	4.00e-133	468.00
IUUC-Tme-126942	Tuber melanosporum	31.00	4.00e-107	382.00
IUUC-Tbe-128000	Tupaia belangeri	91.30	1.00e-85	311.00
IUUC-Ttr-128964	Tursiops truncatus	90.49	0.00e+00	1425.00
IUUC-Uma-129473	Ustilago maydis	32.06	3.00e-105	376.00
IUUC-Vda-129749	Verticillium dahliae	30.50	7.00e-98	351.00
IUUC-Vvi-131511	Vitis vinifera	39.15	2.00e-160	560.00
IUUC-Xtr-132816	Xenopus tropicalis	55.87	0.00e+00	900.00
IUUC-Xma-133672	Xiphophorus maculatus	62.16	0.00e+00	1025.00
IUUC-Yli-134602	Yarrowia lipolytica	35.10	1.00e-138	487.00
IUUC-Zma-135559	Zea mays	36.65	8.00e-157	547.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence